Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11496
- Subject:
- XM_017020323.2
- Aligned Length:
- 2728
- Identities:
- 578
- Gaps:
- 2120
Alignment
Query 1 ATGGCGACCCCGGACCAGAAGTCGCCGAACGTTCTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGCTGATGTAGCCCAGCAGTTCCAGTATGCTGTGCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGAATTTTTAGTAGCTGAAAAAATCAAGAAAGAGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCAGAACTCCACAGAAAACTTCATTCACAGGGAGTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCTCAGTGAGGACCCACGCAGGCAGCCAAGCAAGGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GAGATGCCCACTCAACCCCTTACTACTATGCCAGGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGCAGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CGCGCCTGCGCCACAATCTCTCCTCCCAGGACAGTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGTTGGGGTCACGACTCGCATGGACTTTAACTGCAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CCCAGTGCTGTGTCTCGCAACATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA 740
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ---------------------ATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA 53
Query 741 AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 54 AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG 127
Query 815 AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 128 AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG 201
Query 889 TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG 275
Query 963 GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGC 349
Query 1037 TACAACTAGAGGATGACCAGGGTGTGAATTTGGGACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350 TACAACTAGAGGATGACCAGGGTGTGAATTTGGGACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGG 423
Query 1111 ACCTATGATCCCAAAATACGACTGAAGACCCTTGCGGCCCTAGTGGACCACTGCCAAGG--------------- 1169
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 424 ACCTATGATCCCAAAATACGACTGAAGACCCTTGCGGCCCTAGTGGACCACTGCCAAGGAAGGAAAGGAGGTGA 497
Query 1170 -------TC------CCACGC---------------------------GCG---TCTTTCCCACGCACGTCTTT 1200
|| |||||| ||| |||....|| ||||.||
Sbjct 498 GCTGGCCTCAGCTGTCCACGCCTACACAAAAACAGGAGACCCGTACATGCGGTCTCTGGTGCA-GCACATC--- 567
Query 1201 CCCA--CGCGCGACT---------------TTCC--CACGCGC------------------------GAC-TTT 1230
|.|| |.||.|.|| |||| .|| ||| ||| .||
Sbjct 568 CTCAGCCTCGTGTCTCATCCTGTTTTGAGCTTCCTGTAC-CGCTGGATATATGATGGGGAGCTTGAGGACACTT 640
Query 1231 CCCATGCACGTCTT-----------TCCCAC----------GCGCGTCTTTCCCACG-CGCGTCT-------GG 1275
.|||.|.|..|.|| |||.|| |..||.||.|..|||| |..||.| ||
Sbjct 641 ACCACGAATTTTTTGTAGCATCAGATCCAACAGTTAAAACAGATCGACTGTGGCACGACAAGTATACTTTGAGG 714
Query 1276 CACTCG-------CTTTGTT------------TCA------GAA----CTCGTTTG------------------ 1302
.|.||| |||.||| ||| ||| || ||||
Sbjct 715 AAATCGATGATTCCTTCGTTTATGACGATGGATCAGTCTAGGAAGGTCCT--TTTGATAGGAAAATCAATAAAT 786
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 787 TTCTTGCACCAAGTTTGTCATGATCAGACTCCCACTACAAAGATGATAGCTGTGACCAAGTCTGCAGAGTCACC 860
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 861 CCAGGACGCTGCAGACCTATTCACAGACTTGGAAAATGCATTTCAGGGGAAGATTGATGCTGCTTATTTTGAGA 934
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 935 CCAGCAAATACCTGTTGGATGTTCTCAATAAAAAGTACAGCTTGCTGGACCACATGCAGGCAATGAGGCGGTAC 1008
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1009 CTGCTTCTTGGTCAAGGAGACTTTATAAGGCACTTAATGGACTTGCTAAAACCAGAACTTGTCCGTCCAGCTAC 1082
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1083 GACTTTGTATCAGCATAACTTGACTGGAATTCTAGAAACCGCTGTCAGAGCCACCAACGCACAGTTTGACAGTC 1156
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1157 CTGAGATCCTGCGAAGGCTGGACGTGCGGCTGCTGGAGGTCTCTCCAGGTGACACTGGATGGGATGTCTTCAGC 1230
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1231 CTCGATTATCATGTTGACGGACCAATTGCAACTGTGTTTACTCGAGAATGTATGAGCCACTACCTAAGAGTATT 1304
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1305 TAACTTCCTCTGGAGGGCGAAGCGGATGGAATACATCCTCACTGACATACGGAAGGGACACATGTGCAATGCAA 1378
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1379 AGCTCCTGAGAAACATGCCAGAGTTCTCCGGGGTGCTGCACCAGTGTCACATTTTGGCCTCTGAGATGGTCCAT 1452
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1453 TTCATTCATCAGATGCAGTATTACATCACATTTGAGGTGCTTGAATGTTCTTGGGATGAGCTTTGGAACAAAGT 1526
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1527 CCAGCAGGCCCAGGATTTGGATCACATCATTGCTGCACACGAGGTGTTCTTAGACACCATCATCTCCCGCTGCC 1600
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1601 TGCTGGACAGTGACTCCAGGGCACTTTTAAATCAACTTAGAGCTGTGTTTGATCAAATTATTGAACTTCAGAAT 1674
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1675 GCTCAAGATGCAATATACAGAGCTGCTCTGGAAGAATTGCAGAGACGATTACAGTTTGAAGAGAAAAAGAAACA 1748
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1749 GCGTGAAATTGAGGGCCAGTGGGGAGTGACGGCAGCAGAGGAAGAGGAGGAAAATAAGAGGATTGGAGAATTTA 1822
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1823 AAGAATCTATACCAAAAATGTGCTCACAGTTGCGAATATTGACCCATTTCTACCAGGGTATCGTGCAGCAGTTT 1896
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1897 TTGGTGTTACTGACGACCAGCTCTGACGAGAGTCTTCGGTTTCTTAGCTTCAGGCTGGACTTCAACGAGCATTA 1970
Query 1303 ---------------------------------------------------------------- 1302
Sbjct 1971 CAAAGCCAGGGAGCCCAGGCTCCGTGTGTCTCTGGGTACCAGGGGGCGGCGCAGCTCCCACACG 2034
