Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_104404.2
- Aligned Length:
- 3440
- Identities:
- 173
- Gaps:
- 3243
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTCCGGTGTTACCTGTGTCGTTACCGGGAGCTGTAAACAAGGTGTGCAAGCATCTGAAGAGCTGCCGGGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCAGAGAGGAGCAGCTGGAAGCCGTGGCTGCGCTCTCTTCCCTCTGCTGGGCGTCCTGTTCTTCCAGGCACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCAGGAGGAGGAAGAGGCGTGTATGGCGAGGCTTTGTGTCCGTTGCGCTGAGTGCCTGGATTCAGACTATGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGACATATTGATGAAAGTCTGTATGACACAAGAAGAGTCACCTAAAGACAGGAAACATCCCATTCCACTGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTAAAGCCTGTCAGAGAAAGTGGAGCTGGCCTGGACCATAGCGATGGACAATCCTGGAGATCATCAGTAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTTAGGAACCACTTATTTATTGAATAAATGTTCTTGTTGTATTTATAAACTGTTCAGGAACTCTCATAAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCATGACTTCCCCTTTCAATGAATTATGCTGTAATTGAATGAAGAAATTCTTTTCCTGAGCAAAAAGATACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTTGATTCATCTTTGCTCTGGAATGTATTACATGTTTTCTTCCAACTGTTTGAAGGAGAATTTTGAATGTTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCACACCGCTGATACCCAAATAATTTTTTAAATGAAGTGGAGCTTGTGGCTTCCTGATGTGTCACCAGACAAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATTCGCTTGGGATATGTATTCTTTGTTTTTTGCTCCATGTACACTTTCAGCTGTGAGTTAGTATAGGGCGTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTTACCGGTTTAATGACCTCAACCTCAGTTGTGTTTGGATAACTTAGGGTGTATACCCTTAGTTTCCTTAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGGTAGGATCAAGTCATTGGTTTGCTTTGACTGGGTTTTTAAAGTATTAAGTACAGTGTCATCAATTTACAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAAGGAAAGGAATCGTGAAGTAGAAAAATTATTTTCTTTAGTCTTGCTGGTACAATTTGGGCTAAGGAGTCTTT 962
Query 1 ------------------------------------------ATG--GAGTCTCACTCTGTCACCCAGGCTGGA 30
|.| ||||||||||||||| .||||||||||
Sbjct 963 GTTATTTTCTGTCTTGCTTTTTTTTTTTTTTTTTTTTTTTTGAGGCAGAGTCTCACTCTGTC-GCCAGGCTGGA 1035
Query 31 GTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCC 104
|||||||||.||||||||||||||||||||||||||||||||||||||||||.|||||....||||||||||.|
Sbjct 1036 GTGCAGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTTGTGCCTCAGCCTCTC 1109
Query 105 AAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCAC 178
.|||||||||||||||||.|.||.|||||||.|||..|.|||||||||..||||||||.||||.||.|||||||
Sbjct 1110 GAGTAGCTGGGATTACAGGCATGCGCCACCACACCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCAC 1183
Query 179 CATGTTGGCCAGGTTGGTCT------------------------------------------------------ 198
|||.|||||||||.||||||
Sbjct 1184 CATTTTGGCCAGGATGGTCTCAATCCCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGTTGGGATTA 1257
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1258 CAGGCATGAGCCACTGTGCTTGGCCTGTTATTTTATTTTCTTATAACTACAACTTTTCTTCTTGAATTTTCAGG 1331
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1332 TCAGAGGCAAGAAAAACTCTTTACAGGTTTTTAGTGGGGGGCTTATGGAGTATTTCAGGAGTTCTTTGCAAATT 1405
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1406 AAATCATCTTTTCACTTGTATTGTTTTTCAAAACTTTGTTGATTTCTAAAATGTGCCAACTGTGAGTAAACTAT 1479
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1480 GGTATTTGCAAGTGGTTTTTACATAATATTTGAGATGAGGAAGTGAGATTGTGCATGACATACTTCTCCTTTGT 1553
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1554 ATTCTCTCAGTGCCTTACAGCAGGTTACTCCATTCTGCTATGACAACTTGTTTCAAATGTTAATTTACATAGGA 1627
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1628 TTTTTTATAAGCCATTAAGGCATATGTATAGTATATCAGTAAAGATGGATGGTGCATATATAAATAGTCTTCTG 1701
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1702 TAATAGTGATTGGATTTACTTCTCAATTATGAGAGACAAAAATTATCCCCTCACCTGTCTCTATTCTTTCAACA 1775
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1776 GGTTGATCCCTTTTCATGATTTTTCATTAGGTGGTTCAGGAAGTTTCCATATTACAGCGCTTCAGACTGTATAT 1849
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1850 GTTAGTTTAAAAATCACTTTTCTCTCTCTCAACTTCTTTCTTTTTTTTTTGAAGACTTAATTTAAAAAATTTGG 1923
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1924 GTTGTTAGATCCGTATCATAGATTTGGCCTAGCCTCTTCTGTTAACCTAGTCCACAGATGAGCGAATCTGGTTA 1997
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1998 GTTGAAGGACATTGTGATTTGACTCTGGTCACGCGAGGAAGTAGAAGGGCAAAGACAGGACCGGCAGTTTACAT 2071
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2072 TTCCAGTGGTTAAACCTCACGGTACTTTGGGACTGCTTGTTAACTTTTGTGGTTGTCTGAGGCCAATCTAACGT 2145
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2146 GACCATTTCTGACACCTCAACAGAGAGAGGAAAGCAACTTGAGCAATGAGAGTAAATAACTTGGGCTCTCAGAG 2219
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2220 ATTTGAAGATAGAGATCTCATTGTGAGGGGGACTATTTTGCAGGTCCTCATTTCTCCAAGAAAGAGATGGTGTT 2293
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2294 ACAGGAACCCACTGAAAGCCATATCCCATTAAATGAGGAACTAATTTTGGCTGGGCCTTCTTGTAATGTCCTCG 2367
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2368 CAGGTGTGTTGTGAAGATTAATGCAGGGTAGTATGTTTGTAGATTGACACCTAGTCTAAACTTGAGGTAATTGG 2441
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2442 TGCTCTGTGAATACTCAGTCGTGTTCTTTTATAGCCTTAATCATGATTTGAACTAGTCCCTTGCTTTTTAAATG 2515
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2516 ACTGAATGAAGTCCTTCGTGGTAAGGGAGTACGTTGATAACTTAGTTTACTATATGGGTTTGTGGTCGCATCCC 2589
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2590 AGTCATCAGCTGCTATCATTTTCCTTCTTCATCCCTTATACTGAGATTTGGGTTACAGCTTTTTATTCTTCGAA 2663
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2664 GGATCACAAAGCAGTGTACAGACACCTGCCTTCTTTAAGGATGAAAGGAAGATAAAGTGGTCTTTTTTTGTTTA 2737
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2738 CTTATTTGTTTCACCTCTTGTTTGAGTAACTTCTAAGGTGCTATTCTCTCTCTCTTTTTGCTACCTCATGAGCT 2811
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2812 CTTGTCACAGCCATGGAAACCAGCCTCGTTTAGAAAGGGAACTTAGTTCAGAAGGGGTTAAAAGCCTTCCAGAA 2885
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2886 TTTTTCTTTAGCTGCTGAAGTTTTTACATGTGGTTACATGACTTTAAGTTTTATGCATTACGCTCTTAATTCTA 2959
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2960 TTACAAAATGTGGACTCACCAATTGCTTTGTGTTTTCCATGTGACCTGTTACTTCAGGCTACTTGGGGAACATC 3033
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3034 TTAGTCCTCTGTAGCTCCTGAACCCAGCACTGGTGCTTCAAGAGAGAAGGTAGCACGTCTTTGTTCAAAACAAA 3107
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3108 ACAAAACGACACTTCTGGAGGCCACATCCTGAATATGAATGTTCTACTAAGTCACTCAGTTATGGTTCTAAAGG 3181
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3182 GAAACTGTAAGAAGACCCACAAGGAGTGGACCAAGACTATTATTTAATTGCACAACTTGAAACTTTGCTGCCAG 3255
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3256 AAGAGGCAGCTCCATTCCTTTGACTCCAGTGTTGGGCTGTTAACTGCTGCACCTCATTGCCTTTTTTTGTTTTT 3329
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3330 GTTTTTGTTTTGTAGGAGGGTAGGCACTGTTGGGCCATATGCACAAATATTGTAACTCTTGGTATCTTTACTGC 3403
Query 199 ------------------------------------ 198
Sbjct 3404 ATCATAGTCAATAAACTTCTTTGTACCCTTTGGCTA 3439
