Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_027762.3
- Aligned Length:
- 1710
- Identities:
- 177
- Gaps:
- 1512
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTCAACCCGTGTACGTGCCTGTGCCTAAAGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTGTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGAATCTGTACGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAATTCATCCTGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTTGAGAATACAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCATGCGTTCTGTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGCAGGGACTTAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAACAGAAATAACAAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGGAACTGCTTTTTCTTTTCCTGCTGAGTACTGCTAATAAAAGTGCTATTATCTGCTGATAGCATCGTCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTCATGTGTTGAGTTTTATACTTCTTTATGGATGGTGTATGTGAAATGTGGAGACTTCCACATTCTCAGTTTA 1332
Query 1 -------------------------------------------------------ATGGAGTCTCACT-CTGTC 18
|||||||.|..|| .||||
Sbjct 1333 TTCACATTGTGATACTACCTTTGAAGGTTTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGTTTGGCTGTTGTC 1406
Query 19 ACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCA 92
.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||..||||||..
Sbjct 1407 TCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTTCTGGGTTCAAGCGCTTCTCCTG 1480
Query 93 CCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAA-TTTTTGCATTTTTAGTGGA 165
||||||||||||||||||||||||||||||.||..||||||||..|||||.||| ||||||.|||||||||.||
Sbjct 1481 CCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGA 1554
Query 166 GAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT----------------------------------------- 198
||.||.||||||||||||||||||||.||||||
Sbjct 1555 GACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCTC 1628
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1629 AAAGTGCTGGGATTACAGGCGTGAGTCACTGCACCCAAGCCTCCTTTCTCTTTTGCCTATTAAACCTCTGCTCT 1702
Query 199 -------- 198
Sbjct 1703 TAACCTTA 1710
