Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11496
- Subject:
- NM_006322.6
- Aligned Length:
- 2728
- Identities:
- 1265
- Gaps:
- 1433
Alignment
Query 1 ATGGCGACCCCGGACCAGAAGTCGCCGAACGTTCTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACCCCGGACCAGAAGTCGCCGAACGTTCTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGA 74
Query 75 AGCTGATGTAGCCCAGCAGTTCCAGTATGCTGTGCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGCTGATGTAGCCCAGCAGTTCCAGTATGCTGTGCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAG 148
Query 149 ATGAATTTTTAGTAGCTGAAAAAATCAAGAAAGAGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGAATTTTTAGTAGCTGAAAAAATCAAGAAAGAGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTT 222
Query 223 TCAGAACTCCACAGAAAACTTCATTCACAGGGAGTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCAGAACTCCACAGAAAACTTCATTCACAGGGAGTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAG 296
Query 297 CCTCAGTGAGGACCCACGCAGGCAGCCAAGCAAGGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTCAGTGAGGACCCACGCAGGCAGCCAAGCAAGGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAA 370
Query 371 GAGATGCCCACTCAACCCCTTACTACTATGCCAGGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGATGCCCACTCAACCCCTTACTACTATGCCAGGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCC 444
Query 445 CAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGCAGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGCAGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCC 518
Query 519 CGCGCCTGCGCCACAATCTCTCCTCCCAGGACAGTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGCGCCTGCGCCACAATCTCTCCTCCCAGGACAGTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGC 592
Query 593 AGTTGGGGTCACGACTCGCATGGACTTTAACTGCAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGTTGGGGTCACGACTCGCATGGACTTTAACTGCAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTC 666
Query 667 CCCAGTGCTGTGTCTCGCAACATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCAGTGCTGTGTCTCGCAACATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA 740
Query 741 AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG 814
Query 815 AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG 888
Query 889 TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG 962
Query 963 GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGC 1036
Query 1037 TACAACTAGAGGATGACCAGGGTGTGAATTTGGGACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TACAACTAGAGGATGACCAGGGTGTGAATTTGGGACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGG 1110
Query 1111 ACCTATGATCCCAAAATACGACTGAAGACCCTTGCGGCCCTAGTGGACCACTGCCAAGG--------------- 1169
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACCTATGATCCCAAAATACGACTGAAGACCCTTGCGGCCCTAGTGGACCACTGCCAAGGAAGGAAAGGAGGTGA 1184
Query 1170 -------TC------CCACGC---------------------------GCG---TCTTTCCCACGCACGTCTTT 1200
|| |||||| ||| |||....|| ||||.||
Sbjct 1185 GCTGGCCTCAGCTGTCCACGCCTACACAAAAACAGGAGACCCGTACATGCGGTCTCTGGTGCA-GCACATC--- 1254
Query 1201 CCCA--CGCGCGACT---------------TTCC--CACGCGC------------------------GAC-TTT 1230
|.|| |.||.|.|| |||| .|| ||| ||| .||
Sbjct 1255 CTCAGCCTCGTGTCTCATCCTGTTTTGAGCTTCCTGTAC-CGCTGGATATATGATGGGGAGCTTGAGGACACTT 1327
Query 1231 CCCATGCACGTCTT-----------TCCCAC----------GCGCGTCTTTCCCACG-CGCGTCT-------GG 1275
.|||.|.|..|.|| |||.|| |..||.||.|..|||| |..||.| ||
Sbjct 1328 ACCACGAATTTTTTGTAGCATCAGATCCAACAGTTAAAACAGATCGACTGTGGCACGACAAGTATACTTTGAGG 1401
Query 1276 CACTCG-------CTTTGTT------------TCA------GAA----CTCGTTTG------------------ 1302
.|.||| |||.||| ||| ||| || ||||
Sbjct 1402 AAATCGATGATTCCTTCGTTTATGACGATGGATCAGTCTAGGAAGGTCCT--TTTGATAGGAAAATCAATAAAT 1473
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1474 TTCTTGCACCAAGTTTGTCATGATCAGACTCCCACTACAAAGATGATAGCTGTGACCAAGTCTGCAGAGTCACC 1547
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1548 CCAGGACGCTGCAGACCTATTCACAGACTTGGAAAATGCATTTCAGGGGAAGATTGATGCTGCTTATTTTGAGA 1621
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1622 CCAGCAAATACCTGTTGGATGTTCTCAATAAAAAGTACAGCTTGCTGGACCACATGCAGGCAATGAGGCGGTAC 1695
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1696 CTGCTTCTTGGTCAAGGAGACTTTATAAGGCACTTAATGGACTTGCTAAAACCAGAACTTGTCCGTCCAGCTAC 1769
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1770 GACTTTGTATCAGCATAACTTGACTGGAATTCTAGAAACCGCTGTCAGAGCCACCAACGCACAGTTTGACAGTC 1843
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1844 CTGAGATCCTGCGAAGGCTGGACGTGCGGCTGCTGGAGGTCTCTCCAGGTGACACTGGATGGGATGTCTTCAGC 1917
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1918 CTCGATTATCATGTTGACGGACCAATTGCAACTGTGTTTACTCGAGAATGTATGAGCCACTACCTAAGAGTATT 1991
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1992 TAACTTCCTCTGGAGGGCGAAGCGGATGGAATACATCCTCACTGACATACGGAAGGGACACATGTGCAATGCAA 2065
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2066 AGCTCCTGAGAAACATGCCAGAGTTCTCCGGGGTGCTGCACCAGTGTCACATTTTGGCCTCTGAGATGGTCCAT 2139
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2140 TTCATTCATCAGATGCAGTATTACATCACATTTGAGGTGCTTGAATGTTCTTGGGATGAGCTTTGGAACAAAGT 2213
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2214 CCAGCAGGCCCAGGATTTGGATCACATCATTGCTGCACACGAGGTGTTCTTAGACACCATCATCTCCCGCTGCC 2287
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2288 TGCTGGACAGTGACTCCAGGGCACTTTTAAATCAACTTAGAGCTGTGTTTGATCAAATTATTGAACTTCAGAAT 2361
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2362 GCTCAAGATGCAATATACAGAGCTGCTCTGGAAGAATTGCAGAGACGATTACAGTTTGAAGAGAAAAAGAAACA 2435
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2436 GCGTGAAATTGAGGGCCAGTGGGGAGTGACGGCAGCAGAGGAAGAGGAGGAAAATAAGAGGATTGGAGAATTTA 2509
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2510 AAGAATCTATACCAAAAATGTGCTCACAGTTGCGAATATTGACCCATTTCTACCAGGGTATCGTGCAGCAGTTT 2583
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2584 TTGGTGTTACTGACGACCAGCTCTGACGAGAGTCTTCGGTTTCTTAGCTTCAGGCTGGACTTCAACGAGCATTA 2657
Query 1303 ---------------------------------------------------------------- 1302
Sbjct 2658 CAAAGCCAGGGAGCCCAGGCTCCGTGTGTCTCTGGGTACCAGGGGGCGGCGCAGCTCCCACACG 2721
