Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_130944.1
- Aligned Length:
- 3632
- Identities:
- 173
- Gaps:
- 3434
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCCTTGCGCTTGTAAATCGTACGGGGCTGGGACATGGGAGCTGGGCCTGGAGCTTGCCTGGCGGGCGGATGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGTGGGTGGAGGCACGTTGGGGATCCTGGTGCAGAGTGGGCCAGCTGTGGCCTCGGGGCTCGCCACCGTGGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTCCGCCTGGGCCTAGGCCCCCATCTCTAGGAAATGGCTCCTTCCTGCGTGCGCGCGTTGTGAGATTACTAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAAGAGCCGCGCTTGTGAAGACGCAGTGCCCAGTTAGTTTGCGCCAGCCTCTGAGTTCAGCTCAGAACACAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATCTCATTGATTCCTCACGTCAACCTTGGGAAATCTGGGTACCCTGGGACGTCCACACATGAGGACCGAGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGGACATCAAGGGACTGGCCTGGTCCCAGAAACAGGGAGTAAAATGGGAAGTAAACTCAGTCCCACGTCTGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGACTCCAGAGTTTGGGCCACTGAACCATGCGGCTGCCATCTTGGAGTTCTTTGAGCTGTGAAGTGCTGTGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCGTGTGATTCTGTGTCCCTTTTGTGCAGGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCACTCGAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAAAAAGAATGAAATTCTTCATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAAATTACCTCTCAGACTTTCTGTAAAGGAAAACAAGGGCTTATTCCCAGAAAGAGATTTCAAAGTGCGCCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGGATTTTCAGACAGGTCTATCTTTGATCTAAAGCATGTGCCACATACCAGATTGCTGGTTACCAGTGGCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTCATTAAAGCTGTCAGCACCATTGCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGATGTCAGTGACAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACACCTTTGCCTTCTGCTGTGCTTCAGGCCGGCTGGGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTGGGTCTGGTGGAGAGAGATGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGCTGAAGTTGGGAGCTGGGGCCAGGGCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTTTTGATGGTACAGTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGTCTATGATGCCACATCTTGGGATGGAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACTCACAGAGGTCACATCTTCCTAGATGGAAATGGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATCCCTGCAGACCAAGGACTTTGTTATCAGCAACAAATGATGCCTCTCTGCATGTGTGGGACTGGGTGGACCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTGCCCCCCGCTGACACCAGCATCTTTCCATCTAGGCCTCTAGAAAGGGGAGGAGCTGCTGTAGTAGCAAGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCTCATGTAGGACTCAAGTGACTACCAGTCCCTGTTACCAGCTGTGTGGCCTTGGGCAAGTCTGCCAGCGTCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTAGCCTCAGTTTCCTTATCTGTAAAATGAGGATAGTAAGAACTACCTCGTAGTGATATTGCGAAGGTTAGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAAACGCATGGCATAATTACTTGGTAGCTATTGTTAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCACACTATCATAGGGAGAATCAAAAGAGCTAACAAATATAAACATGCTTTGTGAATTTTTTTAAAGAAAAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGTAGAGGGGCCAATAAACATGAAAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCTCCTCTTGAGTGGGTCTCATGGGAACACAGGTGCACTTTCCCACACTTGTCCCCCCAGGTGACTAGGTTCAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGACATTTGCTTTTGGTGGCCCCACAAACATTTCCTTTTGAGGGCCCATAGTGAATATTAAAGTGTGCTGGAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGGTGGCTCATGCCTGTAATCCCAGCACTTTCAGAGGCTGAGGTGGGCAGATTGCTTGAGCTGAGGAGTTTGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GACCAGCCTGGGCAACATAGCAAGATCCCTTCCCTTAAAAAAAAAAAAAAATTTGGCTGGGCATGGTGGCTCAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCCTGTAATCCCAGCAATGTAGGCAGCCAAGACAGGTGGATCACTTGAGTCCAGGAGTTCGAGACTAGCCTGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAACATGGCGAAACCTTGTCTCTACTAAAAATACAAGTTAGCTGGTTGTGGTGGTATGAGCCTGCAGTCCCAGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TATTCAAGAGGCTGAGGTGGGAGGGTTGCCTGAGCCTGGCAGTTGAAGTTTGCAGTGAGCTGTGATCATGCCAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGTATTCCAGCCTGGGCAACAGAATGAGACCCTGTTACACACACACACACAAAATAGATAAGTTGTTCACTCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCAGCATCTATTAGCCCTTCCCATGTGCAACACTAATTACATGCTAGAAATACATAAATGAGAGGCTTCCTAAG 2738
Query 1 --------------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAG 36
|||||||||..||||||||||||||||.||||||||
Sbjct 2739 GTGGTTGAATTTTTTTTTTTTTTTTTTTTGTAGTAGAGATGGAGTCTTGCTCTGTCACCCAGGCTTGAGTGCAG 2812
Query 37 TGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAG 110
|||||||||||.||||||||||||||||..||||.||||||||||||||.||||..|||||||||.||||||||
Sbjct 2813 TGGCGTGATCTCGGCTCACTGCAACCTCCACCTCATGGGTTCAAGCAATGCTCCTGCCTCAGCCTGCCAAGTAG 2886
Query 111 CTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTT 184
||||||||||||.|..||.|||||||.||..|||||||||||.||||||.||..|||.||||||||||||||||
Sbjct 2887 CTGGGATTACAGGCACGTACCACCATGCCCAGGTAATTTTTGTATTTTTGGTACAGACGGAGTTTCACCATGTT 2960
Query 185 GGCCAGGTTGGTCT------------------------------------------------------------ 198
||||||..||||||
Sbjct 2961 GGCCAGAATGGTCTTGATCTCTTGACCTTGTGATCTACCCACCTCGGCCTCCCGAAGAGCTGGGATTACAGGTG 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 TGAGCCACCGCGCCCGGCCAGGGGATTTCTCCTGTGTGAATTCGCTGGTTAAGTGATAATTAACTGCAGTTAAA 3108
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3109 ATTCAGGTCAAGCATGTGGCTCATGTCTGTAATCCCAGTACTTTGGGAGGCTGAGGTGGGAGGATAGCTTGAGT 3182
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3183 CCAGGAGGAGTTCGAGATCAGCCTGGGCACCATGGTGAACCCCTGTCTCTAAAAAAAAAGAAAGATTTTTATTT 3256
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3257 AAAAAACCTAAACAAATTCAGATAGGAATTTAAAGATAGACCAGGCACAGTGGCTCACGCCTGTAATCCCAGCA 3330
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3331 CTTTGTGGGGGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAAC 3404
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3405 CCCGTCTCTACTAAAAATATAAAAATTAGAGACGGGCATGGTGGTGGCACACCTGTAATCCCCACTACTCAGGA 3478
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3479 GGGTGAGGCAGGAGAATTGCTTGAACCTGAGAGGTAGAGGCTGCAGTGAACCGAGATTGTGCCACTGCATTCCA 3552
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3553 GCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAATAAAATAAAGATAAAATCATAAACACTCAAAAAAAAA 3626
Query 199 ------ 198
Sbjct 3627 AAAAAA 3632
