Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_038906.1
Aligned Length:
2981
Identities:
171
Gaps:
2785

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACAGGGGCCTTGGTCCTTCCATTGATTCATAAGTACAACACCCTACTTCTTGGATACAGAGCCATCGCGGAATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCGCTGGAGTGAGGCAGCGTATGGAGCACATGGGACATGCAGACCCAGATGGACATCTTACAAACTTTCAGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGCTGAAGCCAGATTGTTCTTACAAATGGTCACCAGAAGGAGGACAATCACAAACTGTCTCATCCTCCTCTGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAATCCAACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGTGGTTTGGAACTGGCCCAAGCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAACTAAACTTTTCTAAATATACATTAAACTGTCAACAAAGAGCACCGTGACCCACAGCCTGAATAAAGGGAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCCCAAGGCCCTCTGAAGCCACTAGTTCTGTGAGTTGTTTTAGGGAGAAGACAGACAACCAAGAATTATTTAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTTATTAGACTGTGCCCATCCAAGCCCAGGTAAAACTTTTTGATCAGCAGAAAACTGGAATTATTTCCCTTTCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTATCCTGGATTGAGTGTGAATTCCCCAGAGAAACTTGGCTTTGAGAGCACTAGCTGGACATATAGGGGTCCAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTCCAATCTGCTCTGAGAAGGGCCCTGTCTTCATCCTAAAGGAAGGCTTTAGAAAACTGTTATCTAAGATCTAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GATTGAAGATGGTGAGAACCTGAGGCTGAGCAATTGGCCCCAATTCTTCCTGAAGCATTATCTGAGAGAGAGAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTAGCCTGTGGTTTTTGACCCCTGGCAGAAGGGTGGAGAGAGGGAAGAAGAAAGAAGGAAGATGAAGACAACT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCTGCTCAAGACCAACCCATCTCCCCTCATTCTGGGGTGACCAATTGAGAAAACAATGATATCTCCCTTACTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCATCTGTTTCCAAAGGCTTTGCTTCATCTACCAAAAAACCGTGTGAGTGAGAACCATCTACCCTCATGTGCTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ATTAAGCTCTTAGAGTCATTCTCTGGTGACTATATTGATTCATTTATTTGTACTCTAGGAACATAAAACAATAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGCATTATTGACACAGAAAACAAAGAATAGACAGATAGCATACAGCTGAACAACTTTAATTACCAGGGTTCCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGTCTGTTTAACTAGCTGTGTAAATATGAGTATTTGAATTAATTTTTCTAGGATCAATTTCCTTACTTCTAAAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAGAAAGACGAGGCCAAAAGTTCTTAACCTTACTTCTGGCTTTACAACTGAATGGTTCTCTGTTCCTAATAATG  1258

Query    1  ---------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCT  47
                                       |.|.||||||.|||||||| ||||||||||||||||||||...||||
Sbjct 1259  AGTTCCTTTTTTTTTTTTTTTTCTGAGACGAAGTCTCGCTCTGTCA-CCAGGCTGGAGTGCAGTGGCACAATCT  1331

Query   48  TGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACA  121
            | ||||||||||||||||||||||.||||||||||||||||||..||||||||||.|.|||||||||||.||||
Sbjct 1332  T-GCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCACGAGTAGCTGGGACTACA  1404

Query  122  GACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGG  195
            ..||..||||||||||||..|.|||||||||.|||||||||.||||..|.||||||||||||||||||||.|||
Sbjct 1405  CGCGCCTGCCACCATACCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGG  1478

Query  196  TCT-----------------------------------------------------------------------  198
            |||                                                                       
Sbjct 1479  TCTTGATCTCTTGACCTCGTGATCCGCCGGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGC  1552

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1553  GCCTGGCCCTAATAATGAGTTCTTATGAATGGTATATGTACGCCAAATAGAAAGCATGCTAATAGCTAAGAAGG  1626

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1627  AATCGTGAAGGATAATGAGAATTTGCTGCCTTTTCTAGTCATTCTAGAGGAATTTATAAATAAATAAAATGGTT  1700

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1701  TGATATGTAAGAATATCTGCTGAGCCAAACAGTGCACACTTCTTAGACATAAGTTGTAGCCAAGGCAATAAAGC  1774

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1775  TTAAGGATGGAATAGAAGCATTAAGGAAAATTTTCCTAGAAAGGAAAAAAATGGAGGCAGAAAGGGTGGGAAAG  1848

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1849  GCAGACAGAAGTCAACTCATAGGAAGCAGAGAGATAAAGAGCTTTGAAATATAATGTGAGGACCTAGACATATT  1922

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1923  TGAGAAGAGAGGTACTGGTCAAAACAAAGGACAGAGATGGCAGAAGCCCACAGGAAACTTATGGCCAATGGTAG  1996

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1997  CAGTCAGTGAGGATGAGTAGGGTAGTAATAATATATTATAACTAATTACTGCCATTTATTGATCACTTACTAAG  2070

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2071  TATTAAAATTATTTGTTAGGAAATTTATAAATACCTTGTCTCCTTTCTAGAACTCTCTCCAAAGGATATGGTCA  2144

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2145  TATTCATCATATAGATAAGTAAACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTCTGTCTGT  2218

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2219  GCTATTTTTACTATACCGTTGCTATTTGTCCATGAACAGGAAAAACCCTCAACTAGGGCCTTGAGCAATCAAGA  2292

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2293  ATTATTGGAAGGAAAAATCGTTACAGGTAACCACTGATAAATCAGATGGAACAATCACTTTTTGAGCAAAGGGA  2366

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2367  TTGTGTCCTCTTTATCTGCGTGTTCCCTGCATTTAGCCCAGGGTCTAGCAACTTGTGATAGACAAAGATGTGTT  2440

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2441  AGATCCCCCTTCAAAAAAGGACTTGCTGCTCAGCTGCTGGGGTGCAGTCAGCCTCCAGCCTCCAATCAGCTCTG  2514

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2515  TAAGAGCTGGCCTCAGCTGTAAATAAAAACTGCTTCATTTCAGGTCATGCTGGTATCCAATAACTGAGAAAGGA  2588

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2589  GTTGGGGGTAGGGGCAAAGAGGGGAGAGTGAAGGGGACAAAGGCCTGAAGCTAATCAGGGACCCCTCTGATGGC  2662

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2663  CAATTCTGACTCCAGAGCTCCCTATCAAGTGGGCCAAGTTCTTCTCAGCCCTACTCTGGATAGTGACTTCTCCC  2736

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2737  TTGGCCCAATTCTGTCTCTACCCACTCCTTTTCACAGGTGTTGATCCCTAATGAATATCCGGCACCCCGCATTC  2810

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2811  CATCTCGGTGACTGCTTCCAGAAAACACAAGCTGTGACATGCCCATTATGTACTCAATAAATCTTTAATAATTG  2884

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2885  AGTGGATAGAGTGATGTGAGTTGAGAAGCATTATTAAAGATTATTTTCCCAAAAATAAACAAAAAAAATGTGCC  2958

Query  199  ---------------------  198
                                 
Sbjct 2959  CATTGAAAAAAAAAAAAAAAA  2979

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