Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11509
- Subject:
- NM_030913.5
- Aligned Length:
- 2840
- Identities:
- 1329
- Gaps:
- 1468
Alignment
Query 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
Query 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
Query 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
Query 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
Query 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
Query 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
Query 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
Query 519 CACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTG 592
Query 593 ATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTCCGA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTCCGA 666
Query 667 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 740
Query 741 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 814
Query 815 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 888
Query 889 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 962
Query 963 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTCCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 1036
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 963 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTTCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 1036
Query 1037 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 1110
Query 1111 GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCC------------------ 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCCTGATGATGTCCTGACCTT 1184
Query 1167 --------CTC-----------------------------GTC------------------------------- 1172
||| |||
Sbjct 1185 CATCAAGGCTCACCCGCTGCTGGACCCCGCTGTACCACCTGTCACCCATCAGCCTCTACTCACTCTCACTAGCA 1258
Query 1173 GGGCCCTCCT--CCC---------------GCCAGGC-CGTCCC-----GAAC------------------GGC 1205
|||||||.|| ||| ||..||| .||||| .||| |||
Sbjct 1259 GGGCCCTACTGACCCAAGTAGCTGTGGATGGCATGGCTGGTCCCCACAGTAACATCACAGTCATGTTCCTTGGC 1332
Query 1206 GGCCGTTTCAACTTTTAAAGGGA-------------GCGGCCCACGGCCTCCAGCGTGG-------GGAGCGCC 1259
|.||| |.|.|||| ||.|.|| |||| |||| ||.|..||
Sbjct 1333 ------TCCAA----TGATGGGACAGTGCTGAAGGTGCTGACC-------CCAG-GTGGGCGATCCGGGGGACC 1388
Query 1260 CGAG----TCCTCTCGGCCACGAGCTGGACGCTCTTCAGGACGTTTCACCGCCCCCTCGCCCCG---------- 1319
.||| |||||..|| |.|||.|.||.|| ||.||| |||| ||||.|
Sbjct 1389 TGAGCCCATCCTCCTGG--AAGAGATTGATGC-CTACAG--------------CCCT-GCCCGGTGCAGTGGGA 1444
Query 1320 ------CACCTCCAGCCTTCCCGAC---TC-----GC---------------AGAGTCTCCCGAGGCCCCTTTT 1364
||.| |||..|..|.|||| || || ||.|||.| ||| |||||
Sbjct 1445 AGCGGACAGC-CCAAACAGCACGACGGATCATAGGGCTGGAGCTGGACACTGAGGGTCAC---AGG---CTTTT 1511
Query 1365 CGCCTCGGGTTTATTTATTGACTGTCTT-------TCCCCCT---------------------GTCCTCGACAG 1410
.| .||.| |||..||.||||.|| ||||.|| |.||| |.|||
Sbjct 1512 TG---TGGCT---TTTTCTGGCTGTATTGTCTACCTCCCTCTCAGCCGGTGTGCCCGGCATGGGGCCT-GTCAG 1578
Query 1411 AAGAG-----TGG-----GAGG---------------------------------------------------- 1422
|.||| ||| .|||
Sbjct 1579 AGGAGCTGTTTGGCTTCTCAGGACCCATACTGTGGATGGCATAGCTCCAGGGGCTGTGTGGATATCAGGGGATC 1652
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1653 TGGTGGGACTGATGTGGATCAGGCTGGGAACCAGGAATCCATGGAGCATGGTGACTGCCAAGATGGAGCTACTG 1726
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1727 GGAGTCAGTCTGGCCCTGGGGATTCTGCTTATGGCGTGCGCCGGGACCTGCCCCCAGCCTCGGCCTCCCGCTCC 1800
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1801 GTCCCCATCCCACTCCTCCTGGCCAGTGTGGCCGCAGCTTTTGCCCTGGGCGCCTCAGTCTCTGGCCTCCTGGT 1874
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1875 CTCCTGTGCTTGTCGCCGCGCCCACCGACGTCGGGGCAAGGACATCGAGACTCCGGGGCTCCCGCGCCCTCTCT 1948
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1949 CCCTCCGCAGTTTGGCCCGGCTCCACGGTGGGGGCCCAGAGCCCCCGCCGCCCTCCAAGGACGGGGACGCGGTG 2022
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2023 CAGACGCCGCAGCTCTACACCACCTTCCTGCCGCCTCCGGAGGGCGTGCCCCCGCCGGAGCTGGCCTGCCTGCC 2096
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2097 CACCCCCGAGTCCACGCCGGAGCTGCCGGTCAAGCACCTCCGCGCCGCCGGGGACCCCTGGGAGTGGAACCAGA 2170
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2171 ACAGGAACAACGCCAAGGAGGGTCCGGGCCGCTCACGGGGCGGGCACGCGGCGGGCGGGCCCGCGCCCCGCGTG 2244
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2245 CTGGTGAGGCCACCGCCGCCCGGCTGTCCCGGGCAGGCCGTGGAAGTCACCACCCTGGAGGAACTGCTGCGCTA 2318
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2319 CCTGCACGGCCCGCAGCCGCCCAGAAAGGGGGCCGAGCCCCCCGCCCCTTTAACCTCGCGGGCGCTCCCGCCGG 2392
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2393 AGCCCGCCCCCGCCCTCTTGGGCGGCCCCAGCCCCAGGCCCCACGAGTGCGCCTCGCCGCTGAGGCTGGACGTG 2466
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2467 CCCCCCGAGGGCAGGTGCGCCTCTGCCCCCGCCCGGCCCGCGCTCTCCGCCCCCGCTCCCCGGCTGGGCGTCGG 2540
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2541 CGGAGGCCGGAGGTTGCCTTTCTCCGGCCACCGGGCCCCCCCTGCCCTGCTCACTCGAGTCCCCTCGGGAGGTC 2614
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2615 CCTCCAGGTACTCCGGGGGTCCCGGGAAGCACCTCCTGTACCTGGGCCGGCCCGAGGGCTACCGGGGCCGCGCC 2688
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2689 CTGAAAAGGGTGGACGTCGAGAAGCCCCAGTTGTCCCTGAAGCCTCCCCTCGTCGGGCCCTCCTCCCGCCAGGC 2762
Query 1423 ---------------------------- 1422
Sbjct 2763 CGTCCCGAACGGCGGCCGTTTCAACTTT 2790
