Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11488
- Subject:
- XM_005256940.4
- Aligned Length:
- 4863
- Identities:
- 615
- Gaps:
- 4248
Alignment
Query 1 ATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTTATTATGCAAGAACTTTCTTAAAAAATGGAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AATGAAAAGAGAGTCCTTAATGGAATGGCTGAATTCATTGCTCCTACTACTTTGTTTGTATATATATCCTCATA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTCATCAAGTAAATGATTTTTCTTCACTGCTTACCATGGACCTGGGACGGGTAGATACATTTAATGAATCCAGA 222
|||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------------------ATGGACCTGGGACGGGTAGATACATTTAATGAATCCAGA 39
Query 223 TTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCTCTACTCCCTTCCT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 40 TTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCTCTACTCCCTTCCT 113
Query 297 GGCAGGTAAAGAGGTCTTGGGACTGCCAGATGAGGAAAGTATTAAAGAATTCACAGCAAATTATCCTGAAGAAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 114 GGCAGGTAAAGAGGTCTTGGGACTGCCAGATGAGGAAAGTATTAAAGAATTCACAGCAAATTATCCTGAAGAAA 187
Query 371 TAGTAAGAGTCACCTTTACTAATACATACTCATATCATTTGAAGTTCTTGCTAGGACATGGAATGCCAGCAAAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 TAGTAAGAGTCACCTTTACTAATACATACTCATATCATTTGAAGTTCTTGCTAGGACATGGAATGCCAGCAAAG 261
Query 445 AAGGAGCACAAGGACCATACAGCTCATTGTTATGAAACAAATGAAGATGTTTACTGTGAAGTTTCAGTATTTTG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 AAGGAGCACAAGGACCATACAGCTCATTGTTATGAAACAAATGAAGATGTTTACTGTGAAGTTTCAGTATTTTG 335
Query 519 GAAGGAAGGTTTTGTGGCTCTTCAAGCTGCCATTAATGCTGCTATTATAGAAATCACAACAAATCACTCAGTGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 GAAGGAAGGTTTTGTGGCTCTTCAAGCTGCCATTAATGCTGCTATTATAGAAATCACAACAAATCACTCAGTGA 409
Query 593 TGGAGGAGCTGATGTCAGTTACTGGAAAAAATATGAAGATGCATTCCTTCATTGGTCAATCAGGAGTTATAACT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 TGGAGGAGCTGATGTCAGTTACTGGAAAAAATATGAAGATGCATTCCTTCATTGGTCAATCAGGAGTTATAACT 483
Query 667 GATTTGTACCTTTTTTCCTGCATTATTTCATTTTCCTCATTCATTTACTATGCATCTGTTAATGTCACAAGAGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 GATTTGTACCTTTTTTCCTGCATTATTTCATTTTCCTCATTCATTTACTATGCATCTGTTAATGTCACAAGAGA 557
Query 741 GAGGAAAAGGATGAAGGCCTTGATGACAATGATGGGTCTTCGGGATTCAGCGTTCTGG---------------- 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 GAGGAAAAGGATGAAGGCCTTGATGACAATGATGGGTCTTCGGGATTCAGCGTTCTGGCTCTCCTGGGGTTTGC 631
Query 799 -------------------------------------------------------------------------- 798
Sbjct 632 TCTATGCTGGTTTCATCTTCATTATGGCCCTTTTCTTGGCACTTGTTATAAGATCTACCCAGTTTATCATTTTG 705
Query 799 -------------------------------------------------------------------------- 798
Sbjct 706 TCTGGCTTCATGGTAGTCTTCAGCCTCTTTCTCCTGTATGGATTATCTTTGGTAGCTTTGGCTTTCTTAATGAG 779
Query 799 -------------------------------------------------------------------------- 798
Sbjct 780 CATCTTGGTAAAGAAATCTTTCCTCACCGGCCTGGTCGTGTTCCTCCTCACTGTCTTTTGGGGGTGTCTGGGGT 853
Query 799 -------------------------------------------------------------------------- 798
Sbjct 854 TCACATCACTGTACAGACACCTTCCTGCATCCTTGGAGTGGATTTTAAGCTTGCTTAGTCCCTTTGCCTTCATG 927
Query 799 -------------------------------------------------------------------------- 798
Sbjct 928 CTTGGAATGGCCCAGCTTTTACACTTGGACTATGATTTGAATTCTAATGCATTTCCTCATCCATCGGACGGCTC 1001
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1002 AAATCTCATTGTAGCAACAAATTTCATGTTGGCATTTGACACTTGCCTCTATCTGGCATTGGCGATTTACTTTG 1075
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1076 AAAAAATTTTGCCAAATGAATATGGACATCGACGTCCACCTTTGTTTTTCCTGAAGTCCTCATTTTGGTCTCAA 1149
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1150 ACACAAAAGACTGATCACGTGGCCCTTGAAGATGAAATGGATGCCGATCCTTCATTTCATGACTCTTTTGAACA 1223
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1224 AGCGCCTCCAGAATTCCAAGGGAAAGAAGCCATCAGAATCAGAAATGTTACAAAAGAATATAAAGGAAAGCCTG 1297
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1298 ATAAAATAGAAGCCTTGAAAGATCTGGTATTTGACATTTACGAAGGCCAAATCACTGCAATACTTGGTCACAGT 1371
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1372 GGAGCTGGAAAGTCAACACTGCTAAACATTCTTAGTGGGTTGTCTGTTCCCACCAAAGGTTCAGTCACCATCTA 1445
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1446 TAACAATAAGCTTTCAGAAATGGCTGACCTAGAAAATCTCAGCAAGCTGACCGGAGTTTGTCCACAATCCAATG 1519
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1520 TGCAATTTGACTTCCTCACTGTAAGAGAAAACCTCAGACTCTTTGCTAAAATAAAAGGGATTCTGCCACAAGAA 1593
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1594 GTGGATAAAGAGATACAAAGGGTTCTGCTGGAATTGGAAATGAAAAATATTCAGGATGTTCTTGCTCAAAACTT 1667
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1668 AAGTGGTGGACAGAAAAGAAAGCTAACCTTTGGGATTGCCATTTTAGGAGATCCTCAGATTTTCCTGTTGGATG 1741
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1742 AACCAACTGCTGGATTGGATCCCTTTTCAAGACACCAAGTATGGAACCTTCTGAAAGAACGCAAAACAGACCGC 1815
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1816 GTGATCCTCTTCAGTACCCAGTTCATGGATGAGGCCGACATCCTGGCGGACAGGAAAGTATTTCTCTCCCAAGG 1889
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1890 GAAGCTAAAGTGCGCGGGCTCTTCTTTGTTTCTAAAGAAGAAATGGGGGATTGGATATCACTTAAGCTTGCAGT 1963
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1964 TAAATGAAATATGTGTTGAGGAAAACATAACATCACTTGTTAAACAGCACATCCCTGATGCCAAATTATCAGCC 2037
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2038 AAAAGCGAAGGAAAACTTATTTATACATTACCCTTAGAAAGAACAAATAAATTTCCAGAACTTTACAAGGATCT 2111
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2112 TGATAGCTATCCTGACCTAGGAATTGAGAATTATGGTGTTTCCATGACAACTTTGAATGAAGTATTCCTGAAGC 2185
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2186 TAGAAGGAAAATCTACAATTAATGAATCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGAC 2259
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2260 ACTGAAAGGCTTGTTGAGATGGAACAAGTCCTCTCTTCACTTAACAAGATGAGAAAGACAATAGGTGGTGTGGC 2333
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2334 TCTCTGGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGCTTGTTAAAGTTAAAGCATGAAAGAAAAGCTCTTT 2407
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2408 TAGCACTGCTATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAAAATATATCAA 2481
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2482 AACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGACAACAACCACATGACCCTCTCAC 2555
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2556 TCAACTACTGATCATCAATAAAACAGGGGCAAGCATTGATGACTTTATACAGTCTGTGGAGCACCAGAACATAG 2629
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2630 CTTTAGAAGTGGATGCATTTGGAACTAGAAATGGCACAGATGACCCATCTTATAATGGAGCCATCACAGTGTGT 2703
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2704 TGTAATGAAAAGAATTACAGCTTTTCGTTAGCATGCAATGCCAAAAGATTGAATTGCTTCCCAGTTCTTATGGA 2777
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2778 CATTGTTAGTAATGGGCTACTTGGAATGGTTAAACCATCAGTACATATCCGAACTGAAAGAAGTACATTTTTGG 2851
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2852 AGAATGGACAGGACAATCCAATCGGATTCCTGGCATATATCATGTTCTGGCTGGTTTTAACATCGAGTTGCCCA 2925
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2926 CCTTACATTGCCATGAGCAGCATCGATGATTATAAGAACAGAGCTCGGTCCCAGCTACGGATTTCCGGACTCTC 2999
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3000 CCCTTCTGCTTACTGGTTTGGGCAGGCGCTGGTGGATGTTTCCCTGTACTTCTTGGTCTTCGTTTTTATATATT 3073
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3074 TAATGAGCTACATTTCAAACTTCGAAGACATGCTACTTACAATAATTCATATTATTCAAATCCCATGTGCTGTT 3147
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3148 GGTTATTCCTTTTCCCTCATCTTCATGACATACGTGATTTCCTTCATCTTTCGCAAGGGGAGAAAAAATAGTGG 3221
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3222 CATTTGGTCATTTTGTTTCTATGTTGTCACTGTATTCTCTGTGGCTGGATTTGCGTTCAGTATCTTCGAAAGTG 3295
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3296 ATATTCCATTTATCTTCACTTTTTTAATACCACCTGCCACAATGATTGGCTGTTTGTTCTTATCTTCTCATCTT 3369
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3370 CTCTTTTCTTCTCTCTTTTCTGAAGAACGAATGGATGTACAGCCATTTCTGGTATTCCTAATTCCTTTCCTTCA 3443
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3444 TTTTATCATTTTTCTTTTTACTCTTCGATGTCTGGAATGGAAGTTTGGAAAGAAATCAATGAGAAAGGATCCTT 3517
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3518 TCTTTAGAATTTCTCCAAGAAGTAGTGATGTGTGTCAAAATCCAGAAGAACCAGAAGGAGAGGATGAAGATGTT 3591
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3592 CAGATGGAAAGAGTGAGAACAGCAAATGCCTTGAATTCTACTAATTTTGATGAGAAGCCAGTCATCATTGCCAG 3665
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3666 CTGTCTACGCAAGGAGTATGCAGGGAAGAGGAAAGGCTGTTTTTCCAAGAGGAAGAATAAGATAGCCACGAGAA 3739
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3740 ATGTCTCCTTCTGTGTTAGAAAAGGTGAAGTTTTAGGATTATTAGGACACAATGGAGCTGGTAAAAGCACATCC 3813
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3814 ATTAAGGTGATAACTGGAGACACAAAACCAACTGCTGGACAAGTGCTACTGAAAGGGAGCGGTGGAGGGGATGC 3887
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3888 CCTGGAGTTCCTGGGGTACTGCCCTCAGGAGAACGCGCTGTGGCCCAACCTGACAGTGAGGCAGCACCTGGAGG 3961
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3962 TGTACGCCGCCGTGAAAGGGCTGAGGAAAGGGGATGCTGAGGTTGCCATCACACGGTTAGTGGATGCGCTCAAG 4035
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4036 CTGCAGGACCAGCTGAAGTCTCCCGTGAAGACCTTGTCAGAGGGAATAAAGAGAAAGCTGTGCTTTGTCCTGAG 4109
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4110 CATACTGGGGAACCCGTCAGTGGTGCTTCTGGATGAGCCGTCGACCGGGATGGACCCCGAGGGGCAGCAGCAAA 4183
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4184 TGTGGCAGGCCATCCGGGCCACCTTTAGAAACACGGAAAGGGGTGCCCTCCTAACCACCCACTACATGGCAGAG 4257
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4258 GCTGAGGCCGTGTGTGACCGAGTGGCCATCATGGTATCTGGGAGGTTGAGATGTATCGGTTCCATCCAACACCT 4331
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4332 GAAAAGCAAATTTGGCAAAGATTACCTGCTGGAGATGAAGGTGAAGAACCTGGCACAAGTGGAGCCCCTCCATG 4405
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4406 CAGAGATCCTGAGGCTTTTCCCCCAGGCTGCTCGGCAGGAAAGGTACTCCTCTCTGATGGTTTATAAGTTGCCA 4479
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4480 GTGGAAGATGTGCAACCTTTAGCCCAAGCTTTCTTCAAATTAGAGAAGGTTAAACAGAGCTTTGACCTAGAGGA 4553
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4554 GTACAGCCTCTCACAGTCTACCCTGGAGCAGGTTTTCCTGGAGCTCTCCAAGGAGCAGGAGCTGGGTGATTTTG 4627
Query 799 ----------------------------------------------------- 798
Sbjct 4628 AGGAGGATTTTGATCCCTCAGTGAAGTGGAAGCTCCTCCCCCAGGAAGAGCCT 4680
