Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_130944.1
Aligned Length:
3632
Identities:
173
Gaps:
3434

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCCTTGCGCTTGTAAATCGTACGGGGCTGGGACATGGGAGCTGGGCCTGGAGCTTGCCTGGCGGGCGGATGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGTGGGTGGAGGCACGTTGGGGATCCTGGTGCAGAGTGGGCCAGCTGTGGCCTCGGGGCTCGCCACCGTGGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACTCCGCCTGGGCCTAGGCCCCCATCTCTAGGAAATGGCTCCTTCCTGCGTGCGCGCGTTGTGAGATTACTAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TAAGAGCCGCGCTTGTGAAGACGCAGTGCCCAGTTAGTTTGCGCCAGCCTCTGAGTTCAGCTCAGAACACAGAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GATCTCATTGATTCCTCACGTCAACCTTGGGAAATCTGGGTACCCTGGGACGTCCACACATGAGGACCGAGGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGGACATCAAGGGACTGGCCTGGTCCCAGAAACAGGGAGTAAAATGGGAAGTAAACTCAGTCCCACGTCTGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTGACTCCAGAGTTTGGGCCACTGAACCATGCGGCTGCCATCTTGGAGTTCTTTGAGCTGTGAAGTGCTGTGCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCGTGTGATTCTGTGTCCCTTTTGTGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAAAAAGAATGAAATTCTTCATC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAAATTACCTCTCAGACTTTCTGTAAAGGAAAACAAGGGCTTATTCCCAGAAAGAGATTTCAAAGTGCGCCAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGAGGATTTTCAGACAGGTCTATCTTTGATCTAAAGCATGTGCCACATACCAGATTGCTGGTTACCAGTGGCCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTCATTAAAGCTGTCAGCACCATTGCTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGATGTCAGTGACAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACACCTTTGCCTTCTGCTGTGCTTCAGGCCGGCTGGGGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTGGGTCTGGTGGAGAGAGATGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGTGCTGAAGTTGGGAGCTGGGGCCAGGGCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTTTTGATGGTACAGTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CAGGTCTATGATGCCACATCTTGGGATGGAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CACTCACAGAGGTCACATCTTCCTAGATGGAAATGGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATCCCTGCAGACCAAGGACTTTGTTATCAGCAACAAATGATGCCTCTCTGCATGTGTGGGACTGGGTGGACCTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGTGCCCCCCGCTGACACCAGCATCTTTCCATCTAGGCCTCTAGAAAGGGGAGGAGCTGCTGTAGTAGCAAGGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGCTCATGTAGGACTCAAGTGACTACCAGTCCCTGTTACCAGCTGTGTGGCCTTGGGCAAGTCTGCCAGCGTCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTTAGCCTCAGTTTCCTTATCTGTAAAATGAGGATAGTAAGAACTACCTCGTAGTGATATTGCGAAGGTTAGAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GAAACGCATGGCATAATTACTTGGTAGCTATTGTTAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTCACACTATCATAGGGAGAATCAAAAGAGCTAACAAATATAAACATGCTTTGTGAATTTTTTTAAAGAAAAAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATGTAGAGGGGCCAATAAACATGAAAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCTCCTCTTGAGTGGGTCTCATGGGAACACAGGTGCACTTTCCCACACTTGTCCCCCCAGGTGACTAGGTTCAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GAGACATTTGCTTTTGGTGGCCCCACAAACATTTCCTTTTGAGGGCCCATAGTGAATATTAAAGTGTGCTGGAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATGGTGGCTCATGCCTGTAATCCCAGCACTTTCAGAGGCTGAGGTGGGCAGATTGCTTGAGCTGAGGAGTTTGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GACCAGCCTGGGCAACATAGCAAGATCCCTTCCCTTAAAAAAAAAAAAAAATTTGGCTGGGCATGGTGGCTCAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GCCTGTAATCCCAGCAATGTAGGCAGCCAAGACAGGTGGATCACTTGAGTCCAGGAGTTCGAGACTAGCCTGAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAACATGGCGAAACCTTGTCTCTACTAAAAATACAAGTTAGCTGGTTGTGGTGGTATGAGCCTGCAGTCCCAGC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TATTCAAGAGGCTGAGGTGGGAGGGTTGCCTGAGCCTGGCAGTTGAAGTTTGCAGTGAGCTGTGATCATGCCAC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGTATTCCAGCCTGGGCAACAGAATGAGACCCTGTTACACACACACACACAAAATAGATAAGTTGTTCACTCTG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCAGCATCTATTAGCCCTTCCCATGTGCAACACTAATTACATGCTAGAAATACATAAATGAGAGGCTTCCTAAG  2738

Query    1  --------------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAG  36
                                                  |||||||||..||||||||||||||||.||||||||
Sbjct 2739  GTGGTTGAATTTTTTTTTTTTTTTTTTTTGTAGTAGAGATGGAGTCTTGCTCTGTCACCCAGGCTTGAGTGCAG  2812

Query   37  TGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAG  110
            |||||||||||.||||||||||||||||..||||.||||||||||||||.||||..|||||||||.||||||||
Sbjct 2813  TGGCGTGATCTCGGCTCACTGCAACCTCCACCTCATGGGTTCAAGCAATGCTCCTGCCTCAGCCTGCCAAGTAG  2886

Query  111  CTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTT  184
            ||||||||||||.|..||.|||||||.||..|||||||||||.||||||.||..|||.||||||||||||||||
Sbjct 2887  CTGGGATTACAGGCACGTACCACCATGCCCAGGTAATTTTTGTATTTTTGGTACAGACGGAGTTTCACCATGTT  2960

Query  185  GGCCAGGTTGGTCT------------------------------------------------------------  198
            ||||||..||||||                                                            
Sbjct 2961  GGCCAGAATGGTCTTGATCTCTTGACCTTGTGATCTACCCACCTCGGCCTCCCGAAGAGCTGGGATTACAGGTG  3034

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3035  TGAGCCACCGCGCCCGGCCAGGGGATTTCTCCTGTGTGAATTCGCTGGTTAAGTGATAATTAACTGCAGTTAAA  3108

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3109  ATTCAGGTCAAGCATGTGGCTCATGTCTGTAATCCCAGTACTTTGGGAGGCTGAGGTGGGAGGATAGCTTGAGT  3182

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3183  CCAGGAGGAGTTCGAGATCAGCCTGGGCACCATGGTGAACCCCTGTCTCTAAAAAAAAAGAAAGATTTTTATTT  3256

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3257  AAAAAACCTAAACAAATTCAGATAGGAATTTAAAGATAGACCAGGCACAGTGGCTCACGCCTGTAATCCCAGCA  3330

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3331  CTTTGTGGGGGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAAC  3404

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3405  CCCGTCTCTACTAAAAATATAAAAATTAGAGACGGGCATGGTGGTGGCACACCTGTAATCCCCACTACTCAGGA  3478

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3479  GGGTGAGGCAGGAGAATTGCTTGAACCTGAGAGGTAGAGGCTGCAGTGAACCGAGATTGTGCCACTGCATTCCA  3552

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3553  GCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAATAAAATAAAGATAAAATCATAAACACTCAAAAAAAAA  3626

Query  199  ------  198
                  
Sbjct 3627  AAAAAA  3632

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