Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_158193.1
Aligned Length:
2768
Identities:
158
Gaps:
2590

Alignment

Query    1  ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGG  74
                           ||..|||||||||||||||||||||..||||||||||||||||||||||||.|||| .|
Sbjct    1  ---------------GTTGCCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCTGACTCC-CG  58

Query   75  GTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCC--ACCATACCTGGGTAA  146
            ||||||||||||||||.|||||||||||||||||||||||||||||||    |||||  ||||..||..|.|||
Sbjct   59  GTTCAAGCAATTCTCCTACCTCAGCCTCCCAAGTAGCTGGGATTACAG----GTGCCCAACCACGCCCTGCTAA  128

Query  147  -TTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT---------------------  198
             ||||||..||||||||.||||.|..||||||||||||||||||||.||||.|                     
Sbjct  129  TTTTTTGTGTTTTTAGTAGAGACGAGGTTTCACCATGTTGGCCAGGCTGGTTTTGAACTCCTGATCTCAAGTGA  202

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  203  TCCGCCCGCCTTGGCCTCCCAACCTGCTAAGATTACAGGCGTGAGCCACCGCACCTGGCAAAAACTGTGCTTTC  276

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  277  TTATGGTATATTTTTTTCCCTTTCTTCTGAAACATTTTTAGATTGTTATCTCATTTTACTTCATTTTACATCAG  350

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  351  AAGGTTTTCACATAGGAGTCCGTATTCTTAGGTTTTGTATGCTTTGGAGGATTTCACTCTCTATTCATTCCCTG  424

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  425  TGAGGTCCTATATGATGCCTGTTTCCAAGGGAAGAAGTAAAGTCAAGAAACAAGATATCCTCAAGCTACTCTTA  498

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  499  GGATCAGTGTCTGCATAGATCTGGCACACAGAAATGCAAGGAAACAATTTGTGCAAAGCATTAAAAAAAAAAGG  572

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  573  GGGGACCCTGAGAGTATAACAAGTGCTCCTGAGAGAGGACAGACGGAGAGGACGCATGGGCAGGGATGGCCGCC  646

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  647  CTGAGCAGCTGATGTTCGAGCTAAGATCTGAAAGGTGCATGATTTCCCACTTACCTCCCGCAACCACTACCACC  720

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  721  CACGTTGTCCACAGTATTCAGCTGTCTCAGGGAGGATCACAATTATTCTAATGGGACTGCAAAGAGTGAAGGAC  794

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  795  ACAGCTTTTAACATCAGATTCGAATCCTACAATTTGGAACCCATGGGCACTTCTAGATTGGATCTTGCAGAGAT  868

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  869  TTTTTACAACAGAAATAATGGAAAGGCAAAAGAAAACATTGAGTAATAACCAACCCAAGCAAGTCCAGCCTCTT  942

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  943  TCTGCAGAAGATAATCAGGATGACTCCACCTTTGTACCTGACTGAGGAACTTAGTGAACCCTGAAGAAATGATG  1016

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1017  ATTAAAGAGACAATGAAGAGGCCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGA  1090

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1091  TGAGACATTTTCTGGCTGAGAGACAGAGATATCCTAGAAAGGTGTCAAGTTAAAAGAGGGCCGATGAAAGGACT  1164

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1165  TGAGCCACAGCCATCGGAGGAGGGTATGGATGGCTGCAAGCCCACAGGCCACCTGTTGAAGAGAGGAAAAAAAA  1238

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1239  AACAGATTTCAAATGTGCCCGTGGACTTCGAGCTGGTGCGTTCAGTGGCAAAGCTGGAATTCAAATCTCAGGGC  1312

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1313  TCCTGCTCTGGGCTTCTTCTCCATGAAACTTGGAGGAAAAGAAAAAGGAAGACACTCTTACTGGTCAGAGGAGA  1386

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1387  GAACACAATTCCTTCAGTGGAACCAGTAATTCAAGCTACTGCATATGCCAATTAAAGACCAATCTGGGGAAAGG  1460

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1461  TGGATGCCCTGGGCTCCATCTGCCATTCAACCACTGATTACGGCCTTGTACGGATGGACTTTCAGCAGCAGGAA  1534

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1535  CCCAAAATCATTGGTGAAATAGGAAAGCTATTGTACAGATATTAGAAAAATAAGACCTTCACAGTCATCAGAAA  1608

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1609  AGTTATCACTTAATGTCATGTGTCATCAGTCCTTTCTTGTGATTGATTATGTTTGTATACATGCACTTGAAATG  1682

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1683  TGTTTTTAAAAGAGTATTATAAGAGATATTTTTCCAGTAAGTACAATAAGCATTCAATAGTAGAACAAATAGAA  1756

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1757  CATTGATATCTCATTATTAGTATTGCTCACATGTGTATTATGAGGCAGAATTAAAGCTGAAATGCAATAAGAGC  1830

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1831  CATATTTTATCATAATAGATATTTTTCATTTTCTGAAATAATATAATAAAATAATGTGGTTGGTTAAAGTATGT  1904

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1905  ACACACAGGCTATCAATTAAGATGTTTTAAATTTAATTAAATATTAAATAATAAAAGCCACAAGGGGAAGTAAG  1978

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1979  GGAAGTAAGACAATTCTTTCTTTAACATACAACACATTTAAATGTTTTCTGATAATTATAGAAATATCAAAATC  2052

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2053  AGATCAATCTTCATACCTCAGAAAATTAAATGATTAAATACTGGAGACTATTAAAACAAATAAAACTGTTTATT  2126

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2127  CCACAACTTTGCACAGCTAAAAAAAAATCTTCTATCATGTCTAGAAACATGTTTCTGACATATGCACACCTCAC  2200

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2201  CAGCATATCTCAGGTTATTATACACCTCCAACCACAGCCTCACGGTGGCAGGCAGTCAGTAAGATGGACCCCAG  2274

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2275  TGATCCCTGCCTCCTGGTATTCACAGTCTAGGGTAATCTCCTTCCCTTGAGTGTGAGCCTGTGGCTTACTTCTA  2348

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2349  ACCAATAAGAGTACAGCAAAAGCAATGGGATGTCAATTCTGTGAGTATGTAAAATTGTAACTTCCATCTTGCAA  2422

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2423  GCCAACTCTCTTCTTTGCTGGCTTTCATGACGCAATATACCATGTTGGAGGGGCTCGCGTGGCGAAGAACTGAG  2496

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2497  AGGCCTGTAGGAACAAAGTCCAATAGCCAGGTAGGAAGGAGTCCCTCAGTCCCACAACCCAAGGAAACTGAATT  2570

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2571  CTGTCAACTAACACGCATGTAAGTGAGCTTGGAAGTGACTTCTTCCCCAAGTGAGTCTTCAGATGAGGTCCTAG  2644

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2645  CCAACTTTTTGATTGCAGCTTGTGACAGACCCTGAAGCAAAGGACTCAGCTAAGTTGTGTCCTAATTCCTCCAC  2718

Query  199  ------------------------------  198
                                          
Sbjct 2719  TGTGAGAAAATAAATGTGTGTTTTTTAAAA  2748

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