Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11434
- Subject:
- NM_175476.4
- Aligned Length:
- 1985
- Identities:
- 1099
- Gaps:
- 730
Alignment
Query 1 ATGTCCCTCGGTCAGTCGGCCTGTCTGTTCCTCTCTATAGCTCGGTCAAGGAGTGTGATGACTGGCGAGCAGAT 74
|||||.||.||||||||
Sbjct 1 ---------------------------------------------------------ATGACCGGGGAGCAGAT 17
Query 75 GGCTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAAGAAGCAGA 148
|||.|||||.||.|||.|..||||.||||||||.|||||.|||||.||.|||.|||||||||||||||||||||
Sbjct 18 GGCGGCCTTTCACCCACCCACCACTCCCAACCCCCTGGAAAGGCCAATTAAGGTGGGCTGGCTGAAGAAGCAGA 91
Query 149 GGTCCATCGTGAAGAACTGGCAGCAGAGGTACTTTGTGCTGAGGGCGCAGCAGCTCTACTACTACAAGGATGAA 222
|||||||||||||.||||||||||||.|||||||||||.||||.||.|||||.|||||||||||||||||.|||
Sbjct 92 GGTCCATCGTGAAAAACTGGCAGCAGCGGTACTTTGTGTTGAGAGCTCAGCAACTCTACTACTACAAGGACGAA 165
Query 223 GAGGACACGAAGCCCCAGGGCTGCATGTATCTACCAGGATGTACAATCAAGGAGATCGCCACAAACCCAGAAGA 296
||||||.|.|||||.|||||||||||||||||.|||||..|||||.||||.||.||.|||||||||||.|||||
Sbjct 166 GAGGACTCAAAGCCACAGGGCTGCATGTATCTGCCAGGCAGTACAGTCAAAGAAATTGCCACAAACCCCGAAGA 239
Query 297 AGCTGGGAAGTTTGTCTTTGAAATCATTCCAGCCTCATGGGACCAGAATCGCATGGGACAGGACTCCTATGTCC 370
|||||||||.||||||||||||.|.||||||||||||.|.||||||||.|||||.|||||.||||||||.||||
Sbjct 240 AGCTGGGAAATTTGTCTTTGAAGTTATTCCAGCCTCAAGTGACCAGAACCGCATTGGACAAGACTCCTACGTCC 313
Query 371 TCATGGCCAGCTCTCAGGCGGAGATGGAGGAGTGGGTTAAATTCCTCAGGAGAGTTGCTGGCACACCCTGTGGA 444
|||||||||||||.||||..||||||||||||||||||||.|||||||||||||||||||||||.||||.||||
Sbjct 314 TCATGGCCAGCTCCCAGGTAGAGATGGAGGAGTGGGTTAAGTTCCTCAGGAGAGTTGCTGGCACGCCCTCTGGA 387
Query 445 GCAGTGTTTGGCCAGCGCTTGGATGAGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT 518
||.||||||||||||||..||||||||||||||||||||||.|||||.||.|||||.||.||||||||||||.|
Sbjct 388 GCGGTGTTTGGCCAGCGTCTGGATGAGACTGTGGCCTATGAGCAGAAGTTTGGCCCTCACCTGGTGCCCATCTT 461
Query 519 GGTGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGGGCAGG 592
|||||||||.||.||.||||||||||||||.||.||...||.||||||||||||||||||.|||||.|||||||
Sbjct 462 GGTGGAGAAGTGCGCTGAGTTCATCCTGGAACATGGTGTGAGTGAAGAGGGCATCTTCCGCCTGCCCGGGCAGG 535
Query 593 ACAACCTGGTGAAGCAGCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGAGACACAGATGTG 666
|||||||.|||||||||||||||||.|||||.|||||.|||||||||||||||||||||||.||||||||||||
Sbjct 536 ACAACCTTGTGAAGCAGCTGAGAGATGCTTTCGATGCGGGGGAGCGGCCCTCCTTTGACAGGGACACAGATGTG 609
Query 667 CACACTGTGGCTTCCCTGTTAAAGCTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGA 740
|||||.|||||.||.||..||||||||||||||||||||||.||||||||.||||||||.|||||.|||||.||
Sbjct 610 CACACGGTGGCATCTCTACTAAAGCTCTACCTCCGAGACCTGCCAGAGCCTGTGGTTCCTTGGAGTCAGTATGA 683
Query 741 AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCT 814
||||||||||||||||||||||||||.|||.||.|||||||||||||||||||||||||||.||||||||||.|
Sbjct 684 AGGGTTCCTGCTCTGTGGGCAGCTCATGAACGCAGATGAGGCAAAGGCTCAGCAGGAGTTGGTGAAGCAGCTTT 757
Query 815 CCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAATACAGCTGAACTGT 888
|.|.||||||.||.||||||||.|..||||||||||||||||||||.||.||.||||||||.||||||||||||
Sbjct 758 CTACCCTTCCCCGAGACAACTACAACCTCCTGAGCTACATCTGCAGATTTCTGCATGAAATCCAGCTGAACTGT 831
Query 889 GCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAATCTCATCAGGTCGAAGGTCGAAGA 962
||.||.|||||||||||.||||||||||||||.||||||||.||.|||||.|||||||||||||||||.|||||
Sbjct 832 GCCGTCAACAAGATGAGCGTGGACAACCTGGCCACTGTGATCGGGGTGAACCTCATCAGGTCGAAGGTTGAAGA 905
Query 963 CCCTGCCGTGATCATGAGAGGGACTCCTCAGATCCAAAGAGTGATGACTATGATGATCAGAGACCATGAAGTCC 1036
|||.||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 906 CCCAGCTGTGATTATGAGAGGGACTCCTCAGATCCAAAGAGTGATGACCATGATGATCAGAGACCACGAAGTCC 979
Query 1037 TCTTCCCCAAGTCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAAAATGACCCCAAGAAAGCTCCAGTGGCC 1110
|||||||||||||.||||||..|||..|.||||||||||||||||||||.||..|||||||.|||||||||.|.
Sbjct 980 TCTTCCCCAAGTCTAAGGATGCACCGATCTCACCCCCTGCCCAGAAAAACGATGCCAAGAAGGCTCCAGTGCCG 1053
Query 1111 CGAAGCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAATTTCTAGGACAGACAGCTTCAGTAGCATGGTAAG 1184
|||||||||||.||.|||||||||||.|||||||..|...||||||||||||||||||||||||.||..|.|||
Sbjct 1054 CGAAGCTCTGTGGGGTGGGATGCCACGGAAGACCCACCCCTTTCTAGGACAGACAGCTTCAGTAACACAGCAAG 1127
Query 1185 GTGCAGAGAACCTTCCTGCTTCCATTGGGTTCTTCCTTTAGTCCAGGCCATCCCA-TGTAAGGC--CTGCTCTC 1255
..| |||||.|.||| |||| ||||| || |.| |||| |
Sbjct 1128 TAG----------TCCTGATGCCA------------------CCAG----TCCCACTG---GACCACTGC---C 1163
Query 1256 GGGTG----GCAATTTGGGGAGTTTTAGGTGATG-CAGTGG---------CAG----------------TGGGC 1299
..||| ||| |.|| ||.| |||.|| ||| |||..
Sbjct 1164 CAGTGACCAGCA------------TCAG--GAAGACAGCGGAAAAGCCCCCAGGGAAAACCCAGGAGACTGGAA 1223
Query 1300 GCTGC--TGC--TACA--GACTCATCTGAACAC------ACCTTGAAAG-----CCT---GGCCTCTTTCC--- 1350
|.||| |.| ||.| |||||| |||.| ||| |.||| ||| |.||.|.||||
Sbjct 1224 GATGCAATCCCGTAAAAGGACTCA----AACGCTTCCCAACC--GGAAGTGTTTCCTGACGTCCGCATTCCAAG 1291
Query 1351 ---------------------AAATCT---------AGTT----TCTATTGGCATCTT---------------- 1374
|||||| |||| ||| .||||||
Sbjct 1292 GCACCACCAGCAGTAAACTGGAAATCTTTAAAAATGAGTTCTGGTCT----CCATCTTCAGAGGCTAAGGCAGG 1361
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 1362 AGAAGGGCACAGGCGAACTATGTCCCAAGACTTGCGCCACCTTTCCAATGACCAGCGGACTTCTACCTACGATA 1435
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 1436 ATGTCCCCACCTCACCACAGTCCCAAGGGAACCCAGCAGGTGCACTCTCTCCCCCTGCCAGTGACTCCAAGAGA 1509
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 1510 GATGCTCTTGTTAGCACAGACTCTGAAATGGAGGCTGGAAGCAAGAACTCTGGCGAGGATGACCTTGATTCTCT 1583
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 1584 GCAGAGGACAGTCCAGAGCCTACAGAAGGAAATAGAAACCCAGAAGCAGGTCTATGAGGAACAGATTAAAAACC 1657
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 1658 TGGAGAAGGAAAATTACGATGTCTGGGCTAAGGTGGTGAGGCTCAATGAAGAACTCGAGAGGGAGAGGAAGAAA 1731
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 1732 TTCGCGGCCCTGGAAATCAGCCTTCGAAATGTGGAGCGCTCCCGGGAGGACGTTGAGAAGAGGAACAGAGTCTT 1805
Query 1375 ------------------------------------------------------------- 1374
Sbjct 1806 GGAAGAAGAAGTCAAGGAGTTTGTGAAGTCGATGGAGAAGCCCAAGACAAAGACGGATCCT 1866
