Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_039997.1
- Aligned Length:
- 1492
- Identities:
- 169
- Gaps:
- 1302
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGCCTCCTCGCTTCTTAAAATGTCTGAGCTCTACGAAGTGGAACTGTTAGCCCTCCGTTTATTGCCTTACTTC 74
Query 1 ---------------------------------------------------------------------ATGGA 5
|.|||
Sbjct 75 ACACTGAAATAAGCCAACGTTTATTTTATTTTATTTATTTTATTATTTATTTTATTATTTTTTTTCGAGACGGA 148
Query 6 GTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCA 79
|||||.|||||| |||||||||||||||.||||||.|||||.|.||||||||||||||.|||||| |.|||||
Sbjct 149 GTCTCGCTCTGT--CCCAGGCTGGAGTGCCGTGGCGGGATCTCGACTCACTGCAACCTCCGCCTCC-GTGTTCA 219
Query 80 AGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGGGTAATTTTT 151
|||.||||| |||||||||||||.||||||||||||||||| ||| .|||||||..||.||.||||||||
Sbjct 220 AGCTATTCT---ACCTCAGCCTCCCGAGTAGCTGGGATTACAG--GTGCCCGCCACCACGCCCGGCTAATTTTT 288
Query 152 GCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------------------- 198
|.|||||||||.||||.||.||||||||||||||||||||.||.|||
Sbjct 289 GTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGATCTCGAACTGCTGACCTTGTGATCCTCCCG 362
Query 199 -------------------------------------------------------------------------- 198
Sbjct 363 CCTCAGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCCCAACGTTTCTTTTTAAGCCT 436
Query 199 -------------------------------------------------------------------------- 198
Sbjct 437 GTCATATCTCACATTAAATGTGTAAGTCTCTGAACTGTAGGGCTTTGAACAAAGGAAAGTTCCATGAGAATACT 510
Query 199 -------------------------------------------------------------------------- 198
Sbjct 511 ATATGATGCCAATTTCTACTGTTAGGAACGCGATAACAGAGTGCAGTGGGGGAGAAAATACCGTCCTCAAGATC 584
Query 199 -------------------------------------------------------------------------- 198
Sbjct 585 TGAGAAACTGGAGAGGAAAAGTCACAGGACAACCAACTTCTCTATGACATAGCCCAGCATCTGAGGAAAGTCCT 658
Query 199 -------------------------------------------------------------------------- 198
Sbjct 659 GCAATAGTGGAGGTGGAGCAGAGGGTATGAGCTGGGAAGCAAATGGAGCAGGAGCTGGAGGCTGCCCCATCCAC 732
Query 199 -------------------------------------------------------------------------- 198
Sbjct 733 TCCAAGCCAGAGAACAAGCAGAGGCTGCCACAGGAGATCCTGGGCAAGTAATCAGCCACAGCATCTAGATTAGC 806
Query 199 -------------------------------------------------------------------------- 198
Sbjct 807 ATGAAGGAAACACTGGCCAAATTAAAAGATGAAACTTCCAAAAGAGTCTCGATCTATTGCCCAGGCTGCAGTGC 880
Query 199 -------------------------------------------------------------------------- 198
Sbjct 881 AAAGGTGCAGTCTCGGCTCACTGCAACATCCACCTTCCGGGTTCAAGCAATTCTCGTGCCTCAGCCTCGCGAAT 954
Query 199 -------------------------------------------------------------------------- 198
Sbjct 955 AGCTGGGATTACAGTGCAAAGGGGAAGAGTCAGAAGGTGAATAAATACTCACAGCCGAAGCTCTTCAAAAGACT 1028
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1029 TCACCGAGTACAGAGGGGAGTTTGGATCCCGCTGCAGGACTTCCACTTGGTTTGTGTTATCAACAAGGTTGCTT 1102
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1103 CTGATCAGCTTGTTGAGTAAGGACTGGGCAGCTCTGTCCTCTGTCAGGAAAAAGAAAGCAAAGAATTTTAAAAA 1176
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1177 GTCCTTGAAACCTACCAGGCGTTTACTCTAATTCAACTGCCATTTGTATTTTAAATAATAATGTACTGAACATT 1250
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1251 CAAATTCAAGGTACGTCATAGTTTTGACTTATAAATTAAAATAGTTTTATTAAAGAAAAAAGTTATGATACATC 1324
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1325 ACCCATTTAGGCCTCATATTCTTTTCCAGACTCTATTCTAACAGCCCTCTTTTCCTGCAGTTATCTATTCCTCC 1398
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1399 TATCCAGACCCACATATTTACTCCCCAATTTGTACTATATATAAACCTAAAGTAATTAATGTAGCAATCACAAA 1472
Query 199 ------------ 198
Sbjct 1473 AAAAAAAAAAAA 1484
