Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11556
- Subject:
- NM_001270364.1
- Aligned Length:
- 2736
- Identities:
- 1515
- Gaps:
- 1221
Alignment
Query 1 ------------------------------ATGAAGATTGCAGTGATTGGACAGAGCCTGTTTGGCCAGGAAGT 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCAGGTCCTTCCAACCCTCCTGCTACCATGAAGATTGCAGTGATTGGACAGAGCCTGTTTGGCCAGGAAGT 74
Query 45 TTACTGCCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCG 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTACTGCCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCG 148
Query 119 ACCCCCTGGGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAG 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACCCCCTGGGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAG 222
Query 193 GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATT 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATT 296
Query 267 CATCCCCATGGAGATAATCAGTGCCCCCCGGCATGGCTCCATCATCTATCACCCGTCACTGCTCCCTAGGCACC 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CATCCCCATGGAGATAATCAGTGCCCCCCGGCATGGCTCCATCATCTATCACCCGTCACTGCTCCCTAGGCACC 370
Query 341 GAGGGGCCTCGGCCATCAACTGGACCCTCATTCACGGAGATAAGAAAGGGGGGTTTTCCATCTTCTGGGCGGAT 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGGGGCCTCGGCCATCAACTGGACCCTCATTCACGGAGATAAGAAAGGGGGGTTTTCCATCTTCTGGGCGGAT 444
Query 415 GATGGTCTGGACACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGTGCTCCCGGACGACACCGTGAGCACGCT 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GATGGTCTGGACACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGTGCTCCCGGACGACACCGTGAGCACGCT 518
Query 489 GTACAACCGCTTCCTCTTCCCTGAAGGCATCAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAG 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTACAACCGCTTCCTCTTCCCTGAAGGCATCAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAG 592
Query 563 CCCCCAGACTCCCTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTCAGAAGAAGGAGACAGCCAAGATCAAC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCCCCAGACTCCCTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTCAGAAGAAGGAGACAGCCAAGATCAAC 666
Query 637 TGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGC 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGC 740
Query 711 CTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCTGGTGCCCGAGGGAGACGCTTTGC 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCTGGTGCCCGAGGGAGACGCTTTGC 814
Query 785 CCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATG 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATG 888
Query 859 CTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCTCGAACTTCTTTAAGGGGGCAGCCAG 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCTCGAACTTCTTTAAGGGGGCAGCCAG 962
Query 933 CAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGTTTGGCAGCGGATCCTCC 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGTTTGGCAGCGGATCCTCC 1036
Query 1007 CCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTG 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTG 1110
Query 1081 GTGGAGGAAGTGAAGGAGCTGTGTGATGGCCTGGAGTTAGAAAATGAAGATGTGTACATGGCATCCACCTTTGG 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTGGAGGAAGTGAAGGAGCTGTGTGATGGCCTGGAGTTAGAAAATGAAGATGTGTACATGGCATCCACCTTTGG 1184
Query 1155 GGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG 1258
Query 1229 AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGGGGAGTTCGTGGATGCCGAG 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGGGGAGTTCGTGGATGCCGAG 1332
Query 1303 GGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCAC 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCAC 1406
Query 1377 CGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGG 1480
Query 1451 ACCGGGGCCGGCTGATGTA------------------------------------------------------- 1469
|||||||||||||||||||
Sbjct 1481 ACCGGGGCCGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGCCACCATTGAGGCC 1554
Query 1470 -------------------------------------------------------------------------- 1469
Sbjct 1555 CTGGATGCGGGTGCCGTCTACACGCTGGCCCTGAAGACCCACGTGGGCATGTCCATCCAGACCTTCCGCTACTT 1628
Query 1470 ----------------------CAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACC------ 1515
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGCTGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCT 1702
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1703 TGACCAGGAAGGAGCCTGTTGGGGTTTGTGGCATCATCATCCCCTGGAACTATCCCCTGATGATGCTGTCCTGG 1776
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1777 AAGACAGCTGCCTGCCTGGCTGCCGGGAACACAGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCACAGCCTT 1850
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1851 GAAGTTTGCAGAGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCC 1924
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1925 TGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGGTGGGCAAG 1998
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1999 CACATCATGAAAAGCTGTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCACCCCTCAT 2072
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2073 CATCTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTCTGTTTTCTTCAACAAAGGAGAGA 2146
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2147 ATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAG 2220
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2221 GTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCT 2294
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2295 TGTGAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCC 2368
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2369 CTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAG 2442
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2443 TCCTTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC 2516
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2517 CACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCC 2590
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2591 AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCT 2664
Query 1516 ------------------------------------------------------------------------ 1515
Sbjct 2665 GGATTTGGCAAAGATCTAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATAC 2736
