Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11435
Subject:
NR_153329.1
Aligned Length:
3270
Identities:
684
Gaps:
2586

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCTTGGCGGGCGGTGAGGCGTGGGGTGACGGGGGGATGGCGGGGGCCGGCATGCGCGCGCATGCGCCGTGGTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGATTGTTAGCTCCATAAGACTTGAGACTATGTCTGTTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGTCTCCATCATCTAACCAGCACAGTACCTGGTACATAATTGGCATTCAGATCTGCAGAAAAGGCTGTCTTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AACAATTTGGATTCCCTTTAACTGGAACAGAGGTAGATTCTTCAAGTTTACACTCCTAGCATCATTGTTTCTTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCTCTCTCAACCTTCACCTATGGCTGGTCTTGAATTTCTGGGTTCAAGTGACCCTCCTGCCTCAGCCTCCTGAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAGCTGGGATTACAGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCCTCCAACCTTC  592

Query    1  ------------------------------------------------ATGGCTCCAGCAGGAAATAACAAATT  26
                                                            ||||||||||||||||||||||||||
Sbjct  593  AGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAAATAACAAATT  666

Query   27  TTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGAT  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGAT  740

Query  101  ATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCT  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCT  814

Query  175  TTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGACAACGTGGC  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGACAACGTGGC  888

Query  249  AGTCCCCTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGG  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGTCCCCTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGG  962

Query  323  CCTTTGTGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTA  396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTTTGTGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTA  1036

Query  397  GAGAAGTTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGA  470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GAGAAGTTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGA  1110

Query  471  CACCTGTAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAG  544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CACCTGTAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAG  1184

Query  545  TGCTCAGACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGC  618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGCTCAGACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGC  1258

Query  619  TATGAGAAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC--------  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct 1259  TATGAGAAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTT  1332

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1333  ATCTCAAGATGTGTCATACCGTCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTAGTGGCTTTG  1406

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1407  CTTTTTGCTTTTTAAAAAGTTTTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGAGTGCAGTGG  1480

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1481  TGGAATCATAGCTCACTATAGCCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCTGAGCAGCTG  1554

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1555  GGACTACAGGCACACACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCCTAAATTTA  1628

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1629  TGACTAAAAATTCCCCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAGGAACTAAT  1702

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1703  TATTAAGGGAGCTTTGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGCCCACAGAT  1776

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1777  GACACTGCATTTGTATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCCAAACCATG  1850

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1851  CATTGTCTGTGATGTATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGACCTGAATTG  1924

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1925  GTCTTGGAGGCAGCTTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTCTTTTTTCT  1998

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1999  CCTCTCATGAATCTGCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGCTCATTAAA  2072

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2073  TGTGTTCTATATACTAGGCTCAGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATACACTATCC  2146

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2147  CCATTTTACCTGTGAGAAAATTGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCAAAGTAGTC  2220

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2221  ATCCACAAAGTATGAGGCAGACAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTTCTGACATG  2294

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2295  GATGGTGGCTTTTTACTCAGAAATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCTTGGCAAGA  2368

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2369  AGAGTCTGGTTTCTCGTCTGCTATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCCTTAGCTCT  2442

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2443  GTGGAAAGAGACAGTCAGGAATATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCCCATGCTTG  2516

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2517  CCTCCAGAGATACAGTTCTTTTAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGTGAGCTTTT  2590

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2591  TGTTCTTAAGATTAAGAAACCTATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCTCAGCACTT  2664

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2665  TGGGAAATCGAGGTGGGTGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGAAACCCTAT  2738

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2739  CTTTACAAAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAA  2812

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2813  ATGGGAGGATTGCTTGAGCCTGGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCCAGCCTGGG  2886

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2887  CCACAGAGGGAGACCCTGTCTCAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCACTAGCTTAT  2960

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2961  TATTTGCTTCCTGTGTGCCTGCTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGCATTCCTAG  3034

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3035  GGGAAATTGTGGCTGTTTTTCTGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGGACTATCCT  3108

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3109  GAGTATTGTCAGTAAAACGTCTTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCTGTCTTTTC  3182

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3183  CGAGTGGTATTACAAGAAAGATTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGATAAAGATA  3256

Query  685  --------------  684
                          
Sbjct 3257  AGATGATAATGATT  3270

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