Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_002774.3
Aligned Length:
4389
Identities:
175
Gaps:
4191

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCGGGCAGCAGGGCAGCAGTGCAGCAGTGCAGCAGTGCGGTGAGGCGAGGGTGCGAGGCGGCTAAGCAAGGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGCCCGCCGTGGCGAGCCGCTGGGCCGTGTTCCGCCTCCTTTCGGGCTTTCCGCGGGTGTCTGGGGAGGGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCGGCCGCGGGCCTCAGGCCGTCCCCCTCCGCAGACCCCTTCTCTTATTCTGAGTCTAACCTATCCGCTGGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCTGGAAAGCGATTCTCGCCTGGAGTGGCTTTAGGCAGCGGTGGTGGGGAACGTCCTCTCTCAGGTGCCTGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCAACCTCCGAGCCCCGGGTTGCTCACGCTTCTCCGGTCCTCTACCCGAAGGCTCGATCCCGCTGGTACAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCGGCCAGGCTCCCTGTCTTGGTAGCTGTCCCTCTACCCCCGCCCCATGACCTCTTCTAGACCATTGAAAGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CATCCAAACCACTTTCCTGCTGCCACTCTTTCCTACCATCCCTCTAAATCACAGTTTCCAGGTGACTTTTCTAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCATGGCTTTTCTCGTTCACTCCTGTTCAAAAATCTTCTCACCAATTTTGTCACCATTTACTCAGCTGAGTGCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCTTTCTGTCAAGTATTTTACCAATAAATCTCTACTCCACACCACCGACAAGAAATATTTTGGAGCCATTTAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAAGGAGGAAACGGAAGCTTCTGCCGCTGCCTGATCCTCCATTGCTCCGAGCCGCGCGGGTGCAGCGGGCTGTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAGCCGCGGGCCGAGCCCCGCCGGAGCGCCCGAGAGCCCGCGCGTCCCGGGCGTCCGTCGGGGTCCGAGGTCCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCCTCAGGGAGTCCCCGCTCGGCAGCGCTCTCGCGTTTCACGCAGCGGCCGGGGATCTGGGACAGGCGGGGCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCGAGGCCGAGCCTGGCGCTGCCCAGCGGCCGGTGCAGGCCTCAAGCTGGGCCGGGCGGAGGGGAACCGGCGAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTGAAGCCCCGGGGCCGAAAGCCGGAGCCTGTGGCGGCCGCGGGGGTGGGGAGGGGGGTGGGGCGGCTTCTTGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCAGCGCCACACGGCGGCGCAGTGATGGATGTTAACAGCAGCGGCCACCCGGACCTCTACGGGCGCCTCTGCTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTTCCTCCTGCCGGAGGTGGGGGGCAGGCTGCCCGACCTGAGCCCCGACGGTGGCGCCGAACCGGTCGCGGTCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCGGGACGCCGCATCTGCTGAGCGGGGGCCCCCGAGGTGACGGCCAGCCCGGCGCCCACCTGGGACGCAACCCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGGCAATGCCTCCGGCCGCGGGGAGCAAATCAAGAAAGGGCCGAGAAAGTTGTGATCGGCTCTGTCCTGACGCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CATCTCTCTGCGATCGCGGGCAACTGCCTGGTGGTATCTCCGTGTGCTTCGTCAAGAAGCTCCGCCAGCCCTCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AACTACCTGATCGTGTCCATGGCGCTGGCCAACCTCTCGGTGGCCATGGCGGTCATGCCCTTCATCAGTGTCAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CGACCTCATCGGGGGCAAGTGGATCTTTGGACACTTTTTCTGTAACGTCTTCTCCATGAATGTCATGTGCTGCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGGCCTGGATCTTGACCTTGTACGTGATCAGCATCGACAGGTACCTTGGGATCATGAAGCCTCTCACGTACCCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATGAGGCAGAAGGGGAAATGCATGACGAAGATGATTCTTTCTGTCTGCCTTCTTTCCGCCTTTGTCACTTTACC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TACCATTTTTGGTCGGGCTCAGAATGTAAACGATGATAAGGTGTGCTTGGTCAGTCAAGACTTTGGCTACACGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTTACTCCACCGCAGTGGCATCCTAATCCCCATGTGCGTCATGCTTTTCATGTACTAACAGATTTACAAGGCCG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCAGGAAAAGCGCGGCCTAACACAGGTTACCTGGCTTCCCTCGAGTGGAGCCAGACAGCAGTAGTCACCCTGAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGGCACAGTGAAGTTCCAGGAGGTGGAAGAGTGTGCAAACCTTTCGAGACTCCTCAAGCATGAAAGGAAAAAAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATCTCCATCTTTAAGCGGAAACAGAAAGCAGCGACTACCTTGGGGATCATCGTCTGGGCCTCCACCATGTGCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCCGCCCTTTTTCCTCCTGACAGCCAGACCCTTCTGTCTATGGCACTGCCTGCAGCTGCATCCCACTGTGGGTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GAGAGGATATTTCCATGGCTGGGCTATGCAAACTCTCTCATTAACCCTTTTATTTATGCCTTCTTCAACTGGGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCTGAGGACCACCTATTGCAGCCGGCTCCAGTGCCAGTACCAGAATATCAACCAGACACTCTCAGCTGCAGGCA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGCATGAAGCCCTGAAGCTTGCTGAGAGGCCAGAGAGACCTGAGTTTGTCCTACAAAACTCTGACTACTGTAGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AAAAAAAGTCATGATTCATGACTGAAAGAGGGATAATGGAGATGAAATAAACAAGGCAAAATAGAGGTGGAAAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AGAAGAAAGTCATTTGCCAAGACTGCAGAATGGAATGCAGCTTCTGTCCTTTCTTAGGATGGCTAAAACGTGAC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AAACAGCATGACCTGATGTACAACATATCTTATGAGGGAGATGGTGACCTCTCCTTTTTTCTGTGGATCAGTGT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TATTGTGTGTTCTCAGTTTAAGATAGCAGATCATCTCAGCAGTAAGCACACTGACAGAATTGAGTTCCAGAAAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GAAGCAGTTTCAGGTTCTTAGCACATGTCCAAATCCATGCAAGTGGGAGAAAGTTCCAATGCACACTTTCCATG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CTTCCGAGTCTAGGTCTCGTGGTGAATATTCAGCAATCATTCATGAGAAAGAATGTATTTTGTTGTATGACAGA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGGGTTTACCAAGCAAACTGTGGTAAGCATAGTATCGAATATGTTGCATGTCCATTTTAGAAAACAGAGCCCAG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TCATCAGCTAATACAAATGATTTCCCAGAGCAGTGTTTGTTTCAAGCTTCTGTCAAATAGTTTGGCTTTTCTGC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AGGGTCCCTGTAACTTCCCCACAAATGTACTTCTTTGTTAATTCACTTATTGTTATGGTGTGGCTCAGGAACAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTCTCAGGATGGAGAGCAGCATACAACCTGAACAAAGCTTTTTCTTGTGCTCTGAAGGGTCCTGAGACGTGAGG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GGGATGCCTTCCATGAGGATTTTTATCTCAGTGAAGTGCGAGTGGTACCCACCTGTATTGTCATTAACATGATT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  ATTGGCATGTTTTTGACTCTCATTTTTCACAAGGGTGCAGTGGGGCCATGGACCATCCCATGGGATGGTCCATA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ACTGTATGTTATATGGAAATAGTGTGGGAATAATGGGTTTTCCATGAAAGGTTGTGATGCTTCTGGAGATGGGG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GCATAAACGTGTTCATTCTTGTTGAGCAGCATTGTGTTAAACCAAATTGTGTGAAGTGGAGGTCACCTGGACCA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTCCTGGGAAATGCTCCAGAACACCAGTCTGTTCCTTCTAGAAATTTGTTCTCTGTATTTATTTTTATTTTTTA  3478

Query    1  -----ATG--GAGTCTCAC----TCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCT  63
                 |.|  |.|||||||    .|||||.||||||||||||||||||||.|.|||||.|||||||||||||||
Sbjct 3479  TTTTGAGGCAGTGTCTCACCCATCCTGTCTCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCT  3552

Query   64  CTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATA  137
            ||||||||||||||.||||||||||||..||||.||||||||||||||||.||||||||.|...||||||||.|
Sbjct 3553  CTGCCTCCTGGGTTTAAGCAATTCTCCTGCCTCTGCCTCCCAAGTAGCTGAGATTACAGGCACCTGCCACCACA  3626

Query  138  CCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------------  198
            |||||.|||||||.|.|||||||||.||||.|||||||||||||||||||||||.||||||             
Sbjct 3627  CCTGGCTAATTTTCGTATTTTTAGTAGAGAAGGAGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGATC  3700

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3701  TCAGTTGATCCACCTGCCTTGGACTCCCAAAGTGCTGAGATTACAGGTGTGAGCCACTGTGCCCAGCCTGTTCT  3774

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3775  CTGTATCTTAAATCAACTCTGTGCCAAAGCAGTTCTGTCCCCTGACTCCCACCCCTACCCACCAAAAAGTGGTA  3848

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3849  GACATGAAGGGCAGGTAAGGGAACAGAAAATGTCTCCTTGCAGCTATATATATTTTAAACGAACTGTGTAATAA  3922

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3923  GTATGAGCTAAGGAGACAGAAAGACAGTAGATGAGAAAAGAAGAGTACCTATACCTACAAGGGGCAAAATGAAT  3996

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3997  GCAATCCTTCATTTGATAAGAGAGAACTGAAAGAGAATATTATTTTTCTACAATAAAGCAAGCTGTCCTCTCAG  4070

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4071  GATAAAGTGGAATTTCGACATGGATTATGGACTTCTTCCAACTCCCATTGACATTGCTTCTTACCACACATGGG  4144

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4145  GAAGGGCTGCCTTTCCTGAAAGGGGAAGAAGGCACTGTCCTTTCAGACAAAGTTTGTACAAATTCCTGAACTGC  4218

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4219  AGATTTGCTAATGTGACCGCGTATACTTATATTCATAATTTAAGTGATTGTTTATGGTCAGATACATATTGTTA  4292

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4293  AACTTGAAAATGTTTTATTACATTACATCAAATAAAGTCTATTTGTAGCTGAAAAAACTAAAAATAATAAAAAG  4366

Query  199  -----------------------  198
                                   
Sbjct 4367  GAGGAAACTGAGGCTTAAAACAA  4389

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