Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_135557.1
- Aligned Length:
- 2788
- Identities:
- 174
- Gaps:
- 2590
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCGTTGGTACGTGCTTTGGTGCAGGGCCTCTTCTCGAGCGCTGATTTCCAGGGTGCTGTTCCAGATGCCATAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAAAATAAATGAGCAGACCTGTGGGGCGAGGGGAAAGGTACAGATAAGTAAACTGAGGCCCAAAGAAGTTAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAAATTTCCCAAAGTCACAAGACAAAGGAGGGGCAGAGCTGTGATTTGAAGTTGGTGCTGTTTGACTCCAAAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTTCAGTTGTCAGGATGTTTACACGGAAGAAGCACTGGACCAGTTATGCTGGGCTCCTGTTTCTACTCCATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGTAGATTCAGCATCCTTGTTTCTAAAATAAAAGTATTACACCAAAGACTCTCTTACGGATCTCCTAACTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACCCTCTAGGATTCCATCTGTTATATTGAACTTTGTAGTATTTTTTGCTGCAAAATCTGTTGAGCACAGCTTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTTTTCTTTTACATCAGTTACAATATTGTTCAGTATTATGGAGATGCTGTCAGGGATAGTGAAGCTGTTTGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTACATTAAATGGCCCAGTCTGTTATTTATTTTGAGTTCCTATGTCAGCCCTCCTCCCCTTGCTTTGTAAATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGCTTTCCATCTCCTTCCTTGATGTCAGACTGTCAGTTTTTACTTCTTGTTGCTGTCCCAGTGCTTACCTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAGTCAGACTGCCTCTTTTCTAAATTGCTGCTTCCAACACCTGATATTTAAATTGTTAGAGTGAGTCTAAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAGAGGAAATGGTCTTTGAAGAAGGCCTGAAGAACTCTTCCATGGGGAAAGTATAGAGTGTGCACGCATTAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TACAAGAACCTGATGATATTTTCTTGGATGCCGTGTGTTTTCAGGGTTCTCGGGAGTTGAGTTTGCACATACGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTAGGTTGCTCTTTCAGTGATGTGTGAGGAAGGAAGTGAAGATGCAACTCACTTCCCTGCTTTGGTATTGGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCACAGCATTATCCAATTACTCCTATATTCTATGAGCTTATTCTCATCACCCAACTTTACCACCTGATATTGTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAAGATTTATAAGTAAAATCTTTTCCAAATGATGCTTTTGAAGCAGGCATCGATTTGATTGCAAATTTAATTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAGCCAATATTTATGGAATTTGTGCAATCAAACATTCTCTCCATAACATTCGATCTGACAAATTAAATTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATACCCCCATTTTGCCACCAGAATACACTTGCCAAGGGTAATTAGCAAATGGCCAAGTCTTCATTAGGTCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGAATGGACCAGTCCATTGCTGTCTGAATCAGAGAAAGAGGCCCTGGCTGTGCATGGTATAAGGAGCATTTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATCTTAGTCATTTCCCAAGGTCCTGCTGGGGTCCTAATGACTGTAGTTTGGGGAGAACACTGGGAAAATCAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGCACTAACCATACAAGACAATTTCTGCTTCACGAAATCGTTGTTTTGGACACACTGTAAAAGATCTTATAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TATTTTAAAATCTTTCTGATTTGTTTGTATGGAGAAATTCAGACTTAGAGTGGGTACTAGAGAGCATCTAGCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCATTGAAGCTCACTGGTGATAATTGAATGTTTACAGCCTCAAATATCCTGAGAAAAATGTTCTCATTCAACT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTTTAAAATATCTGGTATGTAAGAGGAACACATTTAAGAGTATCTTTCTAATTTCAATAAGAAATTAAAAGCA 1702
Query 1 --------------------------------------------------ATGGAGTCTCACTCTGTCACCCAG 24
|||||||.||||||||||.|||||
Sbjct 1703 TGGAAATGGAATTTTATTTTATTTTTTTAATTTTTTTTAAATTTTTTTAGATGGAGTTTCACTCTGTCGCCCAG 1776
Query 25 GCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAG 98
|||||||||||||||.||||||||||||||.|||||||||..||||||||||||||||.|||||||..||||||
Sbjct 1777 GCTGGAGTGCAGTGGTGTGATCTTGGCTCAATGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCCTGCCTCAG 1850
Query 99 CCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAG 172
||||||||||||||.|||.|||||.|.||..||||.||.|||||.|||||||||.|||||||||.||||.||.|
Sbjct 1851 CCTCCCAAGTAGCTAGGACTACAGGCATGCACCACTATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGG 1924
Query 173 TTTCACCATGTTGGCCAGGTTGGTCT------------------------------------------------ 198
||||.||||||||||||||.||||||
Sbjct 1925 TTTCTCCATGTTGGCCAGGCTGGTCTCGAAGTCCTGACCTCAAGTGATCCTCCTGCTTCAGCCTTCCAAAGTAC 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 TGGGATTACAGCGTGAGCCACTGCGCCCGGCGAAACCTTGGTTTTTATCCTAGATTATCTAGGGTCCTAGATTA 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 CTGAGTGTTGAGGGGCAAGTTACCCTCTTATGGATGAAATGAGACGGCCAATTAGATACAGTTTAGGGTCCCTT 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 CTGATGCATCATTCTTTGGTTTTACAGCTAAAGTCAACTCTTAATCATCTAGTTAGTGAGGGAAGCCCTGTAGG 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 AAATACTGTATGAACCAATGGTTCTCAGTGAAGGTGGTACTGACTCCTAGGGGAATTTTGGAAATATGTGGGAG 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 TGTCTACGGTTCTCATGATGATTGTGGGCACTTGTGGCATTAAGTGGACAGGGACCTGGGCTGTTTATCATTCT 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 GCAATGTGACTGACTCACAGAATGAAGCTCTGTCTTGTATCATATATGACTGCTGATGGCCCCAGTGGACATTC 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 ATTTAAGTACAAACCTGTTTATAATTTTTGAACTTGAATTTATCTCCATTTTACATATACACACAAAGCATTTT 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 TTTTTTTGCATGGCTTTTTAGACATTGAATTTTCCAGGACTGCAACAGCTGGGTAAATTGAGAGACAGTTGTCT 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 CTTGTTTGGTTTGGAATTTACCGACTTGATCATCATTTTGGAAGACCATCATCAACAACAATGTTATTCATGGA 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 CTTTGAGCATCAAATAACTGTCCTATATGAGTCTGCATTTGTGGCAGTTGTACTCACAGTGGTTCTACAAATGA 2738
Query 199 -------------------------------------------------- 198
Sbjct 2739 CTGCAAACAACTGACGACTTCGTTGCGTCTCCTAATGTACGCATGCCCCA 2788
