Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_134268.1
- Aligned Length:
- 2605
- Identities:
- 171
- Gaps:
- 2415
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTACTTCGACAAAGGTTGAAGTATGTAGCAGGCGAGCGTCAGGGACAAGTGCAGCTATCTCTTTGATCACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGCTTTAAACATTTTTCAGCTTTAAGCTTGTCTTACAAGTCAGCTCTATCAGTCTATTAATTGTTTCACTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTAATATCTTACACGAAGGCACCTTGAAAAACAGCAGGAGAAAGCACATTTGTTTAAGTCCTGCGATGGCTAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACGGCAGCTAATCTCCTTGCAAATTATAATCATAGTTGTAGTTCATCCATTAGGCTGGAAAAGACAAGATTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGTGGCCTTGGTGCCTTTTCCAGTTCCCGGGAGACCCACCAACCCTCGGCGTGTGTTGCCTGCGCACCCGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGTTCTTGCTAATCAGTGAGGAGCTCAACATAACAGGGAAAAGGAGCACAGGATGCAGCTACTTAGAGGGTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGATTGAAAACTTCGATCTCCCCACCCCATCACGGTTGATTTGACGGATTTCTCACCTCGTTCACAGAGAAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCAATTAAGGCACATGGAGACGGACCTCTACCTGCAATGCCCCCCTTGCACTTGGACAGAACCATGTGACTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTATAAGCTATGACACATGAGCAGACATGACATGACGGGATTGATGGAGCAATGACCTCATCTTTTCTCCTGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATATTATGAAAGAGGACTCAAGTCACTCACCTGAGGGACACTGGGTGAAAGTCAGTAATGAAGCTGAAAGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTAAATGCTGGCAAGTGAGATGGATTATAGTGTCTAGACTTTTTCCTGAGGTCATTCTATATCCAGCAGATA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCTTTCAGTATATAGTCTATTCAGAACAATGTGCTAGTGACTATTGAGTGTGGTTACATTCTTTTTTTTTTTTT 888
Query 1 --------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTG 66
||||||||||||||||||.||.||||||||||||||||||...|||||||||||||||||||||||
Sbjct 889 TTTTTGAGATGGAGTCTCACTCTGTCCCCTAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTG 962
Query 67 CCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAG--ACGTGTGCCACCAT-A 137
||||||||||||||||||||||||....|||||||||..||||||||.||.||||| || ||||||| |
Sbjct 963 CCTCCTGGGTTCAAGCAATTCTCCTGAGTCAGCCTCCTGAGTAGCTGAGACTACAGGCAC-----CCACCATCA 1031
Query 138 CCTGGG-----TAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------- 198
| || |||||||||.|||||||||.||||.||.||||||||||.|||||||||.||||||
Sbjct 1032 C---GGCCAACTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGCCAGGCTGGTCTTAAACTCC 1102
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1103 TGACCTTGTAATCTGCCCACCTTGGCTTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCAAGCCCAGCCAGT 1176
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1177 TACATTCTTTAAACAAGGAGTGGACGTACCCTGAAACAAGAGATTAGTCAAAGAGATTTTGCTATTCATGGGAC 1250
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1251 CTAAAAGGTGGCTGTACTTCCCTTTACTGCTTTTCCATACACAGCAATGCACGCTGTATGGGTTCTTATAGGTC 1324
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1325 AGAGAGTGAAAGAGAACCAGGACCTATAAAAGAATACAAGTCTCTAAAATCAGAAAGTTTATTATTTAAAAAAA 1398
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1399 TAGTTACGTGCCAGTCTGCTTATAATTTATTTTTATGACTGAGAGTGCCTTTCATAAGCACATTCTGGCAAACT 1472
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1473 ATAAAACAAATAAATTGAAATTGAATAAAACCTTTAGACATTAGAAGTGTAGCACCAGATTTAGTACATAACTG 1546
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1547 CAAAACTTAAACATGCAATTTTACATCTGCAAGCACATTAAATTGAAAGAAACTTTAACTTAATTTAGATACAT 1620
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1621 TAATTGATACAAACTTTTCTGGTATATAGCACTTCTTGGCGCATTGAGTATTCTTAATCTTTAAGGCACATGAA 1694
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1695 TATAATACCTTAGGAAAGATCTGTTCTCCACACATTTCCTCTATAAAGTGCCAAAAAAAAAAATAACGAAGAGC 1768
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1769 CAGTTTGTCTTCCGCATCAGTGTGATTTAGCATACATAAATAAGTATCTTTTCACACAAAATAAAAGGTTCAGA 1842
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1843 ACCCAAAGTGTCTGATTTTTATAGTGCTTTTTCTTTCCTTTTAAAAAGATAGCAAGATGAGGGTAAGAGGTAAT 1916
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1917 TTAAGAGAAGTAATCATCTTCTAACAGCCAGCTTGCAGAAACTAAAACAAATATCAATGATGTAAAAATGTTGT 1990
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1991 TTTGACACTTTGGTAAATGAAAGTGTGAGATGAGTAAGAATATATTATAGGTGCTTGTATATCAAAGGCCTGTG 2064
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2065 AAAATGGCTGATTATAAAGGAGAAAGTTAATGATCTCTAATTGTGTTGTAATGTAAATGCAGTATCACCGTAAT 2138
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2139 GAAGAGAACAGATTTGCATGTTAACAAAAGAAATATTAGAGGAGTGAGTGTAGGATGTTTGGGATAATTAATTC 2212
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2213 CATCCTCCACTCCTACATACATATGCATATACAAACTCAATTCAATTTTAAAGAGAACCCGAAGAACCAAAAAT 2286
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2287 AGACTGAACACACTTGATGTTGTATGGGAGCTTAAATTACTATTTTTGTTGTTCTCTGTGACTATCTCATTTAG 2360
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2361 TTTCTATTGTGTTTGCAGTTTCTTCCAAGGTGATTTTTAATGGATTGAGTAATGCATAAAAATTTGCAGAAGTA 2434
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2435 TGCAGAAAGTTTGTATGCAGGGCCATGTAGAGCTTTTATCCTACAGTAAATCCTAGTAGTTTGCTGGTGCTGTG 2508
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2509 TGATTTTTTTTGTTTGTTTAGGGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGCT 2582
Query 199 --------------- 198
Sbjct 2583 TATTTATTCCATTTC 2597
