Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11496
- Subject:
- XM_011537462.2
- Aligned Length:
- 2453
- Identities:
- 1229
- Gaps:
- 1183
Alignment
Query 1 ATGGCGACCCCGGACCAGAAGTCGCCGAACGTTCTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACCCCGGACCAGAAGTCGCCGAACGTTCTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGA 74
Query 75 AGCTGATGTAGCCCAGCAGTTCCAGTATGCTGTGCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGCTGATGTAGCCCAGCAGTTCCAGTATGCTGTGCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAG 148
Query 149 ATGAATTTTTAGTAGCTGAAAAAATCAAGAAAGAGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGAATTTTTAGTAGCTGAAAAAATCAAGAAAGAGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTT 222
Query 223 TCAGAACTCCACAGAAAACTTCATTCACAGGGAGTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCAGAACTCCACAGAAAACTTCATTCACAGGGAGTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAG 296
Query 297 CCTCAGTGAGGACCCACGCAGGCAGCCAAGCAAGGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTCAGTGAGGACCCACGCAGGCAGCCAAGCAAGGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAA 370
Query 371 GAGATGCCCACTCAACCCCTTACTACTATGCCAGGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGATGCCCACTCAACCCCTTACTACTATGCCAGGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCC 444
Query 445 CAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGCAGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGCAGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCC 518
Query 519 CGCGCCTGCGCCACAATCTCTCCTCCCAGGACAGTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGCGCCTGCGCCACAATCTCTCCTCCCAGGACAGTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGC 592
Query 593 AGTTGGGGTCACGACTCGCATGGACTTTAACTGCAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGTTGGGGTCACGACTCGCATGGACTTTAACTGCAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTC 666
Query 667 CCCAGTGCTGTGTCTCGCAACATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCAGTGCTGTGTCTCGCAACATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA 740
Query 741 AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG 814
Query 815 AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG 888
Query 889 TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG 962
Query 963 GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAG- 1035
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGT 1036
Query 1036 ----------------------------------------------CTACAACTA------GAGG--------- 1048
|.||||.|| ||||
Sbjct 1037 TTTTTGTAGCATCAGATCCAACAGTTAAAACAGATCGACTGTGGCACGACAAGTATACTTTGAGGAAATCGATG 1110
Query 1049 ------------ATGAC-------CAGGGTGTGAA------TTTG---GGA--------------CTTG----A 1076
||||| |||..|..||| |||| ||| |||| |
Sbjct 1111 ATTCCTTCGTTTATGACGATGGATCAGTCTAGGAAGGTCCTTTTGATAGGAAAATCAATAAATTTCTTGCACCA 1184
Query 1077 GAGTAGTTT------AACACTTCGGCGCCTCC-----------TG--------------GTTTG---------- 1109
||||| |.|| |.|||| || ||.||
Sbjct 1185 ----AGTTTGTCATGATCA-------GACTCCCACTACAAAGATGATAGCTGTGACCAAGTCTGCAGAGTCACC 1247
Query 1110 -------------GACCTATGATCCC--------AAAAT------------ACGACTGA--------------A 1136
||||||| ||.| ||||| |.||.||| |
Sbjct 1248 CCAGGACGCTGCAGACCTAT--TCACAGACTTGGAAAATGCATTTCAGGGGAAGATTGATGCTGCTTATTTTGA 1319
Query 1137 GACC--------------------------------------CTTGCGGCCCTAGTGGACCAC-TGC---CAA- 1167
|||| ||||| |||||||| ||| |||
Sbjct 1320 GACCAGCAAATACCTGTTGGATGTTCTCAATAAAAAGTACAGCTTGC--------TGGACCACATGCAGGCAAT 1385
Query 1168 -----GGTCCCACGCGCGTCTTTCCCACGCACGTCTTTCCCACGCGC------GACTTTC-----CCACGCGCG 1225
||| ||..||.||||...||.|.| |.||||...|.||.| |||||.| ||| |
Sbjct 1386 GAGGCGGT---ACCTGCTTCTTGGTCAAGGA-GACTTTATAAGGCACTTAATGGACTTGCTAAAACCA-----G 1450
Query 1226 -ACTT-TC---CCATGC-ACGTCTTT-----------------------------------------------C 1246
|||| || ||| || |||.|||| |
Sbjct 1451 AACTTGTCCGTCCA-GCTACGACTTTGTATCAGCATAACTTGACTGGAATTCTAGAAACCGCTGTCAGAGCCAC 1523
Query 1247 CCACGCGC---------GTCTT----TCC-----------CACGCGCGTC-------------------TGGCA 1277
|.||||.| |||.| ||| .|||.|||.| ||.||
Sbjct 1524 CAACGCACAGTTTGACAGTCCTGAGATCCTGCGAAGGCTGGACGTGCGGCTGCTGGAGGTCTCTCCAGGTGACA 1597
Query 1278 CTCGCT---TTGT-TTCAGAACTCGTTTG--------------------------------------------- 1302
||.|.| .||| ||||| .||||.||.
Sbjct 1598 CTGGATGGGATGTCTTCAG-CCTCGATTATCATGTTGACGGACCAATTGCAACTGTGTTTACTCGAGAATGTAT 1670
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1671 GAGCCACTACCTAAGAGTATTTAACTTCCTCTGGAGGGCGAAGCGGATGGAATACATCCTCACTGACATACGGA 1744
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1745 AGGGACACATGTGCAATGCAAAGCTCCTGAGAAACATGCCAGAGTTCTCCGGGGTGCTGCACCAGTGTCACATT 1818
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1819 TTGGCCTCTGAGATGGTCCATTTCATTCATCAGATGCAGTATTACATCACATTTGAGGTGCTTGAATGTTCTTG 1892
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1893 GGATGAGCTTTGGAACAAAGTCCAGCAGGCCCAGGATTTGGATCACATCATTGCTGCACACGAGGTGTTCTTAG 1966
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1967 ACACCATCATCTCCCGCTGCCTGCTGGACAGTGACTCCAGGGCACTTTTAAATCAACTTAGAGCTGTGTTTGAT 2040
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2041 CAAATTATTGAACTTCAGAATGCTCAAGATGCAATATACAGAGCTGCTCTGGAAGAATTGCAGAGACGATTACA 2114
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2115 GTTTGAAGAGAAAAAGAAACAGCGTGAAATTGAGGGCCAGTGGGGAGTGACGGCAGCAGAGGAAGAGGAGGAAA 2188
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2189 ATAAGAGGATTGGAGAATTTAAAGAATCTATACCAAAAATGTGCTCACAGTTGCGAATATTGACCCATTTCTAC 2262
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2263 CAGGGTATCGTGCAGCAGTTTTTGGTGTTACTGACGACCAGCTCTGACGAGAGTCTTCGGTTTCTTAGCTTCAG 2336
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2337 GCTGGACTTCAACGAGCATTACAAAGCCAGGGAGCCCAGGCTCCGTGTGTCTCTGGGTACCAGGGGGCGGCGCA 2410
Query 1303 ----------- 1302
Sbjct 2411 GCTCCCACACG 2421
