Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_121578.1
- Aligned Length:
- 3733
- Identities:
- 174
- Gaps:
- 3536
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAGAGCTATGTTACATTGAATGGCAAAAGTGACTTTGTAGAGGTGTCGTTTATCCGGATGCTGCATGATTAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCACCATACTCTTATCAAGCATACAGGTGTTAATGTCTATTTTAAAGAGGAGAGAACTCAAGAAGTTCTGTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACTGCTTTCTTCATCATATCTCAAAGGATTTGCTGAGGATTTCAGAGGTGCCACGAGTTGAGAGAAGACTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGACATTTCACTTAATGCTGAAAATTCACTCTACTGCCACTACTCAGGACTTCTGATGGGCATGAAAATCCAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGCTTTATGATATTAACCTCTGAATTTCATAAACCGCTTAAAACTTTAGAATGTCCAGAAAACACTGGTAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATACGGACACATGAGACAAGGCCAGAAAGGAAGTCAATAAAATGTGATTACTAAGCAAATTACCACCAGAGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGAAGGAAATCCCTCTTCAATATTTTGAGAGACAGTAAAGAACATTCCCTGGAGTTAGGACAAATGAAGAGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAAGTTTCATCTTGCTCTGTCATCCAGGCTGGAGTGCAGGGGCACCATCTCGGCTCACTGAAACCTCCACTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAACTGGGGTTACAGAGTGAATAGACAACCTACAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGGAGAAAATACTTGCAAGCTATGTATCCAACAAAGGACTAATATCGAGAATTTACAAGGAACTCAAACAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCAACAAGAGTAAAACAACCCCAATAAAAAGGAAAGTGAACACATTTGGAAATATTGGCTCAGCATTGCAGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATACCCTTTAGACAGGAAACACACTTTCCAGTTCTCCTTGACAGAGAGGCTGAAGCTGCTTATGTGTCTGGAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCACGGACCCTCGCGTGAAGCAATACAGGCATTCATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTGGACAAAAGGAATAAGTGGACTACATGCAGAGGCAGAGTGAGGCTGGAAAATACATCCTGCCATGGGTATA 1036
Query 1 -----------------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTG 33
|.||||||||.|||||| ..|||||||||||||
Sbjct 1037 CAACCCAAGCTATCTATGTAGATTTTTTTTGTTTTTTTGAGACGGAGTCTCGCTCTGT-TGCCAGGCTGGAGTG 1109
Query 34 CAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAG 107
||||||||.|.|||.||||||||||||||||..||||||||||||||||.|||||||..|||||||||||||||
Sbjct 1110 CAGTGGCGGGGTCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAG 1183
Query 108 TAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCAT 181
|||||||||||||||.|.|||||||||||.|||||.|||||||||.|||||.|||.|||||||.||||||||||
Sbjct 1184 TAGCTGGGATTACAGGCATGTGCCACCATGCCTGGCTAATTTTTGTATTTTCAGTAGAGAGGGGGTTTCACCAT 1257
Query 182 GTTGGCCAGGTTGGTCT--------------------------------------------------------- 198
|.|.||||||.||||||
Sbjct 1258 GGTAGCCAGGCTGGTCTTGCACTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTGCAG 1331
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1332 GCATGAGCCACCACACCTGGCCTATGTAGATTTTTTTGTTGCCTTTTGATTTTTTTTTTTTTTGCTTATTCTGA 1405
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1406 TTCTAATTGTACAAATCAATAATAAAAATGTTAAAAACAGACTTAAAATATTCATGACTATGCAAATGATTCAA 1479
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1480 ATATAGTTATTTAAAGTTTCTTTCTTTTTTAAATTGGGACATGGTCTTGCTCTTCAACCCAAGGCTGGGTGGCA 1553
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1554 TAGGTGAAAGAGCAAGACCAAGGCATGACCAAGGCTCACTGCAGCCTTGACCTCCTGATCTCGTTATCCTCCCA 1627
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1628 CTTCAGCCTCCCAAGTAGCTGGGTATAGGCATGCACCACAGTCCCCAGCTAATATTTTAATTTTTTGTGTGTGG 1701
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1702 AGACATGGTCTTGCCCTGTTGCCCAGGCTGGTCTTGAATTCCTGAGTTCAAGTGATCCTTGCTTCTCAGGCTCC 1775
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1776 CTAAGTGCTAAGATTACGGGTGTGGGTCCCCAGCCAAAACAATCTTCCTAGGGAAGCCCTCACATTTTCAAGGG 1849
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1850 TTTTACCTTTAGTACCTCCATAAATTCGTATCAAGCAACAAAATGTACTGTCAAGGAACAAAAAATATAAAGGG 1923
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1924 ACCTTAAATGCATATTTCTAAGACCAAGAAGTCAGTCTGAAATGGCTACATACTATATAATCCTATATGACTCC 1997
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1998 TATATGAAAGATATGACATTCTGGAAAAGGCAGAACAATAGAGTAAAAAGATCAATGGTTGCTTGGGTTTGGTA 2071
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2072 TGCATGTGTGTTAGAGGGCAGGGTGGCTGGTGAGAGGAATACATAGGTGAAGCACAAGTGATTTTTATGGCACT 2145
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2146 GCAACTGTTCTGCATGATACCATAATAATAATAAATGACATTTTTCATTTGTCAAAACACATAGAATGTACAAG 2219
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2220 AGAAAGAGTAGAACTTAATGTAAATTATGAACTGTAGTTACTATTGATATGTAAATATTGGTGTTCTAATTGTA 2293
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2294 TCAAATGCACCACACCAGTGAAAGACATTAGTAATAGGAGAAATGTGTACGAGTTTGGGAGGTTATATGGCAAT 2367
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2368 TTCTGTACTATCTGCTCTTGTTTTTATTGTAATTTTAAAATTGTGCTAAAATAAAGTTTATTAGTTTAATTTTC 2441
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2442 AAGAGATTAAGAATGTATGTTTAAATGTAATAATATATATGCAGAGCTTTATGTCTATCCATATACTTCAAGCC 2515
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2516 AAATCTACTTTTGGTGAGTTCGTCTGTTTATAAAACACACAGAAATAGGAAGAAAAATAATTGACAAATATTTA 2589
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2590 CTATGAAATAACTTTATAAGCAGTAAATTGAAAGCACATACATATATTTTAAAAAGGCATTTATATACTTAAGC 2663
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2664 AAATTATTTTCCAAATATAGAATATTAGCCAGCCAACAAATAATGTTTAAGAAAGTTTGTAATTTTCTGAGACA 2737
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2738 ATACGGATGATAAAATATTAAGTAAAGAACAACTTTGTTGTAATGTGATATATAACATGACATAAATAAAAAGA 2811
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2812 AAAAATCTAGATTAATGTGTAGTCAATAAGAATTGCCATGAAACATTGTCAAACTGATATTTGAAATTTATTGT 2885
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2886 TTTAAAGCCCCTTATAACTAATATTCTGTTTTTCCATATAATCCTATTAATGTATAAATAAAATCTTCTATTTA 2959
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2960 CCAATTGGATATTAAATCAAAATAATGTAAATTAACATCTACAAATCATAACTTTTCTTAATGTTTATTCTTTG 3033
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3034 AGAATACATAGTAGTTGCACATATTTAAGGCATACATGTGATATTTTGATATGTGTGTATCACGTGTAATGATC 3107
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3108 AAATCAGAGTAATTGGGATATCCATCACCTGAAACATTTATCATAGCTTTAAAGGGCCAAAGCCAGGATTTAAC 3181
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3182 TCTCTTAGATTCCAAAGTCCACGTTCTTAGAAATATTAATTAAAATAATGACAATGTTTGCCTCTGGGTTATGC 3255
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3256 TATTATGAGAAATTTAATATTTTTAAAGCAGAAATTGAAATTTTTGTAATAGGAAGATATTTAATAAATATGGA 3329
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3330 AATGTATAACTGATTTTTTCTCCTATGTCATTATTGTTGAAAGAAAATCTTCATATCTTACGTAAATATATTCT 3403
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3404 AGATCATCTGACAGATTTTATAATTTCTCATTATAAATTAAGATTTTTTTTTATTATCTTCGGTGGTGAAAAAT 3477
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3478 ACGCTCGCCAAACTGACAGGAAAATGTAATGTAATGCTAATTGCTTAATTGATTATTACTAGGAGTCCACAATT 3551
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3552 TTCAGTGCTTTTCTTTCTATTTCTGTGTATTTTATAAAGAGACAAATTCACCAAAAATCAGTTTGGCTTGAAGT 3625
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3626 ATATGGACACACATAAAGCTCTGCACATGTATTATTACATTTAAACATACATTCTTAATCTGTTGGAAATTAAA 3699
Query 199 --------------------------------- 198
Sbjct 3700 CTAATAAACTTTATTTGAGCACAATTTTAAATA 3732
