Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11435
- Subject:
- NR_134938.2
- Aligned Length:
- 2906
- Identities:
- 684
- Gaps:
- 2222
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGTAAAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTGAGCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTCAGGGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGATTCCCTTTAACTGGAACAGAGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCC 296
Query 1 ----------------------------------------------------------ATGGCTCCAGCAGGAA 16
||||||||||||||||
Sbjct 297 TCCAACCTTCAGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAA 370
Query 17 ATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAAT 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAAT 444
Query 91 AATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGT 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGT 518
Query 165 ATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAG------------- 225
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGAGACTTAACTAAG 592
Query 226 -------------------------------------------------------------------------- 225
Sbjct 593 CTTTTACTAGGTACCTGGTGCTGTTCTGGGTGCTTCTGATACAGCATTAAACAAGGCAGAAAAGAGTACCCTCA 666
Query 226 --------------------------------GTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTAT 267
||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGAGCATGCATTATAGTGGAGGAGATACCTAGTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTAT 740
Query 268 AAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGA 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGA 814
Query 342 AGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGG 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGG 888
Query 416 TGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGAT 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGAT 962
Query 490 TTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGAT 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGAT 1036
Query 564 CATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAG 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAG 1110
Query 638 AACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC--------------------------- 684
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTTATCTCAAGATGTGTCATAC 1184
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1185 CGTCTGTAATGAAGCAGGCACACACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCC 1258
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1259 TAAATTTATGACTAAAAATTCCCCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAG 1332
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1333 GAACTAATTATTAAGGGAGCTTTGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGC 1406
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1407 CCACAGATGACACTGCATTTGTATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCC 1480
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1481 AAACCATGCATTGTCTGTGATGTATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGAC 1554
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1555 CTGAATTGGTCTTGGAGGCAGCTTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTC 1628
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1629 TTTTTTCTCCTCTCATGAATCTGCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGC 1702
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1703 TCATTAAATGTGTTCTATATACTAGGCTCAGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATA 1776
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1777 CACTATCCCCATTTTACCTGTGAGAAAATTGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCA 1850
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1851 AAGTAGTCATCCACAAAGTATGAGGCAGACAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTT 1924
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1925 CTGACATGGATGGTGGCTTTTTACTCAGAAATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCT 1998
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1999 TGGCAAGAAGAGTCTGGTTTCTCGTCTGCTATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCC 2072
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2073 TTAGCTCTGTGGAAAGAGACAGTCAGGAATATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCC 2146
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2147 CATGCTTGCCTCCAGAGATACAGTTCTTTTAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGT 2220
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2221 GAGCTTTTTGTTCTTAAGATTAAGAAACCTATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCT 2294
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2295 CAGCACTTTGGGAAATCGAGGTGGGTGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGA 2368
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2369 AACCCTATCTTTACAAAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGG 2442
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2443 AGGCTGAAATGGGAGGATTGCTTGAGCCTGGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCC 2516
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2517 AGCCTGGGCCACAGAGGGAGACCCTGTCTCAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCAC 2590
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2591 TAGCTTATTATTTGCTTCCTGTGTGCCTGCTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGC 2664
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2665 ATTCCTAGGGGAAATTGTGGCTGTTTTTCTGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGG 2738
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2739 ACTATCCTGAGTATTGTCAGTAAAACGTCTTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCT 2812
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2813 GTCTTTTCCGAGTGGTATTACAAGAAAGATTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGA 2886
Query 685 -------------------- 684
Sbjct 2887 TAAAGATAAGATGATAATGA 2906
