Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_002774.3
- Aligned Length:
- 4389
- Identities:
- 175
- Gaps:
- 4191
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGGGCAGCAGGGCAGCAGTGCAGCAGTGCAGCAGTGCGGTGAGGCGAGGGTGCGAGGCGGCTAAGCAAGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGGCCCGCCGTGGCGAGCCGCTGGGCCGTGTTCCGCCTCCTTTCGGGCTTTCCGCGGGTGTCTGGGGAGGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGCCGCGGGCCTCAGGCCGTCCCCCTCCGCAGACCCCTTCTCTTATTCTGAGTCTAACCTATCCGCTGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCTGGAAAGCGATTCTCGCCTGGAGTGGCTTTAGGCAGCGGTGGTGGGGAACGTCCTCTCTCAGGTGCCTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAACCTCCGAGCCCCGGGTTGCTCACGCTTCTCCGGTCCTCTACCCGAAGGCTCGATCCCGCTGGTACAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCGGCCAGGCTCCCTGTCTTGGTAGCTGTCCCTCTACCCCCGCCCCATGACCTCTTCTAGACCATTGAAAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATCCAAACCACTTTCCTGCTGCCACTCTTTCCTACCATCCCTCTAAATCACAGTTTCCAGGTGACTTTTCTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCATGGCTTTTCTCGTTCACTCCTGTTCAAAAATCTTCTCACCAATTTTGTCACCATTTACTCAGCTGAGTGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTTTCTGTCAAGTATTTTACCAATAAATCTCTACTCCACACCACCGACAAGAAATATTTTGGAGCCATTTAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGGAGGAAACGGAAGCTTCTGCCGCTGCCTGATCCTCCATTGCTCCGAGCCGCGCGGGTGCAGCGGGCTGTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGCCGCGGGCCGAGCCCCGCCGGAGCGCCCGAGAGCCCGCGCGTCCCGGGCGTCCGTCGGGGTCCGAGGTCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCTCAGGGAGTCCCCGCTCGGCAGCGCTCTCGCGTTTCACGCAGCGGCCGGGGATCTGGGACAGGCGGGGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCGAGGCCGAGCCTGGCGCTGCCCAGCGGCCGGTGCAGGCCTCAAGCTGGGCCGGGCGGAGGGGAACCGGCGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGAAGCCCCGGGGCCGAAAGCCGGAGCCTGTGGCGGCCGCGGGGGTGGGGAGGGGGGTGGGGCGGCTTCTTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAGCGCCACACGGCGGCGCAGTGATGGATGTTAACAGCAGCGGCCACCCGGACCTCTACGGGCGCCTCTGCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTCCTCCTGCCGGAGGTGGGGGGCAGGCTGCCCGACCTGAGCCCCGACGGTGGCGCCGAACCGGTCGCGGTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCGGGACGCCGCATCTGCTGAGCGGGGGCCCCCGAGGTGACGGCCAGCCCGGCGCCCACCTGGGACGCAACCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGCAATGCCTCCGGCCGCGGGGAGCAAATCAAGAAAGGGCCGAGAAAGTTGTGATCGGCTCTGTCCTGACGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATCTCTCTGCGATCGCGGGCAACTGCCTGGTGGTATCTCCGTGTGCTTCGTCAAGAAGCTCCGCCAGCCCTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACTACCTGATCGTGTCCATGGCGCTGGCCAACCTCTCGGTGGCCATGGCGGTCATGCCCTTCATCAGTGTCAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGACCTCATCGGGGGCAAGTGGATCTTTGGACACTTTTTCTGTAACGTCTTCTCCATGAATGTCATGTGCTGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGGCCTGGATCTTGACCTTGTACGTGATCAGCATCGACAGGTACCTTGGGATCATGAAGCCTCTCACGTACCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGAGGCAGAAGGGGAAATGCATGACGAAGATGATTCTTTCTGTCTGCCTTCTTTCCGCCTTTGTCACTTTACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACCATTTTTGGTCGGGCTCAGAATGTAAACGATGATAAGGTGTGCTTGGTCAGTCAAGACTTTGGCTACACGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTACTCCACCGCAGTGGCATCCTAATCCCCATGTGCGTCATGCTTTTCATGTACTAACAGATTTACAAGGCCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAGGAAAAGCGCGGCCTAACACAGGTTACCTGGCTTCCCTCGAGTGGAGCCAGACAGCAGTAGTCACCCTGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGCACAGTGAAGTTCCAGGAGGTGGAAGAGTGTGCAAACCTTTCGAGACTCCTCAAGCATGAAAGGAAAAAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCTCCATCTTTAAGCGGAAACAGAAAGCAGCGACTACCTTGGGGATCATCGTCTGGGCCTCCACCATGTGCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCCGCCCTTTTTCCTCCTGACAGCCAGACCCTTCTGTCTATGGCACTGCCTGCAGCTGCATCCCACTGTGGGTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGAGGATATTTCCATGGCTGGGCTATGCAAACTCTCTCATTAACCCTTTTATTTATGCCTTCTTCAACTGGGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTGAGGACCACCTATTGCAGCCGGCTCCAGTGCCAGTACCAGAATATCAACCAGACACTCTCAGCTGCAGGCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCATGAAGCCCTGAAGCTTGCTGAGAGGCCAGAGAGACCTGAGTTTGTCCTACAAAACTCTGACTACTGTAGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAAAAAAGTCATGATTCATGACTGAAAGAGGGATAATGGAGATGAAATAAACAAGGCAAAATAGAGGTGGAAAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGAAGAAAGTCATTTGCCAAGACTGCAGAATGGAATGCAGCTTCTGTCCTTTCTTAGGATGGCTAAAACGTGAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAACAGCATGACCTGATGTACAACATATCTTATGAGGGAGATGGTGACCTCTCCTTTTTTCTGTGGATCAGTGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TATTGTGTGTTCTCAGTTTAAGATAGCAGATCATCTCAGCAGTAAGCACACTGACAGAATTGAGTTCCAGAAAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAAGCAGTTTCAGGTTCTTAGCACATGTCCAAATCCATGCAAGTGGGAGAAAGTTCCAATGCACACTTTCCATG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTTCCGAGTCTAGGTCTCGTGGTGAATATTCAGCAATCATTCATGAGAAAGAATGTATTTTGTTGTATGACAGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGGGTTTACCAAGCAAACTGTGGTAAGCATAGTATCGAATATGTTGCATGTCCATTTTAGAAAACAGAGCCCAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCATCAGCTAATACAAATGATTTCCCAGAGCAGTGTTTGTTTCAAGCTTCTGTCAAATAGTTTGGCTTTTCTGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGGGTCCCTGTAACTTCCCCACAAATGTACTTCTTTGTTAATTCACTTATTGTTATGGTGTGGCTCAGGAACAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTCTCAGGATGGAGAGCAGCATACAACCTGAACAAAGCTTTTTCTTGTGCTCTGAAGGGTCCTGAGACGTGAGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGGATGCCTTCCATGAGGATTTTTATCTCAGTGAAGTGCGAGTGGTACCCACCTGTATTGTCATTAACATGATT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATTGGCATGTTTTTGACTCTCATTTTTCACAAGGGTGCAGTGGGGCCATGGACCATCCCATGGGATGGTCCATA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACTGTATGTTATATGGAAATAGTGTGGGAATAATGGGTTTTCCATGAAAGGTTGTGATGCTTCTGGAGATGGGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCATAAACGTGTTCATTCTTGTTGAGCAGCATTGTGTTAAACCAAATTGTGTGAAGTGGAGGTCACCTGGACCA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTCCTGGGAAATGCTCCAGAACACCAGTCTGTTCCTTCTAGAAATTTGTTCTCTGTATTTATTTTTATTTTTTA 3478
Query 1 -----ATG--GAGTCTCAC----TCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCT 63
|.| |.||||||| .|||||.||||||||||||||||||||.|.|||||.|||||||||||||||
Sbjct 3479 TTTTGAGGCAGTGTCTCACCCATCCTGTCTCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCT 3552
Query 64 CTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATA 137
||||||||||||||.||||||||||||..||||.||||||||||||||||.||||||||.|...||||||||.|
Sbjct 3553 CTGCCTCCTGGGTTTAAGCAATTCTCCTGCCTCTGCCTCCCAAGTAGCTGAGATTACAGGCACCTGCCACCACA 3626
Query 138 CCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------- 198
|||||.|||||||.|.|||||||||.||||.|||||||||||||||||||||||.||||||
Sbjct 3627 CCTGGCTAATTTTCGTATTTTTAGTAGAGAAGGAGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGATC 3700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3701 TCAGTTGATCCACCTGCCTTGGACTCCCAAAGTGCTGAGATTACAGGTGTGAGCCACTGTGCCCAGCCTGTTCT 3774
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3775 CTGTATCTTAAATCAACTCTGTGCCAAAGCAGTTCTGTCCCCTGACTCCCACCCCTACCCACCAAAAAGTGGTA 3848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3849 GACATGAAGGGCAGGTAAGGGAACAGAAAATGTCTCCTTGCAGCTATATATATTTTAAACGAACTGTGTAATAA 3922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3923 GTATGAGCTAAGGAGACAGAAAGACAGTAGATGAGAAAAGAAGAGTACCTATACCTACAAGGGGCAAAATGAAT 3996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3997 GCAATCCTTCATTTGATAAGAGAGAACTGAAAGAGAATATTATTTTTCTACAATAAAGCAAGCTGTCCTCTCAG 4070
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4071 GATAAAGTGGAATTTCGACATGGATTATGGACTTCTTCCAACTCCCATTGACATTGCTTCTTACCACACATGGG 4144
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4145 GAAGGGCTGCCTTTCCTGAAAGGGGAAGAAGGCACTGTCCTTTCAGACAAAGTTTGTACAAATTCCTGAACTGC 4218
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4219 AGATTTGCTAATGTGACCGCGTATACTTATATTCATAATTTAAGTGATTGTTTATGGTCAGATACATATTGTTA 4292
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4293 AACTTGAAAATGTTTTATTACATTACATCAAATAAAGTCTATTTGTAGCTGAAAAAACTAAAAATAATAAAAAG 4366
Query 199 ----------------------- 198
Sbjct 4367 GAGGAAACTGAGGCTTAAAACAA 4389
