Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11435
Subject:
NR_134938.2
Aligned Length:
2906
Identities:
684
Gaps:
2222

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGGTAAAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCTGAGCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGTCAGGGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGATTCCCTTTAACTGGAACAGAGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCC  296

Query    1  ----------------------------------------------------------ATGGCTCCAGCAGGAA  16
                                                                      ||||||||||||||||
Sbjct  297  TCCAACCTTCAGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAA  370

Query   17  ATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAAT  90
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAAT  444

Query   91  AATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGT  164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGT  518

Query  165  ATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAG-------------  225
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  519  ATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGAGACTTAACTAAG  592

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct  593  CTTTTACTAGGTACCTGGTGCTGTTCTGGGTGCTTCTGATACAGCATTAAACAAGGCAGAAAAGAGTACCCTCA  666

Query  226  --------------------------------GTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTAT  267
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGGAGCATGCATTATAGTGGAGGAGATACCTAGTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTAT  740

Query  268  AAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGA  341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGA  814

Query  342  AGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGG  415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGG  888

Query  416  TGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGAT  489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGAT  962

Query  490  TTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGAT  563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGAT  1036

Query  564  CATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAG  637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAG  1110

Query  638  AACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC---------------------------  684
            |||||||||||||||||||||||||||||||||||||||||||||||                           
Sbjct 1111  AACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTTATCTCAAGATGTGTCATAC  1184

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1185  CGTCTGTAATGAAGCAGGCACACACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCC  1258

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1259  TAAATTTATGACTAAAAATTCCCCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAG  1332

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1333  GAACTAATTATTAAGGGAGCTTTGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGC  1406

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1407  CCACAGATGACACTGCATTTGTATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCC  1480

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1481  AAACCATGCATTGTCTGTGATGTATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGAC  1554

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1555  CTGAATTGGTCTTGGAGGCAGCTTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTC  1628

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1629  TTTTTTCTCCTCTCATGAATCTGCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGC  1702

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1703  TCATTAAATGTGTTCTATATACTAGGCTCAGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATA  1776

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1777  CACTATCCCCATTTTACCTGTGAGAAAATTGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCA  1850

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1851  AAGTAGTCATCCACAAAGTATGAGGCAGACAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTT  1924

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1925  CTGACATGGATGGTGGCTTTTTACTCAGAAATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCT  1998

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1999  TGGCAAGAAGAGTCTGGTTTCTCGTCTGCTATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCC  2072

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2073  TTAGCTCTGTGGAAAGAGACAGTCAGGAATATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCC  2146

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2147  CATGCTTGCCTCCAGAGATACAGTTCTTTTAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGT  2220

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2221  GAGCTTTTTGTTCTTAAGATTAAGAAACCTATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCT  2294

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2295  CAGCACTTTGGGAAATCGAGGTGGGTGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGA  2368

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2369  AACCCTATCTTTACAAAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGG  2442

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2443  AGGCTGAAATGGGAGGATTGCTTGAGCCTGGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCC  2516

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2517  AGCCTGGGCCACAGAGGGAGACCCTGTCTCAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCAC  2590

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2591  TAGCTTATTATTTGCTTCCTGTGTGCCTGCTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGC  2664

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2665  ATTCCTAGGGGAAATTGTGGCTGTTTTTCTGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGG  2738

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2739  ACTATCCTGAGTATTGTCAGTAAAACGTCTTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCT  2812

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2813  GTCTTTTCCGAGTGGTATTACAAGAAAGATTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGA  2886

Query  685  --------------------  684
                                
Sbjct 2887  TAAAGATAAGATGATAATGA  2906

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