Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_102347.2
- Aligned Length:
- 4085
- Identities:
- 167
- Gaps:
- 3895
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCCGAGCGGGTTTGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGATGGAGGCGGTGGTGTTCGTCTTCTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAACGCCTTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGGGACACGGCTGAGGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCT 2072
Query 1 -----------------------------------------------------------ATGGAGTCTCACTCT 15
||||.||||..||.|
Sbjct 2073 TGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGT 2146
Query 16 GTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTC 89
||..||||||||||||||||||||.|||||||..||||||||||||||||||.|.||||||||||||.||||||
Sbjct 2147 GTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTC 2220
Query 90 CCACCTCAGCCTCCCAAGTAGCTGGGATTACAG--ACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAG 161
|..||||||||||||||||||||||||||||.| | ||.|| .|||||.|||||||||.||||||||
Sbjct 2221 CTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTA-----GCTAC---TCCTGGCTAATTTTTGTATTTTTAG 2286
Query 162 TGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------------------- 198
|.||||.||.||||||||||||||||||||.||||||
Sbjct 2287 TAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTC 2360
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2361 TCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCA 2434
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2435 CCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTT 2508
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2509 ACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTA 2582
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2583 CTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAA 2656
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2657 GTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGA 2730
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2731 GTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCC 2804
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2805 AAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCC 2878
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2879 TAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGT 2952
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2953 GAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCAC 3026
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3027 TGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACC 3100
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3101 TTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAAC 3174
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3175 TGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCT 3248
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3249 AGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACT 3322
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3323 GGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTA 3396
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3397 GAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTG 3470
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3471 GGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAG 3544
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3545 TCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATA 3618
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3619 GACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCA 3692
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3693 GTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGC 3766
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3767 TCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACC 3840
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3841 TGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTA 3914
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3915 TCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCAT 3988
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3989 TCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATTGTT 4062
Query 199 --------------- 198
Sbjct 4063 GAGTGAATAAGTAAA 4077
