Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11516
- Subject:
- XM_017015468.1
- Aligned Length:
- 3075
- Identities:
- 2049
- Gaps:
- 1008
Alignment
Query 1 ATGAGGGTCCCTGTATTTGAGGATATAAAAGATGA-----AACTG------AAGAAGAAAAGATAGGGGAAGAA 63
|||| ||||| |||
Sbjct 1 -------------------------------ATGAGAAATAACTGCACTGCAAG-------------------- 23
Query 64 GAAAATGAAGAAGACCAGGTCTTCTATAAGCCTGTTATTGAAGACTTAAGCATGGAATTGGCCAGAAAATGCAC 137
..|||.|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24 ---CCTGATGA-----AGGTCTTCTATAAGCCTGTTATTGAAGACTTAAGCATGGAATTGGCCAGAAAATGCAC 89
Query 138 GGAACTCATTAGCGATATCCGTTATAAAGAAGAGTTTAAAAAGTCCAAGGATAAGTGTACATTTGTGACTGACA 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90 GGAACTCATTAGCGATATCCGTTATAAAGAAGAGTTTAAAAAGTCCAAGGATAAGTGTACATTTGTGACTGACA 163
Query 212 GTCCTATGCTAAACCATGTAAAAAATATCGGTGCTTTTATTTCTGAGGCAAAATACAAAGGCACCATTAAAGCT 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 164 GTCCTATGCTAAACCATGTAAAAAATATCGGTGCTTTTATTTCTGAGGCAAAATACAAAGGCACCATTAAAGCT 237
Query 286 GACCTTTCTAATTCTCTTTATAAGCGGATGCCAGCCACAATTGACAGTGTTTTTGCAGGAGAAGTTACACAGCT 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 GACCTTTCTAATTCTCTTTATAAGCGGATGCCAGCCACAATTGACAGTGTTTTTGCAGGAGAAGTTACACAGCT 311
Query 360 CCAGAGTGAGGTGGCCTACAAGCAGAAACATGATGCTGCCAAAGGATTCTCAGATTATGCCCACATGAAGGAGC 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 312 CCAGAGTGAGGTGGCCTACAAGCAGAAACATGATGCTGCCAAAGGATTCTCAGATTATGCCCACATGAAGGAGC 385
Query 434 CCCCTGAGGTTAAACATGCCATGGAGGTCAATAAACACCAGAGTAATATTTCTTATAGGAAAGACGTGCAGGAC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 386 CCCCTGAGGTTAAACATGCCATGGAGGTCAATAAACACCAGAGTAATATTTCTTATAGGAAAGACGTGCAGGAC 459
Query 508 ACCCACACGTACAGTGCAGAACTTGACCTACCAGACATCAAGATGGCAACCCAGATCTCTAAGATCATAAGCAA 581
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 460 ACCCACACGTACAGTGCAGAACTTGACCGACCAGACATCAAGATGGCAACCCAGATCTCTAAGATCATAAGCAA 533
Query 582 TGCAGAATACAAGAAAGGACAAGGAATAATGAATAAAGAGCCCGCTGTAATTGGAAGACCAGATTTTGAACATG 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 TGCAGAATACAAGAAAGGACAAGGAATAATGAATAAAGAGCCCGCTGTAATTGGAAGACCAGATTTTGAACATG 607
Query 656 CCGTGGAAGCTTCTAAACTTTCTAGTCAAATTAAATACAAAGAAAAATTTGATAATGAAATGAAGGATAAGAAA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 CCGTGGAAGCTTCTAAACTTTCTAGTCAAATTAAATACAAAGAAAAATTTGATAATGAAATGAAGGATAAGAAA 681
Query 730 CATCATTACAATCCTCTTGAAAGTGCTTCTTTTAGGCAGAATCAGCTTGCTGCTACACTGGCGAGCAATGTGAA 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 682 CATCATTACAATCCTCTTGAAAGTGCTTCTTTTAGGCAGAATCAGCTTGCTGCTACACTGGCGAGCAATGTGAA 755
Query 804 GTACAAGAAAGACATTCAAAATATGCATGATCCAGTTTCAGATCTCCCAAATTTGTTGTTTTTAGACCATGTTT 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 GTACAAGAAAGACATTCAAAATATGCATGATCCAGTTTCAGATCTCCCAAATTTGTTGTTTTTAGACCATGTTT 829
Query 878 TGAAAGCCAGCAAAATGCTCAGCGGCCGAGAATATAAAAAGCTCTTTGAGGAAAACAAAGGAATGTATCATTTT 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 TGAAAGCCAGCAAAATGCTCAGCGGCCGAGAATATAAAAAGCTCTTTGAGGAAAACAAAGGAATGTATCATTTT 903
Query 952 GATGCAGATGCTGTGGAACATCTGCACCATAAAGGCAATGCCGTCCTCCAAAGTCAGGTGAAATATAAAGAAGA 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 GATGCAGATGCTGTGGAACATCTGCACCATAAAGGCAATGCCGTCCTCCAAAGTCAGGTGAAATATAAAGAAGA 977
Query 1026 ATATGAGAAAAATAAGGGAAAGCCAATGCTTGAATTTGTTGAGACACCATCATATCAAGCTTCAAAGGAGGCTC 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 ATATGAGAAAAATAAGGGAAAGCCAATGCTTGAATTTGTTGAGACACCATCATATCAAGCTTCAAAGGAGGCTC 1051
Query 1100 AAAAGATGCAAAGTGAAAAAGTTTACAAAGAGGATTTTGAGAAGGAGATTAAAGGAAGGTCATCACTGGATTTA 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 AAAAGATGCAAAGTGAAAAAGTTTACAAAGAGGATTTTGAGAAGGAGATTAAAGGAAGGTCATCACTGGATTTA 1125
Query 1174 GACAAGACTCCAGAATTTTTACATGTAAAGTACATCACCAACCTTCTGAGGGAGAAAGAATATAAAAAAGATTT 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1126 GACAAGACTCCAGAATTTTTACATGTAAAGTACATCACCAACCTTCTGAGGGAGAAAGAATATAAAAAAGATTT 1199
Query 1248 GGAAAATGAGATAAAAGGGAAAGGAATGGAACTTAATTCAGAAGTTCTTGATATCCAAAGAGCAAAGCGAGCCT 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 GGAAAATGAGATAAAAGGGAAAGGAATGGAACTTAATTCAGAAGTTCTTGATATCCAAAGAGCAAAGCGAGCCT 1273
Query 1322 CTGAAATGGCAAGTGAGAAAGAATACAAGAAAGACCTGGAGTCAATAATTAAAGGGAAAGGAATGCAAGCTGGC 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 CTGAAATGGCAAGTGAGAAAGAATACAAGAAAGACCTGGAGTCAATAATTAAAGGGAAAGGAATGCAAGCTGGC 1347
Query 1396 ACTGACACCCTTGAAATGCAGCATGCCAAGAAGGCTGCAGAGATAGCGAGTGAGAAAGACTATAAAAGAGATCT 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 ACTGACACCCTTGAAATGCAGCATGCCAAGAAGGCTGCAGAGATAGCGAGTGAGAAAGACTATAAAAGAGATCT 1421
Query 1470 GGAGACTGAAATTAAAGGGAAAGGGATGCAGGTGAGCACAGACACTCTTGATGTCCAGAGAGCTAAGAAAGCAT 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1422 GGAGACTGAAATTAAAGGGAAAGGGATGCAGGTGAGCACAGACACTCTTGATGTCCAGAGAGCTAAGAAAGCAT 1495
Query 1544 CCGAGATGGCCAGCCAGAAACAATACAAGAAGGACTTAGAAAATGAAATTAAAGGGAAAGGAATGCAAGTGAGC 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 CCGAGATGGCCAGCCAGAAACAATACAAGAAGGACTTAGAAAATGAAATTAAAGGGAAAGGAATGCAAGTGAGC 1569
Query 1618 ATGGATATCCCAGATATCCTTCGAGCCAAGAGGACATCTGAAATCTATAGCCAGAGAAAGTATAAAGATGAAGC 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 ATGGATATCCCAGATATCCTTCGAGCCAAGAGGACATCTGAAATCTATAGCCAGAGAAAGTATAAAGATGAAGC 1643
Query 1692 AGAGAAGATGCTTTCTAACTATTCTACCATAGCAGATACTCCTGAAATTCAGAGAATTAAGACAACTCAACAAA 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1644 AGAGAAGATGCTTTCTAACTATTCTACCATAGCAGATACTCCTGAAATTCAGAGAATTAAGACAACTCAACAAA 1717
Query 1766 ACATTAGTGCGGTATTTTATAAGAAAGAAGTGGGAGCTGGCACTGCAGTGAAAGATAGCCCAGAGATCGAACGA 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1718 ACATTAGTGCGGTATTTTATAAGAAAGAAGTGGGAGCTGGCACTGCAGTGAAAGATAGCCCAGAGATCGAACGA 1791
Query 1840 GTGAAGAAAAATCAGCAGAATATTAGTTCAGTGAAATACAAAGAAGAGATTAAACATGCAACAGCCATTTCTGA 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1792 GTGAAGAAAAATCAGCAGAATATTAGTTCAGTGAAATACAAAGAAGAGATTAAACATGCAACAGCCATTTCTGA 1865
Query 1914 TCCTCCAGAACTAAAGAGAGTTAAAGAAAACCAGAAGAACATCAGCAATCTCCAGTATAAAGAGCAAAACTACA 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1866 TCCTCCAGAACTAAAGAGAGTTAAAGAAAACCAGAAGAACATCAGCAATCTCCAGTATAAAGAGCAAAACTACA 1939
Query 1988 AGGCCACTCCGGTAAGCATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGCAAGT 2061
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1940 AGGCCACTCCGGTAAGCATGACCCCGGAGATAGAGAGAGTGAGGCGAAACCAGGAGCAGCTGAGTGCGGTAA-- 2011
Query 2062 CGTTTCTGTTTCCTTTTATAT----------------------------TTTCT-------------------- 2087
.|||| |||||
Sbjct 2012 ----------------AATATAAGGGAGAACTTCAACGGGGAACTGCAATTTCTGATCCACCAGAGCTGAAGAG 2069
Query 2088 --CAAA----------CATAACAT-----ATTTTTATTTAAAAA--TATGCCCTTTGGAAG-GC-----CATTA 2136
|||| .|.||||| ||.|||| |||.|.| |..|| |.||||| || |.|||
Sbjct 2070 GGCAAAAGAAAACCAGAAAAACATCAGCAATGTTTA-TTACAGAGGTCAGC---TGGGAAGAGCTACCACTTTA 2139
Query 2137 --------TCCTTA---GCAAAC--------------------------------------------------- 2148
||||.| |.|||.
Sbjct 2140 AGTGTAACTCCTGAAATGGAAAGAGTGAAGAAGAATCAAGAAAATATTAGCTCGGTAAAATATACCCAGGACCA 2213
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2214 TAAACAGATGAAAGGTAGACCAAGTCTGATTTTAGATACACCTGCTATGAGACATGTTAAAGAAGCACAAAATC 2287
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2288 ATATTTCAATGGTAAAATACCATGAAGATTTTGAAAAAACAAAGGGGAGAGGCTTTACTCCCGTCGTGGACGAT 2361
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2362 CCTGTGACAGAGAGAGTGAGGAAGAACACCCAGGTGGTCAGCGATGCTGCCTATAAAGGGGTCCACCCTCACAT 2435
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2436 CGTGGAGATGGACAGGAGACCTGGAATCATTGTTGACCTCAAAGTTTGGCGCACAGATCCTGGCTCCATCTTCG 2509
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2510 ACCTTGATCCCCTGGAAGACAATATTCAGTCTAGAAGTCTCCATATGCTCTCTGAAAAGGCGAGTCACTATAGG 2583
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2584 CGACACTGGTCTCGATCCCATTCCAGCAGTACTTTCGGTACAGGTCTCGGAGACGACAGGTCAGAAATCTCCGA 2657
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2658 GATTTACCCTAGCTTTTCATGCTGCAGTGAGGTAACAAGACCGTCTGATGAAGGAGCACCTGTTCTTCCCGGAG 2731
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2732 CCTATCAGCAAAGCCATTCCCAAGGCTATGGCTACATGCACCAGACCAGTGTGTCATCCATGAGATCAATGCAG 2805
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2806 CATTCACCAAATCTAAGGACCTACCGAGCCATGTACGATTACAGTGCCCAGGATGAAGACGAGGTCTCCTTTAG 2879
Query 2149 -------------------------------------------------------------------------- 2148
Sbjct 2880 AGACGGCGACTACATCGTCAACGTGCAGCCTATTGACGATGGCTGGATGTACGGCACAGTGCAGAGAACAGGGA 2953
Query 2149 ----------------------------------------- 2148
Sbjct 2954 GAACAGGAATGCTCCCAGCGAATTACATTGAGTTTGTTAAT 2994
