Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_110729.1
- Aligned Length:
- 3263
- Identities:
- 171
- Gaps:
- 3065
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTTGTCTGGTGGTGGAAGGAGGGGGTGGCTGCGCCCGCCATGCTGGGGCTCGTGTTTTTCTCTTCCGCTTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTTTGGTGAAATGGGCTGAGGAAGGGGGAATTGAACTGAGAGACTCCTTGTCCGTCCCCCATTTCTTTCTTT 148
Query 1 ----------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGC 58
||||||||||.|||||||.||||||||||||||||||||....||.||.|||||||||
Sbjct 149 TTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGGACAATTTTAGCTCACTGC 222
Query 59 AACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCA 132
||||||.||||||.||||||||||||||||||..||||||||||||.||||||||||||||||..||...||||
Sbjct 223 AACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACATGCGCCCGCCA 296
Query 133 CCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGT------CT-- 198
|||.||||||.|||||||||.|||||||||.||||.||.|||||||||.||||||||||..||| ||
Sbjct 297 CCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCACGTTGGCCAGGCCGGTACCGAACTCC 370
Query 199 -------------------------------------------------------------------------- 198
Sbjct 371 CAACCTCAGGCGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGACACAGCGCCTGGCCT 444
Query 199 -------------------------------------------------------------------------- 198
Sbjct 445 GTCCTTTTTATGTATTGCCATATTTTCTTTTCTTTTCTTTTCTGTGAGATCCCTGTTGAGTTTTGTTAACAAGG 518
Query 199 -------------------------------------------------------------------------- 198
Sbjct 519 CTATGCTGATATAATGTGTGGAGAAGTGTTCTCTCTTTTTCTATTCTTTGAAAGTGCTAGTGTAGGATTGATGT 592
Query 199 -------------------------------------------------------------------------- 198
Sbjct 593 TATTTATTTTTTATGTGTTTGGAAGAAGTCACCAGCCATCTGGACCTAGAGTTTTCTTTGTGGAAAGACTTTAA 666
Query 199 -------------------------------------------------------------------------- 198
Sbjct 667 ATTACAAATTCTATTTCTTTTATAAAAATACAACTATTCAGATGTTCTATTTTATTTCTGGGTCTCACTCTGTT 740
Query 199 -------------------------------------------------------------------------- 198
Sbjct 741 ACGCAGGCTGGAGTACAGTGGCACATTCTTGACTGACTGCAACCTCCACCTCCCAGGCTCAAGCGATCCTCCCA 814
Query 199 -------------------------------------------------------------------------- 198
Sbjct 815 CCTTGGATCTGCTTTGTCTCTATTGTTTTTTCTGCAGGTGCTGGGAGAGTACTTGTTGGCATATGCTGATGGTC 888
Query 199 -------------------------------------------------------------------------- 198
Sbjct 889 ATCTGCATGATTGGACTCTTCCATATCTGCTCCAGAAGCTTGAGTGTCTCCACTACAGGAAGAGTCTTTGTCAT 962
Query 199 -------------------------------------------------------------------------- 198
Sbjct 963 TACTGGTTTTAGAAAAGCTGTCCTCAGAGCCACCATTTTTCTTGATGCCTTTCACGGTGACAACGGCCAGCACT 1036
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1037 TGCCCTGAGGACATCTCTTCAGGAAGCTCTGCTACAAGAATGGCGAAGCAATCTTTTTTCTTGGCATCTCATTT 1110
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1111 TGCCCTGTGAAGAGATAGGGCTGCTTCTGGGGACTTTTCACTGATCACCATCCCCGCCAGGTCATCCTTGAAAT 1184
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1185 CATTTACCTGGACTCCCTAGGGTGCCTTCACATTACATGGGGCCTCCTTTTCCTTGATGTTGTTGGCAAATTCT 1258
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1259 TTCACTGGATTATCTATGGGAACTTTTTCCTTGGCACATTTGTCGGCATTCAGATCCAGTGGAGCATCCTCATG 1332
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1333 TGAGCTTTCGTTGGTGAGGTCTTCCACCAGGGTATCCTCCATGGGAACTTTTTCCTTGGCTCATTTGTCAGCCT 1406
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1407 TTAAATTTAGCAAAACATCCCCATCTGAGCTTTTGTTGGCAAGGTCTTCCACCAGGGTATCCTCCGTGGGAACT 1480
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1481 TTTCCTTGGTGAATTCATCAGCCTTCAATCCAGTAGAGCGTCCTCATCTGAGCTTTCATTGGCAAGGTCTTTCA 1554
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1555 CCAGGGTATCCTCTGTGGGAACTTTTTCTTTCATGCGTTTGTCAACCTTCAAGTCCAGTGAGGCATCCTTATCT 1628
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1629 GAGCTTTCGTTTCCAAGGTCTTCCACCAGGGTATCCTCCATGGGAACTTTTTCCTTGGCACGTTCTTTGGCCTT 1702
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1703 CAAATCCAGTGGGGTGTCCTAATCTGAAATTTCATTGGCGAGGTCTTCCAGAGGATCCTCCATGGCACCTTTTT 1776
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1777 CCTTGGCACATTCATTGGCCTTCCAAAGCCATGGGGCATTTTCATCTGAGCTTTCACTGGCTTGGTATCCTTCC 1850
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1851 AGGATATCTTCCATGTGAACACTTGCCTGAGTTGCTGAGTCTGTCAAGTGAACAGCAAGAACCTGTTCAGAGGA 1924
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1925 AGTGTCGCTGGTCTGCTCCCCTGCCAGGTTGTCCTTGAAATCTTCAGATGGCTACCTGCCAGGGTGCACATGAG 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 GATGACACCTGCGGTGGCACATTCTCTCTCTAAAACTGCGCTGGCAGACCATGGATTCGCCATGGACAGTGGAG 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 TCTCCTGAAACCTGAGTATCCACTGCTGCATCTTGGAGGCAATACTCTAGCCTTCACGAGCACCCTTCTACTCC 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 AGTCAGGCTGAAGTCTCCCTCGCTGTCACCGCCACAACTGTAGGAGGTGAGCCACAGAGCCGTGCCATCTGCAA 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 GCTCCAAACTCCACCTCACCACAGGTGACTCCTCCTTCACTTTCTCCTCCAGCCTTTCTCAGAGTGGCTGGGCG 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 GGCAAAGCCAGAAAAGCCACTCTGGCCACACTGCAGCCTCTGTTGCCACCACCAACTGCAGTGAGGCAAGCCAT 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 GGTGCCACAGGCTCCAACCTCCAGCATGTGGCAGGTGATTCCCCTTCCCCTTCTCCTGGTTCTCTAAGCCAGGA 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 ACAGAGTAGCTCGGTGGGCAGATACAGAAGAGCCTAAAATCTGTTGTACTATTTTAAGAAAAACTTCTCTTGCC 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 TGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCCAAAGTCAGGAATTCAAGACCAGCCTGGCCAA 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 CATAGCAAAACCTCATCGCTACTAAAAATACAAAAAACAAAAAACAAACAAAAAAAAATTAGCTGGATATTGTA 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 GTGCGTGCCTGTTATCCCTGCTCTTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGTGTTAGAATCAAAAT 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 GCTTGTTTCTTGGTGTCGCAAGGAAAAATTAGCATTCAGACAAAAAGTTTTCTCAGCAAGGCAATTTTACTTTC 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 TGTAGAAAGGGTGCTGCCCATCAGCAATCCTGCCAGGAGAGCACAATGAACAAAGAAAGGCAGGAATATTTATC 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 CCTTATGCATTGGGTCCTTACTGCTGTGTCCTGTCTCCATTGGTTGGAGCTGGACCTCACAGTCTAAGCTAAAC 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 CCAATTGGCTAACAACTTAAAAAACTTTCTTAAATAGGTAAAGGCAATGGAGAACAAAGGAAAAGAGGAAGTTG 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 CTTGCCAAAAGACTTGGAGAAGTAATAACATTTCCAAATAAGGAAAGGGCATAAGCTGTGAGCTGGGACATGCT 3108
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3109 TGAGCACGTCGAGACCAAATATCTTGGTTAACGTACAAGGACACAGAAGGTACTTATTTCCTTATATCTAACAA 3182
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3183 CTACATAAGATATGGTTTAAAAAAGAGTTACTAACACAAAGCAAAGAGGCTTAAAAAAAGTTAATTAAAAATAT 3256
Query 199 ------- 198
Sbjct 3257 TATTTCT 3263
