Protein Global Alignment

Description

• Query: ccsbBroad304_11508
• Subject: NM_001178061.2
• Aligned Length: 973
• Identities: 439
• Gaps: 447

Alignment

Query   1  MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELGLDFQRFLTLNRTLL  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELGLDFQRFLTLNRTLL  74

Query  75  VAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDECYNYIRVLVPWDSQTLLACGTNSFSPVC  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  VAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDVENCAVRGKLTDECYNYIRVLVPWDSQTLLACGTNSFSPVC  148

Query 149  RSYGITSLQQEGEELSGQARCPFDATQSNVAIFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLR  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  RSYGITSLQQEGEELSGQARCPFDATQSNVAIFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLR  222

Query 223  EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFY  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFY  296

Query 297  FDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRP  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  FDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRP  370

Query 371  GSC------------------------------PA-----------------------------HS--------  377
           |||                              ||                             ||        
Sbjct 371  GSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLG  444

Query 378  ----------SPLGRS------------------------LQVLR-----------------------------  388
                     .|.|||                        .|..|                             
Sbjct 445  SNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCSGKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSR  518

Query 389  ---------------------------------------------------------GSREAP-------PVPG  398
                                                                    ||...|       |.||
Sbjct 519  CARHGACQRSCLASQDPYCGWHSSRGCVDIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPG  592

Query 399  PARGLPG------PRPE--------KGGRREAPVVPEASPRRALLP----------------------------  430
           |..|.|.      |||.        .|.||..|  |....|....|                            
Sbjct 593  PSPGTPSPPSDAHPRPQSSTLGVHTRGVRRDLP--PASASRSVPIPLLLASVAAAFALGASVSGLLVSCACRRA  664

Query 431  ----------PGRPERRPFQLLKGA-VHGLQRGERPSPLGHELDALQDVS------PPPRPAPP----AFPTRR  483
                     ||.|  ||..|...| .||  .|..|.|.....||.|...      |||...||    ..||..
Sbjct 665  HRRRGKDIETPGLP--RPLSLRSLARLHG--GGPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPE  734

Query 484  VSRGPFSPRVYLLTVFPP---VLDRRVGGEKPVSSVSQHFRGSWRTPTPRSLPAKLP-----------------  537
           ..  |..|...|.....|   ...|....|.|..|...|..|.   |.||.|....|                 
Sbjct 735  ST--PELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGG---PAPRVLVRPPPPGCPGQAVEVTTLEELL  803

Query 538  --------------------------------------------------------------------------  537
                                                                                     
Sbjct 804  RYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPRLG  877

Query 538  --------------------------------------------------------------------------  537
                                                                                     
Sbjct 878  VGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSR  951

Query 538  -----------  537
                      
Sbjct 952  QAVPNGGRFNF  962