Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11509
- Subject:
- XM_017000081.1
- Aligned Length:
- 2936
- Identities:
- 1209
- Gaps:
- 1684
Alignment
Query 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
Query 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
Query 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
Query 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
Query 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
Query 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
Query 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
Query 519 CACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTG 592
|||||||||||||||||||||||||||
Sbjct 519 CACCCAGTCCAACGTGGCCATCTTTGC----------------------------------------------- 545
Query 593 ATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTCCGA 666
|
Sbjct 546 -------------------------------------------------------------------------A 546
Query 667 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 620
Query 741 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 621 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 694
Query 815 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 768
Query 889 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 842
Query 963 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTCCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 1036
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 843 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTTCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 916
Query 1037 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 917 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 990
Query 1111 GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCC------------------ 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 991 GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCCTGATGATGTCCTGACCTT 1064
Query 1167 --------CTC-----------------------------GTC------------------------------- 1172
||| |||
Sbjct 1065 CATCAAGGCTCACCCGCTGCTGGACCCCGCTGTACCACCTGTCACCCATCAGCCTCTACTCACTCTCACTAGCA 1138
Query 1173 GGGCCCTCCT--CCC---------------GCCAGGC-CGTCCC-----GAAC------------------GGC 1205
|||||||.|| ||| ||..||| .||||| .||| |||
Sbjct 1139 GGGCCCTACTGACCCAAGTAGCTGTGGATGGCATGGCTGGTCCCCACAGTAACATCACAGTCATGTTCCTTGGC 1212
Query 1206 GGCCGTTTCAACTTTTAAAGGGA-------------GCGGCCCACGGCCTCCAGCGTGG-------GGAGCGCC 1259
|.||| |.|.|||| ||.|.|| |||| |||| ||.|..||
Sbjct 1213 ------TCCAA----TGATGGGACAGTGCTGAAGGTGCTGACC-------CCAG-GTGGGCGATCCGGGGGACC 1268
Query 1260 CGAG----TCCTCTCGGCCACGAGCTGGACGCTCTTCAGGACGTTTCACCGCCCCCTCGCCCCG---------- 1319
.||| |||||..|| |.|||.|.||.|| ||.||| |||| ||||.|
Sbjct 1269 TGAGCCCATCCTCCTGG--AAGAGATTGATGC-CTACAG--------------CCCT-GCCCGGTGCAGTGGGA 1324
Query 1320 ------CACCTCCAGCCTTCCCGAC---TC-----GC---------------AGAGTCTCCCGAGGCCCCTTTT 1364
||.| |||..|..|.|||| || || ||.|||.| ||| |||||
Sbjct 1325 AGCGGACAGC-CCAAACAGCACGACGGATCATAGGGCTGGAGCTGGACACTGAGGGTCAC---AGG---CTTTT 1391
Query 1365 CGCCTCGGGTTTATTTATTGACTGTCTT-------TCCCCCT---------------------GTCCTCGACAG 1410
.| .||.| |||..||.||||.|| ||||.|| |.||| |.|||
Sbjct 1392 TG---TGGCT---TTTTCTGGCTGTATTGTCTACCTCCCTCTCAGCCGGTGTGCCCGGCATGGGGCCT-GTCAG 1458
Query 1411 AAGAG-----TGG-----GAGG---------------------------------------------------- 1422
|.||| ||| .|||
Sbjct 1459 AGGAGCTGTTTGGCTTCTCAGGACCCATACTGTGGATGGCATAGCTCCAGGGGCTGTGTGGATATCAGGGGATC 1532
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1533 TGGTGGGACTGATGTGGATCAGGCTGGGAACCAGGAATCCATGGAGCATGGTGACTGCCAAGATGGAGCTACTG 1606
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1607 GGAGTCAGTCTGGCCCTGGGGATTCTGCTTATGTGCTTCCGGGTCCTGGCCCTTCCCCTGGGACCCCCAGTCCT 1680
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1681 CCCAGTGATGCCCACCCCCGGCCCCAGTCTTCCACTCTTGGAGTTCACACTCGGGGCGTGCGCCGGGACCTGCC 1754
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1755 CCCAGCCTCGGCCTCCCGCTCCGTCCCCATCCCACTCCTCCTGGCCAGTGTGGCCGCAGCTTTTGCCCTGGGCG 1828
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1829 CCTCAGTCTCTGGCCTCCTGGTCTCCTGTGCTTGTCGCCGCGCCCACCGACGTCGGGGCAAGGACATCGAGACT 1902
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1903 CCGGGGCTCCCGCGCCCTCTCTCCCTCCGCAGTTTGGCCCGGCTCCACGGTGGGGGCCCAGAGCCCCCGCCGCC 1976
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1977 CTCCAAGGACGGGGACGCGGTGCAGACGCCGCAGCTCTACACCACCTTCCTGCCGCCTCCGGAGGGCGTGCCCC 2050
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2051 CGCCGGAGCTGGCCTGCCTGCCCACCCCCGAGTCCACGCCGGAGCTGCCGGTCAAGCACCTCCGCGCCGCCGGG 2124
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2125 GACCCCTGGGAGTGGAACCAGAACAGGAACAACGCCAAGGAGGGTCCGGGCCGCTCACGGGGCGGGCACGCGGC 2198
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2199 GGGCGGGCCCGCGCCCCGCGTGCTGGTGAGGCCACCGCCGCCCGGCTGTCCCGGGCAGGCCGTGGAAGTCACCA 2272
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2273 CCCTGGAGGAACTGCTGCGCTACCTGCACGGCCCGCAGCCGCCCAGAAAGGGGGCCGAGCCCCCCGCCCCTTTA 2346
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2347 ACCTCGCGGGCGCTCCCGCCGGAGCCCGCCCCCGCCCTCTTGGGCGGCCCCAGCCCCAGGCCCCACGAGTGCGC 2420
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2421 CTCGCCGCTGAGGCTGGACGTGCCCCCCGAGGGCAGGTGCGCCTCTGCCCCCGCCCGGCCCGCGCTCTCCGCCC 2494
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2495 CCGCTCCCCGGCTGGGCGTCGGCGGAGGCCGGAGGTTGCCTTTCTCCGGCCACCGGGCCCCCCCTGCCCTGCTC 2568
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2569 ACTCGAGTCCCCTCGGGAGGTCCCTCCAGGTACTCCGGGGGTCCCGGGAAGCACCTCCTGTACCTGGGCCGGCC 2642
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2643 CGAGGGCTACCGGGGCCGCGCCCTGAAAAGGGTGGACGTCGAGAAGCCCCAGTTGTCCCTGAAGCCTCCCCTCG 2716
Query 1423 -------------------------------------------------- 1422
Sbjct 2717 TCGGGCCCTCCTCCCGCCAGGCCGTCCCGAACGGCGGCCGTTTCAACTTT 2766
