Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_038906.1
- Aligned Length:
- 2981
- Identities:
- 171
- Gaps:
- 2785
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGGGGCCTTGGTCCTTCCATTGATTCATAAGTACAACACCCTACTTCTTGGATACAGAGCCATCGCGGAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCGCTGGAGTGAGGCAGCGTATGGAGCACATGGGACATGCAGACCCAGATGGACATCTTACAAACTTTCAGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGCTGAAGCCAGATTGTTCTTACAAATGGTCACCAGAAGGAGGACAATCACAAACTGTCTCATCCTCCTCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATCCAACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGTGGTTTGGAACTGGCCCAAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAACTAAACTTTTCTAAATATACATTAAACTGTCAACAAAGAGCACCGTGACCCACAGCCTGAATAAAGGGAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCCCAAGGCCCTCTGAAGCCACTAGTTCTGTGAGTTGTTTTAGGGAGAAGACAGACAACCAAGAATTATTTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTATTAGACTGTGCCCATCCAAGCCCAGGTAAAACTTTTTGATCAGCAGAAAACTGGAATTATTTCCCTTTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTATCCTGGATTGAGTGTGAATTCCCCAGAGAAACTTGGCTTTGAGAGCACTAGCTGGACATATAGGGGTCCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCAATCTGCTCTGAGAAGGGCCCTGTCTTCATCCTAAAGGAAGGCTTTAGAAAACTGTTATCTAAGATCTAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATTGAAGATGGTGAGAACCTGAGGCTGAGCAATTGGCCCCAATTCTTCCTGAAGCATTATCTGAGAGAGAGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTAGCCTGTGGTTTTTGACCCCTGGCAGAAGGGTGGAGAGAGGGAAGAAGAAAGAAGGAAGATGAAGACAACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCTGCTCAAGACCAACCCATCTCCCCTCATTCTGGGGTGACCAATTGAGAAAACAATGATATCTCCCTTACTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCATCTGTTTCCAAAGGCTTTGCTTCATCTACCAAAAAACCGTGTGAGTGAGAACCATCTACCCTCATGTGCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATTAAGCTCTTAGAGTCATTCTCTGGTGACTATATTGATTCATTTATTTGTACTCTAGGAACATAAAACAATAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCATTATTGACACAGAAAACAAAGAATAGACAGATAGCATACAGCTGAACAACTTTAATTACCAGGGTTCCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTCTGTTTAACTAGCTGTGTAAATATGAGTATTTGAATTAATTTTTCTAGGATCAATTTCCTTACTTCTAAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGAAAGACGAGGCCAAAAGTTCTTAACCTTACTTCTGGCTTTACAACTGAATGGTTCTCTGTTCCTAATAATG 1258
Query 1 ---------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCT 47
|.|.||||||.|||||||| ||||||||||||||||||||...||||
Sbjct 1259 AGTTCCTTTTTTTTTTTTTTTTCTGAGACGAAGTCTCGCTCTGTCA-CCAGGCTGGAGTGCAGTGGCACAATCT 1331
Query 48 TGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACA 121
| ||||||||||||||||||||||.||||||||||||||||||..||||||||||.|.|||||||||||.||||
Sbjct 1332 T-GCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCACGAGTAGCTGGGACTACA 1404
Query 122 GACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGG 195
..||..||||||||||||..|.|||||||||.|||||||||.||||..|.||||||||||||||||||||.|||
Sbjct 1405 CGCGCCTGCCACCATACCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGG 1478
Query 196 TCT----------------------------------------------------------------------- 198
|||
Sbjct 1479 TCTTGATCTCTTGACCTCGTGATCCGCCGGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGC 1552
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1553 GCCTGGCCCTAATAATGAGTTCTTATGAATGGTATATGTACGCCAAATAGAAAGCATGCTAATAGCTAAGAAGG 1626
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1627 AATCGTGAAGGATAATGAGAATTTGCTGCCTTTTCTAGTCATTCTAGAGGAATTTATAAATAAATAAAATGGTT 1700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1701 TGATATGTAAGAATATCTGCTGAGCCAAACAGTGCACACTTCTTAGACATAAGTTGTAGCCAAGGCAATAAAGC 1774
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1775 TTAAGGATGGAATAGAAGCATTAAGGAAAATTTTCCTAGAAAGGAAAAAAATGGAGGCAGAAAGGGTGGGAAAG 1848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1849 GCAGACAGAAGTCAACTCATAGGAAGCAGAGAGATAAAGAGCTTTGAAATATAATGTGAGGACCTAGACATATT 1922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1923 TGAGAAGAGAGGTACTGGTCAAAACAAAGGACAGAGATGGCAGAAGCCCACAGGAAACTTATGGCCAATGGTAG 1996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1997 CAGTCAGTGAGGATGAGTAGGGTAGTAATAATATATTATAACTAATTACTGCCATTTATTGATCACTTACTAAG 2070
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2071 TATTAAAATTATTTGTTAGGAAATTTATAAATACCTTGTCTCCTTTCTAGAACTCTCTCCAAAGGATATGGTCA 2144
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2145 TATTCATCATATAGATAAGTAAACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTCTGTCTGT 2218
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2219 GCTATTTTTACTATACCGTTGCTATTTGTCCATGAACAGGAAAAACCCTCAACTAGGGCCTTGAGCAATCAAGA 2292
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2293 ATTATTGGAAGGAAAAATCGTTACAGGTAACCACTGATAAATCAGATGGAACAATCACTTTTTGAGCAAAGGGA 2366
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2367 TTGTGTCCTCTTTATCTGCGTGTTCCCTGCATTTAGCCCAGGGTCTAGCAACTTGTGATAGACAAAGATGTGTT 2440
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2441 AGATCCCCCTTCAAAAAAGGACTTGCTGCTCAGCTGCTGGGGTGCAGTCAGCCTCCAGCCTCCAATCAGCTCTG 2514
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2515 TAAGAGCTGGCCTCAGCTGTAAATAAAAACTGCTTCATTTCAGGTCATGCTGGTATCCAATAACTGAGAAAGGA 2588
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2589 GTTGGGGGTAGGGGCAAAGAGGGGAGAGTGAAGGGGACAAAGGCCTGAAGCTAATCAGGGACCCCTCTGATGGC 2662
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2663 CAATTCTGACTCCAGAGCTCCCTATCAAGTGGGCCAAGTTCTTCTCAGCCCTACTCTGGATAGTGACTTCTCCC 2736
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2737 TTGGCCCAATTCTGTCTCTACCCACTCCTTTTCACAGGTGTTGATCCCTAATGAATATCCGGCACCCCGCATTC 2810
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2811 CATCTCGGTGACTGCTTCCAGAAAACACAAGCTGTGACATGCCCATTATGTACTCAATAAATCTTTAATAATTG 2884
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2885 AGTGGATAGAGTGATGTGAGTTGAGAAGCATTATTAAAGATTATTTTCCCAAAAATAAACAAAAAAAATGTGCC 2958
Query 199 --------------------- 198
Sbjct 2959 CATTGAAAAAAAAAAAAAAAA 2979
