Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11509
Subject:
XM_017000081.1
Aligned Length:
2936
Identities:
1209
Gaps:
1684

Alignment

Query    1  ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC  74

Query   75  CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC  148

Query  149  TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA  222

Query  223  GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA  296

Query  297  GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT  370

Query  371  ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC  444

Query  445  CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC  518

Query  519  CACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTG  592
            |||||||||||||||||||||||||||                                               
Sbjct  519  CACCCAGTCCAACGTGGCCATCTTTGC-----------------------------------------------  545

Query  593  ATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTCCGA  666
                                                                                     |
Sbjct  546  -------------------------------------------------------------------------A  546

Query  667  GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  547  GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA  620

Query  741  TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  621  TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG  694

Query  815  CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  695  CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT  768

Query  889  TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  769  TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC  842

Query  963  CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTCCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA  1036
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  843  CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTTCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA  916

Query 1037  AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  917  AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA  990

Query 1111  GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCC------------------  1166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct  991  GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCCTGATGATGTCCTGACCTT  1064

Query 1167  --------CTC-----------------------------GTC-------------------------------  1172
                    |||                             |||                               
Sbjct 1065  CATCAAGGCTCACCCGCTGCTGGACCCCGCTGTACCACCTGTCACCCATCAGCCTCTACTCACTCTCACTAGCA  1138

Query 1173  GGGCCCTCCT--CCC---------------GCCAGGC-CGTCCC-----GAAC------------------GGC  1205
            |||||||.||  |||               ||..||| .|||||     .|||                  |||
Sbjct 1139  GGGCCCTACTGACCCAAGTAGCTGTGGATGGCATGGCTGGTCCCCACAGTAACATCACAGTCATGTTCCTTGGC  1212

Query 1206  GGCCGTTTCAACTTTTAAAGGGA-------------GCGGCCCACGGCCTCCAGCGTGG-------GGAGCGCC  1259
                  |.|||    |.|.||||             ||.|.||       |||| ||||       ||.|..||
Sbjct 1213  ------TCCAA----TGATGGGACAGTGCTGAAGGTGCTGACC-------CCAG-GTGGGCGATCCGGGGGACC  1268

Query 1260  CGAG----TCCTCTCGGCCACGAGCTGGACGCTCTTCAGGACGTTTCACCGCCCCCTCGCCCCG----------  1319
            .|||    |||||..||  |.|||.|.||.|| ||.|||              |||| ||||.|          
Sbjct 1269  TGAGCCCATCCTCCTGG--AAGAGATTGATGC-CTACAG--------------CCCT-GCCCGGTGCAGTGGGA  1324

Query 1320  ------CACCTCCAGCCTTCCCGAC---TC-----GC---------------AGAGTCTCCCGAGGCCCCTTTT  1364
                  ||.| |||..|..|.||||   ||     ||               ||.|||.|   |||   |||||
Sbjct 1325  AGCGGACAGC-CCAAACAGCACGACGGATCATAGGGCTGGAGCTGGACACTGAGGGTCAC---AGG---CTTTT  1391

Query 1365  CGCCTCGGGTTTATTTATTGACTGTCTT-------TCCCCCT---------------------GTCCTCGACAG  1410
            .|   .||.|   |||..||.||||.||       ||||.||                     |.||| |.|||
Sbjct 1392  TG---TGGCT---TTTTCTGGCTGTATTGTCTACCTCCCTCTCAGCCGGTGTGCCCGGCATGGGGCCT-GTCAG  1458

Query 1411  AAGAG-----TGG-----GAGG----------------------------------------------------  1422
            |.|||     |||     .|||                                                    
Sbjct 1459  AGGAGCTGTTTGGCTTCTCAGGACCCATACTGTGGATGGCATAGCTCCAGGGGCTGTGTGGATATCAGGGGATC  1532

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 1533  TGGTGGGACTGATGTGGATCAGGCTGGGAACCAGGAATCCATGGAGCATGGTGACTGCCAAGATGGAGCTACTG  1606

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 1607  GGAGTCAGTCTGGCCCTGGGGATTCTGCTTATGTGCTTCCGGGTCCTGGCCCTTCCCCTGGGACCCCCAGTCCT  1680

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 1681  CCCAGTGATGCCCACCCCCGGCCCCAGTCTTCCACTCTTGGAGTTCACACTCGGGGCGTGCGCCGGGACCTGCC  1754

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 1755  CCCAGCCTCGGCCTCCCGCTCCGTCCCCATCCCACTCCTCCTGGCCAGTGTGGCCGCAGCTTTTGCCCTGGGCG  1828

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 1829  CCTCAGTCTCTGGCCTCCTGGTCTCCTGTGCTTGTCGCCGCGCCCACCGACGTCGGGGCAAGGACATCGAGACT  1902

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 1903  CCGGGGCTCCCGCGCCCTCTCTCCCTCCGCAGTTTGGCCCGGCTCCACGGTGGGGGCCCAGAGCCCCCGCCGCC  1976

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 1977  CTCCAAGGACGGGGACGCGGTGCAGACGCCGCAGCTCTACACCACCTTCCTGCCGCCTCCGGAGGGCGTGCCCC  2050

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2051  CGCCGGAGCTGGCCTGCCTGCCCACCCCCGAGTCCACGCCGGAGCTGCCGGTCAAGCACCTCCGCGCCGCCGGG  2124

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2125  GACCCCTGGGAGTGGAACCAGAACAGGAACAACGCCAAGGAGGGTCCGGGCCGCTCACGGGGCGGGCACGCGGC  2198

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2199  GGGCGGGCCCGCGCCCCGCGTGCTGGTGAGGCCACCGCCGCCCGGCTGTCCCGGGCAGGCCGTGGAAGTCACCA  2272

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2273  CCCTGGAGGAACTGCTGCGCTACCTGCACGGCCCGCAGCCGCCCAGAAAGGGGGCCGAGCCCCCCGCCCCTTTA  2346

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2347  ACCTCGCGGGCGCTCCCGCCGGAGCCCGCCCCCGCCCTCTTGGGCGGCCCCAGCCCCAGGCCCCACGAGTGCGC  2420

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2421  CTCGCCGCTGAGGCTGGACGTGCCCCCCGAGGGCAGGTGCGCCTCTGCCCCCGCCCGGCCCGCGCTCTCCGCCC  2494

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2495  CCGCTCCCCGGCTGGGCGTCGGCGGAGGCCGGAGGTTGCCTTTCTCCGGCCACCGGGCCCCCCCTGCCCTGCTC  2568

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2569  ACTCGAGTCCCCTCGGGAGGTCCCTCCAGGTACTCCGGGGGTCCCGGGAAGCACCTCCTGTACCTGGGCCGGCC  2642

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2643  CGAGGGCTACCGGGGCCGCGCCCTGAAAAGGGTGGACGTCGAGAAGCCCCAGTTGTCCCTGAAGCCTCCCCTCG  2716

Query 1423  --------------------------------------------------  1422
                                                              
Sbjct 2717  TCGGGCCCTCCTCCCGCCAGGCCGTCCCGAACGGCGGCCGTTTCAACTTT  2766

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