Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_145451.1
- Aligned Length:
- 4403
- Identities:
- 171
- Gaps:
- 4208
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGAGTAAGCTAGAACTGCTGGGCCGGCCTGTGCAGGTTGTTCTGGCTTTTAATCGTTTCCAGTGATTGAAAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCAGGCTACCATCCCTCCAAATAACTCCAGTGCTAACTCAAACCTCATATTCACCATTCACTTTCCGGCAGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGAACCTACCGGGGCGCAGGACGTAGTTTTCGTCTTTACCAGAGTGCGTGGCCGGGCGCGGTGGCTCACACCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCATCCCAGCATTTTGGGAGGCCCAGGCGGTCGGATCGCCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGGTGAAACCCTGTCTCTACTAAAAGCACAAAAATTAGCCAGGCGTGGTGGTGGGCGCCTGTAACCCCAGCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGGGAGGGTGAGGCAGGGAGAATCGACTGAACCCAGAGGCAGAGGTTGTAGTGAGCCGAGATCATGCCACTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACTCCAGCCTGGGCAACAGAGTGAGGCTCTGTCTCAAAAAACAAAACAACAACAACAAAACAAAAAAAGAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAGGACAAAACAGGTGTATATTCCCATTTTATAGATGACATAACTGAGGCCCAAAGAAGGAAAGTGACTCACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGTGTCACAGTAAATCCACGGCAGGACCAGGGCCAGAACAAAAGTCTCCTGAGTGGCACTCTTCACTATCACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAACACTGTGGCTCGCAACAGCCCTGGAAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACCCTCACTGCTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTGCTGGCAGAGAGCCGCTCCTTCTTGTCAGAGTAAGTAGGAAGGAGGCCTTTGCCTGTGCGGACCTATGGTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACAGTGCCTTGTTACAGAGCACCTGCTGTGCTTAGCATTCCACCCGGGGCCAAGAGGCTGTGTGAGCAGGTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGCCAGCCTGGCCCCGCCTGTCACAAGCTGCTAGGTCTGCACCCTTGCCACCCATGGCAGGGGGTCTGACAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACTCCCCATTTGTGAGGTCTGTTCACTGCCTGTATTTCGAACAGGGCCTGGCTCTGCAAACCTGTGCAAACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTTGATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTTGGCCAGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCTACCCAGCCACCACAGCTTCCTCTCACCTGATTCTCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTTATTTTGCAGAAACAGGCTTTCCCAAGTCTGTCACCAAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGAGGGGTAGAGCTGGGTGTCCAGCCAGATCTAACCTCCAGCCCAGAGCTGGTGATGCGGAAAATCAGGGCAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGCAGCAGGATCTAAAATAGGGAGGGAAGAAGTCCTCAGTTACGTAACAGCGAGGAGACTCTCAGCCTACGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGTAGCAACCATGGGGTCCTGCCACTCGAGCCAGACCCTCCTTCCCTTCCCGTTTTGGGCTCTAAGTGCTGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCTGTGAGAGAATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAGGCCATTCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGCAGAGCTGGATTCTGGAGCTGCCCTCAAAGGGCTTGAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTATATGAGCGCCGTGCTTGAGAAGTTAGTGATGATTTCTGCTCAAAGAGACAGAGCAAGAGGGCTGAGGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCTGGTGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTGCGGGCACTAAGGAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGTGACTTGCGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTGTTGAGCAAGGGACCAGGGCTGGGACAGGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCCAGGACCCCCACAACCCCAGGGGAGGAAAGGGGACTCAGCCATCATCATGCCTGACTCCCAGGCTCCCGGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGAGGAGCCTGCTAGCCAGGGCTTGAAGCCCTCCAGTGACAGGGGGTGCATTACTTCCTAAGAAGCCATTTCCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGGTTCAGAAACGTTTATCCAAAGACTGAGCCGAAATCTACCACCTCACTTAATGTTTTTGGCACCTGGTTATG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCCAGACCTGCACAGAATAATTTAACTCTTCTGAAATAGACTTCCAGATATTTGGAAGTGGCCAAGTCAGGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAAGAGCTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTCGCTGTCTGAACAGGTTTCAGCTGTGGTTATCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AATCCCTCATTCTTGATGACACACACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GACAGGTTTACTAGCTTTGGTGAGATGCTGACACTCCTCACATGCACGTGCCCCTCCCAACTACTCAAGTGAGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCGTGGCAAATCTCTCATCTGATCTGCATAAACGGATTATATCTTAGGCGGTGCCATTGTCTGCATTTTACAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAAGGAAACTGAGCCTCAGGGAGGTGAAGTCATTTGCCCAAAATCACAGAGCCAGGAAACGAGAGAGCCAAGAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAGACCCCGCAAGATCCAGACCCCACAAGATCCAGACCCCGCAAGATCCAGACCCCTCAAGATATAGACCCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAAGATCCAGACCTCACAAGATCCAGACCCCACAAGATCCAGACCTCGGCTATCTGGCTTCTCTTTTTTTTGCG 2738
Query 1 ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGG 74
|..||||||||.|||||||||||||||||||.|||||||.|||||||..||||||||||||||||||||||..|
Sbjct 2739 ACAGAGTCTCAATCTGTCACCCAGGCTGGAGCGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCCTCCCAG 2812
Query 75 GTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAA-- 146
||||||||||||||||..||||||||||||.||||||||||||.|||| ||||| |.||||.|||||.|||
Sbjct 2813 GTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATCACAG--GTGTG-CGCCATGCCTGGCTAAAT 2883
Query 147 -----------TTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT----------- 198
||||||.|||||||||.||||.||.|||||.|.||||||||||.|.||||||
Sbjct 2884 TTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCTATGTTGGCCAAGCTGGTCTCGAACCCCTGA 2957
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2958 CCTCAGGTGATCCACCTGCCTCGACCTCTCAGAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCAGCCCCAT 3031
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3032 CTGACTTCTATACCCGCAGCCCCTTCCTTTACCCTCAGGCTGCCTCAGTCTCCACACTGGGGCCCAGAGCTGGG 3105
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3106 CTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGC 3179
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3180 AAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGCCTGGAAAGGGAGGCCCAGGCTTCCCTG 3253
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3254 TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGTCGATGGAATGCCTGAGGGTG 3327
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3328 GAGAGAGCTGTGGCTGAGGCCTACCCTGGCGGCCTCAGCATCTGTGGAGATGTGTAGAGACAGGGAGAGTGAAT 3401
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3402 GGGGACCAACCTCAGGAGATGCTGGGTCCCAGAAGCACCATGTGCTTCTCCTTTGGTGAGACTTAATTACTCTC 3475
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3476 TAAAATGTAAGGCTACTCCCACTTATCAAATTATAGATGAGTTTAATTACAGCACACTGAGTAACCACACTGGG 3549
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3550 CTCCTTCAGAAATAGCAGCAGGCTGGTTGCTCTTCTCAGCTTCAGCTGTAGCCACCCCAGTTTCAGGAGGAAGT 3623
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3624 GCCCGTGGTTCCTGGGGCCTGGAAGTGCCGCTCAACTCTGCTGCCAGACAAGTGCGGGCGTGGTGGACTGCACT 3697
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3698 GGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGGGGCCATCTGGCCA 3771
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3772 CGTGTTCTGTGACTGGGTCATTTACTCTGCTGCAACCTCTCTTTCTCCTACCTACATCGTGTTCTGGATAAAGG 3845
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3846 TTTTGGCTCATAATGTCCGACCAGAGGTGGACAAAGTGGTGTGGGACCTGCCGTAAGAAACAGGGAGCATGGTG 3919
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3920 CGGGGAGAGAAGCCTGTGCCTTATGGAGACTCGGGGCACCTTCAGGAAGCAGGGTCAACAGCAGCAGGCCGCTA 3993
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3994 GGGAGTCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCT 4067
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4068 CTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCGATGGTCCCAG 4141
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4142 TGCCATATTAGTGTCACATTCTGAGGGGCAGCCCTGTGCCGGACGGCAGCTGCTACCTCTCCCTCTGCCCCTTT 4215
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4216 ATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCCGACAGCAGGCAGCCCACTGCCCTCCCAGA 4289
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4290 GCTCACTGTCTAGCCCAGGGTGACACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTC 4363
Query 199 ------------------------------------- 198
Sbjct 4364 CATCACATGTAAATAAAAATACTCATTTTCAATCTAA 4400
