Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_145451.1
Aligned Length:
4403
Identities:
171
Gaps:
4208

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGAGTAAGCTAGAACTGCTGGGCCGGCCTGTGCAGGTTGTTCTGGCTTTTAATCGTTTCCAGTGATTGAAAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCAGGCTACCATCCCTCCAAATAACTCCAGTGCTAACTCAAACCTCATATTCACCATTCACTTTCCGGCAGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAGAACCTACCGGGGCGCAGGACGTAGTTTTCGTCTTTACCAGAGTGCGTGGCCGGGCGCGGTGGCTCACACCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTCATCCCAGCATTTTGGGAGGCCCAGGCGGTCGGATCGCCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGGTGAAACCCTGTCTCTACTAAAAGCACAAAAATTAGCCAGGCGTGGTGGTGGGCGCCTGTAACCCCAGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCGGGAGGGTGAGGCAGGGAGAATCGACTGAACCCAGAGGCAGAGGTTGTAGTGAGCCGAGATCATGCCACTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CACTCCAGCCTGGGCAACAGAGTGAGGCTCTGTCTCAAAAAACAAAACAACAACAACAAAACAAAAAAAGAGTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAGGACAAAACAGGTGTATATTCCCATTTTATAGATGACATAACTGAGGCCCAAAGAAGGAAAGTGACTCACT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGTGTCACAGTAAATCCACGGCAGGACCAGGGCCAGAACAAAAGTCTCCTGAGTGGCACTCTTCACTATCACA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TAACACTGTGGCTCGCAACAGCCCTGGAAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACCCTCACTGCTTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTGCTGGCAGAGAGCCGCTCCTTCTTGTCAGAGTAAGTAGGAAGGAGGCCTTTGCCTGTGCGGACCTATGGTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GACAGTGCCTTGTTACAGAGCACCTGCTGTGCTTAGCATTCCACCCGGGGCCAAGAGGCTGTGTGAGCAGGTGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAGCCAGCCTGGCCCCGCCTGTCACAAGCTGCTAGGTCTGCACCCTTGCCACCCATGGCAGGGGGTCTGACAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GACTCCCCATTTGTGAGGTCTGTTCACTGCCTGTATTTCGAACAGGGCCTGGCTCTGCAAACCTGTGCAAACTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGTTGATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTTGGCCAGAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCTACCCAGCCACCACAGCTTCCTCTCACCTGATTCTCACA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTTATTTTGCAGAAACAGGCTTTCCCAAGTCTGTCACCAAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGAGGGGTAGAGCTGGGTGTCCAGCCAGATCTAACCTCCAGCCCAGAGCTGGTGATGCGGAAAATCAGGGCAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGCAGCAGGATCTAAAATAGGGAGGGAAGAAGTCCTCAGTTACGTAACAGCGAGGAGACTCTCAGCCTACGCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGTAGCAACCATGGGGTCCTGCCACTCGAGCCAGACCCTCCTTCCCTTCCCGTTTTGGGCTCTAAGTGCTGCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCCTGTGAGAGAATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAGGCCATTCCC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGCAGAGCTGGATTCTGGAGCTGCCCTCAAAGGGCTTGAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTTATATGAGCGCCGTGCTTGAGAAGTTAGTGATGATTTCTGCTCAAAGAGACAGAGCAAGAGGGCTGAGGGGC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCTGGTGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTGCGGGCACTAAGGAAG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGTGACTTGCGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTGTTGAGCAAGGGACCAGGGCTGGGACAGGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGCCAGGACCCCCACAACCCCAGGGGAGGAAAGGGGACTCAGCCATCATCATGCCTGACTCCCAGGCTCCCGGA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGAGGAGCCTGCTAGCCAGGGCTTGAAGCCCTCCAGTGACAGGGGGTGCATTACTTCCTAAGAAGCCATTTCCT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGGTTCAGAAACGTTTATCCAAAGACTGAGCCGAAATCTACCACCTCACTTAATGTTTTTGGCACCTGGTTATG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACCCAGACCTGCACAGAATAATTTAACTCTTCTGAAATAGACTTCCAGATATTTGGAAGTGGCCAAGTCAGGTT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TAAGAGCTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTCGCTGTCTGAACAGGTTTCAGCTGTGGTTATCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AATCCCTCATTCTTGATGACACACACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GACAGGTTTACTAGCTTTGGTGAGATGCTGACACTCCTCACATGCACGTGCCCCTCCCAACTACTCAAGTGAGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TCGTGGCAAATCTCTCATCTGATCTGCATAAACGGATTATATCTTAGGCGGTGCCATTGTCTGCATTTTACAAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TAAGGAAACTGAGCCTCAGGGAGGTGAAGTCATTTGCCCAAAATCACAGAGCCAGGAAACGAGAGAGCCAAGAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCAGACCCCGCAAGATCCAGACCCCACAAGATCCAGACCCCGCAAGATCCAGACCCCTCAAGATATAGACCCTG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CAAGATCCAGACCTCACAAGATCCAGACCCCACAAGATCCAGACCTCGGCTATCTGGCTTCTCTTTTTTTTGCG  2738

Query    1  ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGG  74
            |..||||||||.|||||||||||||||||||.|||||||.|||||||..||||||||||||||||||||||..|
Sbjct 2739  ACAGAGTCTCAATCTGTCACCCAGGCTGGAGCGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCCTCCCAG  2812

Query   75  GTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAA--  146
            ||||||||||||||||..||||||||||||.||||||||||||.||||  ||||| |.||||.|||||.|||  
Sbjct 2813  GTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATCACAG--GTGTG-CGCCATGCCTGGCTAAAT  2883

Query  147  -----------TTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-----------  198
                       ||||||.|||||||||.||||.||.|||||.|.||||||||||.|.||||||           
Sbjct 2884  TTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCTATGTTGGCCAAGCTGGTCTCGAACCCCTGA  2957

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2958  CCTCAGGTGATCCACCTGCCTCGACCTCTCAGAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCAGCCCCAT  3031

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3032  CTGACTTCTATACCCGCAGCCCCTTCCTTTACCCTCAGGCTGCCTCAGTCTCCACACTGGGGCCCAGAGCTGGG  3105

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3106  CTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGC  3179

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3180  AAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGCCTGGAAAGGGAGGCCCAGGCTTCCCTG  3253

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3254  TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGTCGATGGAATGCCTGAGGGTG  3327

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3328  GAGAGAGCTGTGGCTGAGGCCTACCCTGGCGGCCTCAGCATCTGTGGAGATGTGTAGAGACAGGGAGAGTGAAT  3401

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3402  GGGGACCAACCTCAGGAGATGCTGGGTCCCAGAAGCACCATGTGCTTCTCCTTTGGTGAGACTTAATTACTCTC  3475

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3476  TAAAATGTAAGGCTACTCCCACTTATCAAATTATAGATGAGTTTAATTACAGCACACTGAGTAACCACACTGGG  3549

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3550  CTCCTTCAGAAATAGCAGCAGGCTGGTTGCTCTTCTCAGCTTCAGCTGTAGCCACCCCAGTTTCAGGAGGAAGT  3623

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3624  GCCCGTGGTTCCTGGGGCCTGGAAGTGCCGCTCAACTCTGCTGCCAGACAAGTGCGGGCGTGGTGGACTGCACT  3697

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3698  GGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGGGGCCATCTGGCCA  3771

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3772  CGTGTTCTGTGACTGGGTCATTTACTCTGCTGCAACCTCTCTTTCTCCTACCTACATCGTGTTCTGGATAAAGG  3845

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3846  TTTTGGCTCATAATGTCCGACCAGAGGTGGACAAAGTGGTGTGGGACCTGCCGTAAGAAACAGGGAGCATGGTG  3919

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3920  CGGGGAGAGAAGCCTGTGCCTTATGGAGACTCGGGGCACCTTCAGGAAGCAGGGTCAACAGCAGCAGGCCGCTA  3993

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3994  GGGAGTCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCT  4067

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4068  CTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCGATGGTCCCAG  4141

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4142  TGCCATATTAGTGTCACATTCTGAGGGGCAGCCCTGTGCCGGACGGCAGCTGCTACCTCTCCCTCTGCCCCTTT  4215

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4216  ATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCCGACAGCAGGCAGCCCACTGCCCTCCCAGA  4289

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4290  GCTCACTGTCTAGCCCAGGGTGACACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTC  4363

Query  199  -------------------------------------  198
                                                 
Sbjct 4364  CATCACATGTAAATAAAAATACTCATTTTCAATCTAA  4400

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