Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_130947.1
- Aligned Length:
- 3106
- Identities:
- 173
- Gaps:
- 2908
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTCGCGAGAGCCGCGCGGCCCCCGAAGGCTCGCAGGCGGAAGTGAGACGCCGGAAGCGGTCGTTGCCATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGGGGACGACTGGCTGGTGGAATCCTTGCGCTTGTACCAGGATTTCTATGCATTCGACCTGTCAGGAGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAAAAAGAATGAAATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTCATCTGAAATTACCTCTCAGACTTTCTGTAAAGGAAAACAAGATTGCTGGTTACCAGTGGCCTTCCAGGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTCATTAAAGCTGTCAGCACCATTGCTGTGCATGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCAGATGTCAGTGACAGTGAGGAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGTAGCCTGCAGGTCCTAGATGCAGACACCTTTGCCTTCTGCTGTGCTTCAGGCCGGCTGGGGCTTGTTGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTGGGTCTGGTGGAGAGAGATGGTGTGCTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTTGGGAGCTGGGGCCAGGGCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTGTCTTCTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTTTTGATGGTACAGTCCAGGTCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGATGCCACATCTTGGGATGGAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTTCACTCACA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGGTCACATCTTCCTAGATGGAAATGGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGCATCCCTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACCAAGGACTTTGTTATCAGCAACAAATGATGCCTCTCTGCATGTGTGGGACTGGGTGGACCTTTGTGCCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCGCTGACACCAGCATCTTTCCATCTAGGCCTCTAGAAAGGGGAGGAGCTGCTGTAGTAGCAAGGGTGCTCATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAGGACTCAAGTGACTACCAGTCCCTGTTACCAGCTGTGTGGCCTTGGGCAAGTCTGCCAGCGTCACTTAGCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGTTTCCTTATCTGTAAAATGAGGATAGTAAGAACTACCTCGTAGTGATATTGCGAAGGTTAGAAGAAACGCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGCATAATTACTTGGTAGCTATTGTTAGATCTGGGAGTGTGAAATGGTAGCGTTTTGTCCCTGTCTTCACACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATCATAGGGAGAATCAAAAGAGCTAACAAATATAAACATGCTTTGTGAATTTTTTTAAAGAAAAAAATGTAGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGCCAATAAACATGAAAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGCAAAACAGGATTTCTGCTCCTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGAGTGGGTCTCATGGGAACACAGGTGCACTTTCCCACACTTGTCCCCCCAGGTGACTAGGTTCAAGAGACATT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCTTTTGGTGGCCCCACAAACATTTCCTTTTGAGGGCCCATAGTGAATATTAAAGTGTGCTGGACATGGTGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCATGCCTGTAATCCCAGCACTTTCAGAGGCTGAGGTGGGCAGATTGCTTGAGCTGAGGAGTTTGAGACCAGCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGGGCAACATAGCAAGATCCCTTCCCTTAAAAAAAAAAAAAAATTTGGCTGGGCATGGTGGCTCATGCCTGTAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCCAGCAATGTAGGCAGCCAAGACAGGTGGATCACTTGAGTCCAGGAGTTCGAGACTAGCCTGAGCAACATGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGAAACCTTGTCTCTACTAAAAATACAAGTTAGCTGGTTGTGGTGGTATGAGCCTGCAGTCCCAGCTATTCAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGGCTGAGGTGGGAGGGTTGCCTGAGCCTGGCAGTTGAAGTTTGCAGTGAGCTGTGATCATGCCACTGTATTCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCCTGGGCAACAGAATGAGACCCTGTTACACACACACACACAAAATAGATAAGTTGTTCACTCTGTCAGCATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATTAGCCCTTCCCATGTGCAACACTAATTACATGCTAGAAATACATAAATGAGAGGCTTCCTAAGGTGGTTGA 2220
Query 1 ------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGA 44
|||||||||..||||||||||||||||.||||||||||||||||
Sbjct 2221 ATTTTTTTTTTTTTTTTTTTTGTAGTAGAGATGGAGTCTTGCTCTGTCACCCAGGCTTGAGTGCAGTGGCGTGA 2294
Query 45 TCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATT 118
|||.||||||||||||||||..||||.||||||||||||||.||||..|||||||||.||||||||||||||||
Sbjct 2295 TCTCGGCTCACTGCAACCTCCACCTCATGGGTTCAAGCAATGCTCCTGCCTCAGCCTGCCAAGTAGCTGGGATT 2368
Query 119 ACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGT 192
||||.|..||.|||||||.||..|||||||||||.||||||.||..|||.||||||||||||||||||||||..
Sbjct 2369 ACAGGCACGTACCACCATGCCCAGGTAATTTTTGTATTTTTGGTACAGACGGAGTTTCACCATGTTGGCCAGAA 2442
Query 193 TGGTCT-------------------------------------------------------------------- 198
||||||
Sbjct 2443 TGGTCTTGATCTCTTGACCTTGTGATCTACCCACCTCGGCCTCCCGAAGAGCTGGGATTACAGGTGTGAGCCAC 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 CGCGCCCGGCCAGGGGATTTCTCCTGTGTGAATTCGCTGGTTAAGTGATAATTAACTGCAGTTAAAATTCAGGT 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 CAAGCATGTGGCTCATGTCTGTAATCCCAGTACTTTGGGAGGCTGAGGTGGGAGGATAGCTTGAGTCCAGGAGG 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 AGTTCGAGATCAGCCTGGGCACCATGGTGAACCCCTGTCTCTAAAAAAAAAGAAAGATTTTTATTTAAAAAACC 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 TAAACAAATTCAGATAGGAATTTAAAGATAGACCAGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGTGG 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 GGGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTC 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 TACTAAAAATATAAAAATTAGAGACGGGCATGGTGGTGGCACACCTGTAATCCCCACTACTCAGGAGGGTGAGG 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 CAGGAGAATTGCTTGAACCTGAGAGGTAGAGGCTGCAGTGAACCGAGATTGTGCCACTGCATTCCAGCCTGGGT 3034
Query 199 ------------------------------------------------------------------------ 198
Sbjct 3035 GACAGGGTGAGACTCCATCTCAAAAAAAATAAAATAAAGATAAAATCATAAACACTCAAAAAAAAAAAAAAA 3106
