Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11435
- Subject:
- NR_153323.1
- Aligned Length:
- 3619
- Identities:
- 684
- Gaps:
- 2935
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCTTGGCGGGCGGTGAGGCGTGGGGTGACGGGGGGATGGCGGGGGCCGGCATGCGCGCGCATGCGCCGTGGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATTTGGATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCTTTAACTGGAACAGAGGCAAGGTGTTACACTAATCACGCTTTGTCTTATGATCAGGCAAAGCGGGTGCCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATGGGTTCTTGAACATATTTCCAAAAGCAAGATAATGGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCT 444
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 445 GATCCCAATATCCCTCCAACCTTCAGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACAT 518
Query 3 GGCTCCAGCAGGAAATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCTCCAGCAGGAAATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTC 592
Query 77 AGGATTTTGATAATAATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGATTTTGATAATAATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAA 666
Query 151 GATGTTTGGGTGGTATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTAC-- 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GATGTTTGGGTGGTATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCA 740
Query 223 -------------------------------------------------------------------------- 222
Sbjct 741 GAGCTGGGAGTACCCAAGCCTGCAGTTTTGACCTTTGAATGTTTGGAGCACCAGAAGTTCTGATTATGAGATGA 814
Query 223 -------------------------------------------------------------------------- 222
Sbjct 815 AGAGAAAATGACAGCTTTTCTTGTCTATTAAAAAACCAGGACTCACTCATGGCATTCCTTTGTCCTTTGTCCTA 888
Query 223 -------------------------------------------------------------------------- 222
Sbjct 889 CAAACAGAACAGAGACTGTGACCCCTGATCTTTGGGTTGGCATTATTTTATTTTTATTTTTTGAGGTGGAGTCT 962
Query 223 -------------------------------------------------------------------------- 222
Sbjct 963 TGCTCTGTCGGCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCACCCTCTGCCTCCTGGGTTCAAGCA 1036
Query 223 -------------------------------------------------------------------------- 222
Sbjct 1037 ATTCTTCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCACACCCAGCTAATTTTTGTATTT 1110
Query 223 -------------------------------------------------------------------------- 222
Sbjct 1111 TTTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTGCCCG 1184
Query 223 ---------------------------CAGGTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTATAA 269
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCTTGGCGTCCCAAAGTGCTGGGATTACAGGTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTATAA 1258
Query 270 GGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGAAG 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGAAG 1332
Query 344 CCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGGTG 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGGTG 1406
Query 418 TTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGATTT 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGATTT 1480
Query 492 CCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGATCA 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGATCA 1554
Query 566 TGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAGAA 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAGAA 1628
Query 640 CTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC----------------------------- 684
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTTATCTCAAGATGTGTCATACCG 1702
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1703 TCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTAGTGGCTTTGCTTTTTGCTTTTTAAAAAGTT 1776
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1777 TTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGAGTGCAGTGGTGGAATCATAGCTCACTATAG 1850
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1851 CCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCTGAGCAGCTGGGACTACAGGCACACACCATC 1924
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1925 ACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCCTAAATTTATGACTAAAAATTCCCCCAAAA 1998
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1999 GATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAGGAACTAATTATTAAGGGAGCTTTGACACC 2072
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2073 TGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGCCCACAGATGACACTGCATTTGTATCCCTG 2146
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2147 TGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCCAAACCATGCATTGTCTGTGATGTATCTGC 2220
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2221 CCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGACCTGAATTGGTCTTGGAGGCAGCTTTTAGA 2294
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2295 AATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTCTTTTTTCTCCTCTCATGAATCTGCTCGTT 2368
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2369 TCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGCTCATTAAATGTGTTCTATATACTAGGCTC 2442
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2443 AGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATACACTATCCCCATTTTACCTGTGAGAAAAT 2516
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2517 TGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCAAAGTAGTCATCCACAAAGTATGAGGCAGA 2590
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2591 CAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTTCTGACATGGATGGTGGCTTTTTACTCAGA 2664
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2665 AATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCTTGGCAAGAAGAGTCTGGTTTCTCGTCTGC 2738
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2739 TATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCCTTAGCTCTGTGGAAAGAGACAGTCAGGAA 2812
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2813 TATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCCCATGCTTGCCTCCAGAGATACAGTTCTTT 2886
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2887 TAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGTGAGCTTTTTGTTCTTAAGATTAAGAAACC 2960
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2961 TATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCTCAGCACTTTGGGAAATCGAGGTGGGTGGA 3034
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3035 TCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGAAACCCTATCTTTACAAAAAAATACAAAAA 3108
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3109 TTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAAATGGGAGGATTGCTTGAGCCT 3182
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3183 GGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCCAGCCTGGGCCACAGAGGGAGACCCTGTCT 3256
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3257 CAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCACTAGCTTATTATTTGCTTCCTGTGTGCCTG 3330
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3331 CTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGCATTCCTAGGGGAAATTGTGGCTGTTTTTC 3404
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3405 TGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGGACTATCCTGAGTATTGTCAGTAAAACGTC 3478
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3479 TTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCTGTCTTTTCCGAGTGGTATTACAAGAAAGA 3552
Query 685 ------------------------------------------------------------------- 684
Sbjct 3553 TTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGATAAAGATAAGATGATAATGATT 3619
