Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11599
- Subject:
- NR_125835.1
- Aligned Length:
- 2428
- Identities:
- 541
- Gaps:
- 1831
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGACCTCATCCTTGTCCGAGGCGCTCCGGAGATCACCGCAGAAGCCTCAGCACCATGTGGCACGAGGCTCGGAA 74
Query 1 -------------------------ATGGTCGACTACAAGAAGAGGGCGGAGCGGAGACGGGAGTATTATGAAA 49
|||||.||||||||||||||||||||||||.|.||||||||.|||||.|
Sbjct 75 GCATGAGCGGAAACTTCGAGGCATGATGGTGGACTACAAGAAGAGGGCGGAGCGGCGTCGGGAGTACTATGAGA 148
Query 50 AGATCAAGAAGGACCCAGCCCAGTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTC 123
||||.|||||.|||||.||.||||||||||||||.|||||||||||.||||||||.|||||||||||||||||.
Sbjct 149 AGATTAAGAAAGACCCCGCTCAGTTCCTGCAGGTGCATGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGTT 222
Query 124 GCCCTGGCCGCTGAGAGCCCTGTTAATATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGATTCGA 197
||||||||.||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||.||.||
Sbjct 223 GCCCTGGCTGCTGAGAGCCCTGTGAACATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGCTTTGA 296
Query 198 TGTCCGTGCCCACCTGGACCACATCCCCGACTACACCCCCCCTCTGCTCACCACCATCTCCCCAGAACAGGAGT 271
|||.|||||.||.||.|||||||||||.||||||||||||||.||||||||||||||||||||.||||||||||
Sbjct 297 TGTTCGTGCACATCTAGACCACATCCCTGACTACACCCCCCCACTGCTCACCACCATCTCCCCGGAACAGGAGT 370
Query 272 CGGACGAACGGAAGTGTAACTACGAGCGCTACAGAGGCCTGGTGCAGAACGACTTTGCCGGCATCTCAGAGGAG 345
|.|||||.|||||.||||||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||.
Sbjct 371 CAGACGAGCGGAAATGTAACTACGAGCGGTACAGAGGCCTGGTGCAGAACGACTTCGCCGGCATCTCTGAGGAA 444
Query 346 CAGTGCCTGTACCAGATCTACATTGATGAGTTGTACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGAAGAA 419
||||||.||||.||||||||||||||||||.|||||||||||||.||||||||||||||.||||||||||||||
Sbjct 445 CAGTGCTTGTATCAGATCTACATTGATGAGCTGTACGGAGGCCTGCAGAGACCCAGCGAGGATGAGAAGAAGAA 518
Query 420 GCTGGCAGAGAAGAAGGCTTCCATCGGTTATACCTA-------------------------------------- 455
|||||||||||||||||||||||||||.||.|||||
Sbjct 519 GCTGGCAGAGAAGAAGGCTTCCATCGGCTACACCTATGAAGATAGTACTGTGGCCGAGGTAGAGAAGGTGGCTG 592
Query 456 -------------------------------------------------------------------------- 455
Sbjct 593 AGAAGCCAGAGGAGGAAGAGTCACCAGCAGAGGAGGAGAGCAACTCGGATGAAGATGAGGTCATCCCCGACATC 666
Query 456 -------------------------------------------------------------------------- 455
Sbjct 667 GACGTGGAGGTGGATGTGGATGAGCTGAACCAGGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAACCTACGG 740
Query 456 -------------------------------------------------------------------------- 455
Sbjct 741 CATGGCTGATGGAGACTTTGTCAGGATGCTACGGAAAGATAAGGAGGAGGCAGAGGCCATCAAACATGCCAAAG 814
Query 456 -------------------------------------------------------------------------- 455
Sbjct 815 CCCTGGAGGAGGAGAAAGCCATGTACTCGGGCCGTCGTTCCCGGCGACAGCGAAGAGAGTTCCGGGAGAAGCGG 888
Query 456 -------------------------------------------------------------------------- 455
Sbjct 889 CTGAGAGGCCGCAAGATCAGCCCTCCCAGTTATGCCCGCCGAGACAGCCCCACCTATGACCCCTATAAGCGGTC 962
Query 456 -------------------------------------------------------------------------- 455
Sbjct 963 ACCTTCAGAATCTAGTTCCGAGTCCCGCTCCCGCTCTCGCTCCCCGAGCCCAGGCCGCGAGGAAAAAATCACTT 1036
Query 456 -------------------------------------------------------------------------- 455
Sbjct 1037 TCATCACCAGTTTTGGAGGCAGCGACGAGGAGGCAGCTGCTGCAGCTGCTGCAGCCGCCGCATCCGGGGCTGCC 1110
Query 456 -------------------------------------------------------------------------- 455
Sbjct 1111 CCAGGGAAGCCCCCTGCGCCTCCCCAAACGGGTGGCCCCGCTCCAGGCCGTAATGCCAGCACCCGCCGCCGCTC 1184
Query 456 -----------------CGAGGACCTCCAGCTCCCGCTCCAGCTCTCGCTCCAGCTCCCGCTCTCGCCGTGGTG 512
|.|||||||||||||||||.|||||.||.||||||||.||.|||||.||||||
Sbjct 1185 CTCTTCGTCCTCCGCCTCCAGGACCTCCAGCTCCCGATCCAGTTCGCGCTCCAGTTCGCGCTCCCGCCGT---- 1254
Query 513 GGGGCTACTACCGTTCCGGCCGCCACGCCCGCTCCCGGTCCCGCTCCTGGTCCCGCTCCCGCTCCCGCTCCCGG 586
|||||.|||||.||.|||||||||||.||||||||.||||||||||||||||||||.||||||||.||||||
Sbjct 1255 --GGCTATTACCGCTCTGGCCGCCACGCACGCTCCCGCTCCCGCTCCTGGTCCCGCTCACGCTCCCGTTCCCGG 1326
Query 587 CGCTATTCCCGGTCCCG--------------------------------------------------------- 603
|||||.||.||.|||||
Sbjct 1327 CGCTACTCACGCTCCCGCAGCCGCGGACGGCGGCACTCAGACGGCGGTTCCCGCGACGGACACCGCTACTCACG 1400
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1401 CTCCCCTGCCCGGCGCGGCGGGTACGTGCCCCGCCGAAGGAGCAGGAGCCGCTCCCGTTCAGGTGACCGCTATA 1474
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1475 AGCGGGGTGCCCGGGGCCCCAGGCACCATAGCAGCAGTCATAGCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGA 1548
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1549 AGCCGCAGTGTGACCCGGAGCGGAAGCCGCAGCCAGAGCCGGAGCCGAAGCCGCAGCCAGAGCCACAGCCAGAG 1622
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1623 CCAGAGTCACTCACCATCGCCCCCAAGGGAGAAGCTGACCAGGCCGGCAGCGTCCCCTGCTGTGGGCGAGAAGC 1696
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1697 TGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTGCCAAAGTCAGTAAGAATTTGGAACTCGCCCGT 1770
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1771 CTAACTCCCGTCAGCAGCAGTGTCCAGAGCTGGGCCCGGTGGGCCTGCAGGGGGCCCAGGGGGAGGGGAGAGCC 1844
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1845 AGCCCAGAGACTGGGGAAGGGCTACCCAGGCAAACTAAGTCCCATCCCTGCCTCCCATGGGACTCCAGCTGGCC 1918
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1919 CCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGCGAGCTCTGGGCACCCACGCCTATCCCACCCCTTCTCCC 1992
Query 604 -------------------------------------------------------------------------- 603
Sbjct 1993 CCAGCCCAAGCTGACCCCACAGGAGAGGCTGAAGCTTCGGATGCAGAAGGCTCTGAACCGCCAGTTCAAGGCGG 2066
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2067 ATAAGAAGGCAGCTCAGGAGAAGATGATCCAGCAGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCC 2140
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2141 ATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAG 2214
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2215 CCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGT 2288
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2289 CCCGAAGCCCCCATTACAGACATTAGGCAGAAAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAA 2362
Query 604 ------------------------------------------------------------ 603
Sbjct 2363 ATAAAAGCTAACATTATTTAATGGACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2422
