Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_104404.2
Aligned Length:
3440
Identities:
173
Gaps:
3243

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTTCCGGTGTTACCTGTGTCGTTACCGGGAGCTGTAAACAAGGTGTGCAAGCATCTGAAGAGCTGCCGGGATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGCAGAGAGGAGCAGCTGGAAGCCGTGGCTGCGCTCTCTTCCCTCTGCTGGGCGTCCTGTTCTTCCAGGCACT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GATCAGGAGGAGGAAGAGGCGTGTATGGCGAGGCTTTGTGTCCGTTGCGCTGAGTGCCTGGATTCAGACTATGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAGACATATTGATGAAAGTCTGTATGACACAAGAAGAGTCACCTAAAGACAGGAAACATCCCATTCCACTGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCTAAAGCCTGTCAGAGAAAGTGGAGCTGGCCTGGACCATAGCGATGGACAATCCTGGAGATCATCAGTAAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACTTTAGGAACCACTTATTTATTGAATAAATGTTCTTGTTGTATTTATAAACTGTTCAGGAACTCTCATAAGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACTCATGACTTCCCCTTTCAATGAATTATGCTGTAATTGAATGAAGAAATTCTTTTCCTGAGCAAAAAGATACT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTTTGATTCATCTTTGCTCTGGAATGTATTACATGTTTTCTTCCAACTGTTTGAAGGAGAATTTTGAATGTTTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCACACCGCTGATACCCAAATAATTTTTTAAATGAAGTGGAGCTTGTGGCTTCCTGATGTGTCACCAGACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TATTCGCTTGGGATATGTATTCTTTGTTTTTTGCTCCATGTACACTTTCAGCTGTGAGTTAGTATAGGGCGTAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACTTACCGGTTTAATGACCTCAACCTCAGTTGTGTTTGGATAACTTAGGGTGTATACCCTTAGTTTCCTTAGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTGGTAGGATCAAGTCATTGGTTTGCTTTGACTGGGTTTTTAAAGTATTAAGTACAGTGTCATCAATTTACAGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TAAGGAAAGGAATCGTGAAGTAGAAAAATTATTTTCTTTAGTCTTGCTGGTACAATTTGGGCTAAGGAGTCTTT  962

Query    1  ------------------------------------------ATG--GAGTCTCACTCTGTCACCCAGGCTGGA  30
                                                      |.|  ||||||||||||||| .||||||||||
Sbjct  963  GTTATTTTCTGTCTTGCTTTTTTTTTTTTTTTTTTTTTTTTGAGGCAGAGTCTCACTCTGTC-GCCAGGCTGGA  1035

Query   31  GTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCC  104
            |||||||||.||||||||||||||||||||||||||||||||||||||||||.|||||....||||||||||.|
Sbjct 1036  GTGCAGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTTGTGCCTCAGCCTCTC  1109

Query  105  AAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCAC  178
            .|||||||||||||||||.|.||.|||||||.|||..|.|||||||||..||||||||.||||.||.|||||||
Sbjct 1110  GAGTAGCTGGGATTACAGGCATGCGCCACCACACCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCAC  1183

Query  179  CATGTTGGCCAGGTTGGTCT------------------------------------------------------  198
            |||.|||||||||.||||||                                                      
Sbjct 1184  CATTTTGGCCAGGATGGTCTCAATCCCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGTTGGGATTA  1257

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1258  CAGGCATGAGCCACTGTGCTTGGCCTGTTATTTTATTTTCTTATAACTACAACTTTTCTTCTTGAATTTTCAGG  1331

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1332  TCAGAGGCAAGAAAAACTCTTTACAGGTTTTTAGTGGGGGGCTTATGGAGTATTTCAGGAGTTCTTTGCAAATT  1405

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1406  AAATCATCTTTTCACTTGTATTGTTTTTCAAAACTTTGTTGATTTCTAAAATGTGCCAACTGTGAGTAAACTAT  1479

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1480  GGTATTTGCAAGTGGTTTTTACATAATATTTGAGATGAGGAAGTGAGATTGTGCATGACATACTTCTCCTTTGT  1553

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1554  ATTCTCTCAGTGCCTTACAGCAGGTTACTCCATTCTGCTATGACAACTTGTTTCAAATGTTAATTTACATAGGA  1627

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1628  TTTTTTATAAGCCATTAAGGCATATGTATAGTATATCAGTAAAGATGGATGGTGCATATATAAATAGTCTTCTG  1701

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1702  TAATAGTGATTGGATTTACTTCTCAATTATGAGAGACAAAAATTATCCCCTCACCTGTCTCTATTCTTTCAACA  1775

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1776  GGTTGATCCCTTTTCATGATTTTTCATTAGGTGGTTCAGGAAGTTTCCATATTACAGCGCTTCAGACTGTATAT  1849

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1850  GTTAGTTTAAAAATCACTTTTCTCTCTCTCAACTTCTTTCTTTTTTTTTTGAAGACTTAATTTAAAAAATTTGG  1923

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1924  GTTGTTAGATCCGTATCATAGATTTGGCCTAGCCTCTTCTGTTAACCTAGTCCACAGATGAGCGAATCTGGTTA  1997

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1998  GTTGAAGGACATTGTGATTTGACTCTGGTCACGCGAGGAAGTAGAAGGGCAAAGACAGGACCGGCAGTTTACAT  2071

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2072  TTCCAGTGGTTAAACCTCACGGTACTTTGGGACTGCTTGTTAACTTTTGTGGTTGTCTGAGGCCAATCTAACGT  2145

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2146  GACCATTTCTGACACCTCAACAGAGAGAGGAAAGCAACTTGAGCAATGAGAGTAAATAACTTGGGCTCTCAGAG  2219

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2220  ATTTGAAGATAGAGATCTCATTGTGAGGGGGACTATTTTGCAGGTCCTCATTTCTCCAAGAAAGAGATGGTGTT  2293

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2294  ACAGGAACCCACTGAAAGCCATATCCCATTAAATGAGGAACTAATTTTGGCTGGGCCTTCTTGTAATGTCCTCG  2367

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2368  CAGGTGTGTTGTGAAGATTAATGCAGGGTAGTATGTTTGTAGATTGACACCTAGTCTAAACTTGAGGTAATTGG  2441

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2442  TGCTCTGTGAATACTCAGTCGTGTTCTTTTATAGCCTTAATCATGATTTGAACTAGTCCCTTGCTTTTTAAATG  2515

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2516  ACTGAATGAAGTCCTTCGTGGTAAGGGAGTACGTTGATAACTTAGTTTACTATATGGGTTTGTGGTCGCATCCC  2589

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2590  AGTCATCAGCTGCTATCATTTTCCTTCTTCATCCCTTATACTGAGATTTGGGTTACAGCTTTTTATTCTTCGAA  2663

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2664  GGATCACAAAGCAGTGTACAGACACCTGCCTTCTTTAAGGATGAAAGGAAGATAAAGTGGTCTTTTTTTGTTTA  2737

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2738  CTTATTTGTTTCACCTCTTGTTTGAGTAACTTCTAAGGTGCTATTCTCTCTCTCTTTTTGCTACCTCATGAGCT  2811

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2812  CTTGTCACAGCCATGGAAACCAGCCTCGTTTAGAAAGGGAACTTAGTTCAGAAGGGGTTAAAAGCCTTCCAGAA  2885

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2886  TTTTTCTTTAGCTGCTGAAGTTTTTACATGTGGTTACATGACTTTAAGTTTTATGCATTACGCTCTTAATTCTA  2959

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2960  TTACAAAATGTGGACTCACCAATTGCTTTGTGTTTTCCATGTGACCTGTTACTTCAGGCTACTTGGGGAACATC  3033

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3034  TTAGTCCTCTGTAGCTCCTGAACCCAGCACTGGTGCTTCAAGAGAGAAGGTAGCACGTCTTTGTTCAAAACAAA  3107

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3108  ACAAAACGACACTTCTGGAGGCCACATCCTGAATATGAATGTTCTACTAAGTCACTCAGTTATGGTTCTAAAGG  3181

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3182  GAAACTGTAAGAAGACCCACAAGGAGTGGACCAAGACTATTATTTAATTGCACAACTTGAAACTTTGCTGCCAG  3255

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3256  AAGAGGCAGCTCCATTCCTTTGACTCCAGTGTTGGGCTGTTAACTGCTGCACCTCATTGCCTTTTTTTGTTTTT  3329

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3330  GTTTTTGTTTTGTAGGAGGGTAGGCACTGTTGGGCCATATGCACAAATATTGTAACTCTTGGTATCTTTACTGC  3403

Query  199  ------------------------------------  198
                                                
Sbjct 3404  ATCATAGTCAATAAACTTCTTTGTACCCTTTGGCTA  3439

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