Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11599
- Subject:
- NR_125833.1
- Aligned Length:
- 2474
- Identities:
- 541
- Gaps:
- 1877
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCAACCTCTCACTTCCGCTTCCGGTGTGGGTCGTGAGCGCGCGCGAGCGCAGCAGTGGGAGGCGGCGACTGGCC 74
Query 1 ---------------------------------------------------------------ATGGTCGACTA 11
|||||.|||||
Sbjct 75 GGCAGAAGCCTCAGCACCATGTGGCACGAGGCTCGGAAGCATGAGCGGAAACTTCGAGGCATGATGGTGGACTA 148
Query 12 CAAGAAGAGGGCGGAGCGGAGACGGGAGTATTATGAAAAGATCAAGAAGGACCCAGCCCAGTTCCTGCAGGTAC 85
|||||||||||||||||||.|.||||||||.|||||.|||||.|||||.|||||.||.||||||||||||||.|
Sbjct 149 CAAGAAGAGGGCGGAGCGGCGTCGGGAGTACTATGAGAAGATTAAGAAAGACCCCGCTCAGTTCCTGCAGGTGC 222
Query 86 ATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCCTGTTAATATGATGCCC 159
||||||||||.||||||||.|||||||||||||||||.||||||||.||||||||||||||.||.|||||||||
Sbjct 223 ATGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCTGAGAGCCCTGTGAACATGATGCCC 296
Query 160 TGGCAGGGGGACACCAACAACATGATTGACCGATTCGATGTCCGTGCCCACCTGGACCACATCCCCGACTACAC 233
||||||||||||||||||||||||||||||||.||.|||||.|||||.||.||.|||||||||||.||||||||
Sbjct 297 TGGCAGGGGGACACCAACAACATGATTGACCGCTTTGATGTTCGTGCACATCTAGACCACATCCCTGACTACAC 370
Query 234 CCCCCCTCTGCTCACCACCATCTCCCCAGAACAGGAGTCGGACGAACGGAAGTGTAACTACGAGCGCTACAGAG 307
||||||.||||||||||||||||||||.|||||||||||.|||||.|||||.||||||||||||||.|||||||
Sbjct 371 CCCCCCACTGCTCACCACCATCTCCCCGGAACAGGAGTCAGACGAGCGGAAATGTAACTACGAGCGGTACAGAG 444
Query 308 GCCTGGTGCAGAACGACTTTGCCGGCATCTCAGAGGAGCAGTGCCTGTACCAGATCTACATTGATGAGTTGTAC 381
|||||||||||||||||||.|||||||||||.|||||.||||||.||||.||||||||||||||||||.|||||
Sbjct 445 GCCTGGTGCAGAACGACTTCGCCGGCATCTCTGAGGAACAGTGCTTGTATCAGATCTACATTGATGAGCTGTAC 518
Query 382 GGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCCATCGGTTATACCTA 455
||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 519 GGAGGCCTGCAGAGACCCAGCGAGGATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCCATCGGCTACACCTA 592
Query 456 -------------------------------------------------------------------------- 455
Sbjct 593 TGAAGATAGTACTGTGGCCGAGGTAGAGAAGGTGGCTGAGAAGCCAGAGGAGGAAGAGTCACCAGCAGAGGAGG 666
Query 456 -------------------------------------------------------------------------- 455
Sbjct 667 AGAGCAACTCGGATGAAGATGAGACGTGGAGGTGGATGTGGATGAGCTGAACCAGGAGCAGGTGGCTGATCTCA 740
Query 456 -------------------------------------------------------------------------- 455
Sbjct 741 ATAAGCAGGCCACAACCTACGGCATGGCTGATGGAGACTTTGTCAGGATGCTACGGAAAGATAAGGAGGAGGCA 814
Query 456 -------------------------------------------------------------------------- 455
Sbjct 815 GAGGCCATCAAACATGCCAAAGCCCTGGAGGAGGAGAAAGCCATGTACTCGGGCCGTCGTTCCCGGCGACAGCG 888
Query 456 -------------------------------------------------------------------------- 455
Sbjct 889 AAGAGAGTTCCGGGAGAAGCGGCTGAGAGGCCGCAAGATCAGCCCTCCCAGTTATGCCCGCCGAGACAGCCCCA 962
Query 456 -------------------------------------------------------------------------- 455
Sbjct 963 CCTATGACCCCTATAAGCGGTCACCTTCAGAATCTAGTTCCGAGTCCCGCTCCCGCTCTCGCTCCCCGAGCCCA 1036
Query 456 -------------------------------------------------------------------------- 455
Sbjct 1037 GGCCGCGAGGAAAAAATCACTTTCATCACCAGTTTTGGAGGCAGCGACGAGGAGGCAGCTGCTGCAGCTGCTGC 1110
Query 456 -------------------------------------------------------------------------- 455
Sbjct 1111 AGCCGCCGCATCCGGGGCTGCCCCAGGGAAGCCCCCTGCGCCTCCCCAAACGGGTGGCCCCGCTCCAGGCCGTA 1184
Query 456 ---------------------------------------CGAGGACCTCCAGCTCCCGCTCCAGCTCTCGCTCC 490
|.|||||||||||||||||.|||||.||.||||||
Sbjct 1185 ATGCCAGCACCCGCCGCCGCTCCTCTTCGTCCTCCGCCTCCAGGACCTCCAGCTCCCGATCCAGTTCGCGCTCC 1258
Query 491 AGCTCCCGCTCTCGCCGTGGTGGGGGCTACTACCGTTCCGGCCGCCACGCCCGCTCCCGGTCCCGCTCCTGGTC 564
||.||.|||||.|||||| |||||.|||||.||.|||||||||||.||||||||.||||||||||||||
Sbjct 1259 AGTTCGCGCTCCCGCCGT------GGCTATTACCGCTCTGGCCGCCACGCACGCTCCCGCTCCCGCTCCTGGTC 1326
Query 565 CCGCTCCCGCTCCCGCTCCCGGCGCTATTCCCGGTCCCG----------------------------------- 603
||||||.||||||||.|||||||||||.||.||.|||||
Sbjct 1327 CCGCTCACGCTCCCGTTCCCGGCGCTACTCACGCTCCCGCAGCCGCGGACGGCGGCACTCAGACGGCGGTTCCC 1400
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1401 GCGACGGACACCGCTACTCACGCTCCCCTGCCCGGCGCGGCGGGTACGTGCCCCGCCGAAGGAGCAGGAGCCGC 1474
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1475 TCCCGTTCAGGTGACCGCTATAAGCGGGGTGCCCGGGGCCCCAGGCACCATAGCAGCAGTCATAGCCGCAGCAG 1548
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1549 CTGGTCCCTCAGCCCTTCCCGAAGCCGCAGTGTGACCCGGAGCGGAAGCCGCAGCCAGAGCCGGAGCCGAAGCC 1622
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1623 GCAGCCAGAGCCACAGCCAGAGCCAGAGTCACTCACCATCGCCCCCAAGGGAGAAGCTGACCAGGCCGGCAGCG 1696
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1697 TCCCCTGCTGTGGGCGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTGCCAAAGTCAG 1770
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1771 TAAGAATTTGGAACTCGCCCGTCTAACTCCCGTCAGCAGCAGTGTCCAGAGCTGGGCCCGGTGGGCCTGCAGGG 1844
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1845 GGCCCAGGGGGAGGGGAGAGCCAGCCCAGAGACTGGGGAAGGGCTACCCAGGCAAACTAAGTCCCATCCCTGCC 1918
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1919 TCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGCGAGCTCTGGGCACCCA 1992
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1993 CGCCTATCCCACCCCTTCTCCCCCAGCCCAAGCTGACCCCACAGGAGAGGCTGAAGCTTCGGATGCAGAAGGCT 2066
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2067 CTGAACCGCCAGTTCAAGGCGGATAAGAAGGCAGCTCAGGAGAAGATGATCCAGCAGGAGCATGAGCGGCAGGA 2140
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2141 GCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGTTGCCTCCCCTCTCCCCGTGCAGGGAGC 2214
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2215 GAGAGCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGC 2288
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2289 TACAGTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCCATTACAGACATTAGGC 2362
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2363 AGAAAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTATTTAATGGACTT 2436
Query 604 -------------------------------- 603
Sbjct 2437 CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2468
