Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_120540.1
- Aligned Length:
- 2338
- Identities:
- 174
- Gaps:
- 2143
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTTTCCCTCGACCTCGTTTTCTCACCGGGAATATGGGAAGAAAACGCACCCTTACCTCCCCCGAACCCTGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCATAAGAAATAGGATTAAGCTTTTCAAAGCCGGCAAGTTGAACTATTTATACTTACCAGAGACAAGGCCTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTGTTACACAGGCTGGAGTGCAGTGGTGTGATCATAGCTCACTACAACCTTGAACTCCTGGGCTCAAAGAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCGGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGCACATATTACCATGCCTGACTACTTTTAAAACTTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTTCCTAAGAGATAGGGTCTAGCTATGTTGCCCAGGTTAGTCTTGAACTCCTCACCTCAGCCTCCCAAAGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGATTACAGGTGTAATCCCACCACACCCAGCCCCATATCTGTTTTTTAAACTTTTTTTCCAGTGATCTTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGACTTTATACTTTCTCTCTTAATAGAGCACAGAGTGAGCAGAAGTAAACAAAATAGACACTAGAAAAACAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAAAAGATCAATGAAACTAAGTGGTGGCTTTTATAAAAGCTAAAAAAATCAATAAACCTTTAACTAGACTAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGAAAAAGAGAAGACGTGAATAAAATCAGAAATGAGAAAGGAGACATTACAATTGATACAACAGAAATAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGATCATGAGGCTACTCTGAACAATTATAACCAACAAATTGGATTAACTAGAAGAAATGGATAATTTCCTTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACATAAAACCTACCAAAATTGAATTATGGAGAGAAAGAAAATCTGAATTGACCAATAACAGGTAGGAGACTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCAGTAGTAAAAAGTCTCTCATCAAAGAAAAGCCCAGGACCACATGGTTGCACTGGTGAATGCTACCAAACAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTAGAGAATATTCCTTGTTTGAATATTTTTGATTAGTGATTCAAACTGCTTACTCATTATTGGTCTATTCAGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTCTATTTTTCATGGTTCAGTCTTCCTAGGTTGTATGTGTCTAGGAACTTAACCATTTCTTCTAGGTTATCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTTGCTGGCATGTAATTGTTCATAGTAGTCTCTTAAGATCCTTTGTGTTTCTGTGGTACCCATTGTAATGTCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTCTTTCATTTATAGTTATTTGAGTCTCCTGTCTTTCTTAGCCTAGATAATGCTTTGTCAATTTTCGTTTTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAAAAAATTTAGTTCACTGATCTTTTCTTTTGTTTTTCTAGTCTCTATTTCACTTGTGCTCTAATCTGTATTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTTCCTTACCTCTGCAAACTTAGTTTGTTCTTGTTTATCTAGTTCCTTCAGATGGAAAGTTATTTATTTAAGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTCTTTTTCTTAATTAGGTATTTATTGCTGTCACTTTCCCTCTTGAACTCCTTTTGCTGCATCTCATAAATG 1406
Query 1 ----------------------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTG 28
||.|| |||||||||.|..||||||||.
Sbjct 1407 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAGA-TCTCACTCTTTTGCCCAGGCTT 1479
Query 29 GAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTC 102
|||||||||||.||||||||||||||||||||||||.||||||..|||||||||||||||||||||||||||||
Sbjct 1480 GAGTGCAGTGGTGTGATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCCACCTCAGCCTC 1553
Query 103 CCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGA-GGGAGT 173
||||||||||||||.||||| ||| |||||.||..||.||.||.||||||.|||||||||.|||| |||.||
Sbjct 1554 CCAAGTAGCTGGGACTACAG--GTGCCTGCCATCACGCCCGGCTACTTTTTGTATTTTTAGTAGAGATGGGGGT 1625
Query 174 TTCACCATGTTGGCCAGGTTGGTCT------------------------------------------------- 198
||||||||||||||||||.|.||||
Sbjct 1626 TTCACCATGTTGGCCAGGCTAGTCTTGAACTCCTGACCTCGAGTGATGTGCCAGCCTTGGCCTCCCAAAATGCT 1699
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1700 GAGATTACAGGCATGAGCCACTGCACCTAGCCACATCCCATAAATTTCGGTATGTTGTGTTTCCATTTTCATTT 1773
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1774 GTCTTAAGATATTTCTGATTTCTTCTTTGACCCATTGGTTGTTCAGGAGTGTTAATTCCACATACTTGCAAATT 1847
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1848 TTCCAAGTTTTCTCCTGTTAATTATTTCCAGTTTCATACCAGTGTGTGAAACCTTTCCTTGATGTAGTAATAGA 1921
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1922 TATAAATACACACATATGTATAGGTTTCCATCTATGATTCCTGGCTCATAACTCCCAGAGTCCTTGTTACAGTC 1995
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1996 TTTTGTTACAATGTTGGTATGTTAGGCCTCTCTGACTTTCTCCAGTGTTCCTTTCACCTGCCCCAAGGCAGGTC 2069
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2070 TGTAATCTGATTGTGGGTCATAAGACCACCATTCCAGAGAGGGTCCCATCCCATACCCTGGGGGAAGGAATGCT 2143
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2144 AACGTCACGAAGCTTCTATAAAAAGCCAGGATGACTGGATTTAGAGAGCTTCTGGATAGCTGAACACATGCAAG 2217
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2218 TTCCTGGAGGGCAGCTCGCCCAGGGAGGGCATGGGAGTTCTGTGCCCCTTCCCCCATACCTCACCCTGAGCATC 2291
Query 199 -------------------------------------------- 198
Sbjct 2292 TCTTCATCTGTATCCTTTGTAATAAAATAAATTGGTAAACATGT 2335
