Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_158629.1
Aligned Length:
4729
Identities:
172
Gaps:
4531

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAATGTAGTCACTGTCCCGGAACCTGGGGCAGCGGAGTCCCGTGCGCCCTGTGGTGACAGCTCAGGAGGGTGTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAATACTGCGTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATCGCGGTGCAAGGTGTGCTGTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGGACTCGTGCGCTACCGCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAGCACGGCGGCCAGGAACACGCTCTCTTCCTCTATACGCACCGGAGGATGGCCATTACCGGGGACGATGTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTTACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTACATC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTGTAGAGACGGGGTTTCACCGTGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCCCACCTCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCGGGCCTAAATCAGGCTTTTCTCACAGCTCTAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGGTTATCACTGTTTGCATCTCCATTTTATGGACAAGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGAGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTAGCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGCCTGTCCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGCTTCGATTCTGCGACCCGGGATCCTGAATTCCTGTGGCTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GATGCCAACGCCGCGCGGTTGTAACTCGGCCCTAGTTACCTGGCCAGGGTGGTTCTAACTTTGATGGTTTGAGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCAAGTGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGGACAAGGCTCATATTTTATCCATGCAGAAGTTTGGACTGCGAGATACAATTGTGAAATCACATCTACTACAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAAGAAGAGGATTACACCTATATCCAGAACTTCAGGTTTTTTGCGGGAACATACAATGTAAATGGGCAGTCCCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAAAGAATGCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTAGGGTTCCAGGAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGATCTGAGTAAGGAAGCTTTTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGTCTTCATCCAGATGCCAAATATGCAAAGGTGAAGCTTATCCGACTGGTTGGGATTATGCTGCTGTTATATGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAAACAGGAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAGACTGTGGGGACAGGAATCATGGGGAGGATGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCAACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGAATTCTCACTTGGCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCCCACATTGAAGAGTATGAGAGGAGGAACCAGGACTATAAGGACATTTGTTCTCGAATGCAGTTTTGTCAGCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGACCCAAGCCTTCCCCCTCTCACCATCAGCAACCATGATGTGATCTTGTGGCTGGGGGACCTCAACTACAGGA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TAGAAGAGCTGGATGTGGAAAAAGTGAAAAAGCTCATCGAAGAGAAGGACTTTCAAATGCTGTATGCATATGAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAGCTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAGGCTTCACAGAGGGTGAGCTCACATTCCAGCCTAC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTACAAGTATGATACGGGCTCTGACGACTGGGATACCAGGATACATGTTATCCCTTGGTGGGCCCGAATTGCTC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTGCTGCCTCAGATGACTTAGCCACATGGACATGAAGGCCCTGATTCATCACTCCCCACCTGAGCCAGGGCACT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CGCCAGGCAGCGGGCACTGCTGTTTCTGTGAGTACTTCCAGTGTGGACTTTGCATTTCAGTGAGAAGTGCCGTG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTCCTGCCTGGTGTGATCGGATTCTCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACCAGAGCCACATGGCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGGGTGAGGGTCGTAAATGACGAGCTTTA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCGGAAGACACTGGAGGAAATTGTTCGCTCCCTGGATAAGATGGAAAATGCCAACATTCCTTCTGTGTCCCTGT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACATGCAATTGAAAGTAGAATCCTTTACAATTCATAATGGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CAAGTACCCTGTCATTTTGAATTCATCAACAAGCCTGATGAAGAGTCTTACTGTAAGCAGTGGCTGAATGCCAA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCCCAGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAGATTGACTTGGAGCTCTTCGTAAATAAGATGACAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CTACAAAGCTCAACTCGGGTGAAGACAAAATTGAGGACATTCTGGTTCTGCACTTGGACAGGGGAAAGGATTAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TTTTTGTCTGTGTCTGGGAACTACCTGCCCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTTACATGAGAGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCCAATCTTGGACCTACCACTTGAAACCATTAGTGAGCTGACTCTGATGCCAGTATGGACTGGAGATGATGGGA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTTGATTACCTGTACCGAAATGCTGTC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATACTGG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AATGATTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGCCCTGCTGCTTTTCCTGGAGAGCCTTCCAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGCCTGTCATCTGTTACAGCACCTACCATAACTGCTTGGAGTGTTCTGGCAACTACACAGCAAGCAAACAGGTC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATTTCTACTCTCCCCATATTCCACAAAAATGTCTTCCACTACTTGATGGCGTTTTTGCGAGAACTGCTGAAAAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TTCAGCAAAAAATCATTTGGATGAGAATATTCTAGCTAGCATATTTGGCAGCTTATTGCTTCGAAACCCAGCTG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTCACCAAAAGCTTGATATGACAGAGAAGAAGAAGGCTCAAGAATTTATTCACCAGTTCCTCTGCAACCCACTC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TGAGCCTCTCTCTCCTCCTATTTTACTTGAGGCTGCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCCTAGTACCCCAATTAAGCC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACAT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TCAATTTTCAACTTTAGTTATTTAACACAGATTTTTTTATTTTTTATTTTTTTTTATTTTGAGACGGAGTTTTG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTCTGTCGCGCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTGCAAGCAAT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TATCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCACACACTGCCACGCCCAGCTAATTTTTTGCATTTT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  AGTAGAGACGGGGTTTCACCGTGTTGCCCAGGCTGTTCTAAAACTCCTGAACTCAGGTAATCTGCCTGCCTCGG  3626

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct 3627  CCTCCCCAAGTGCTAGGATTACAGATGTGAGCCACCACGCCCGGCCTTTTTTTTTTTTTTTTCTTTTTTGAGAT  3700

Query    3  GGAGTCTCACTC-TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGG  75
            |||||.|||||| |||..|||||||||||||||..|||||||.||||||||||||||||||||||||||||.||
Sbjct 3701  GGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCTCCTTGG  3774

Query   76  TTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTT  149
            |||||||||||||||..||||||||||.|.||||||||||||||.||.|||..||||||||.|||||.||||||
Sbjct 3775  TTCAAGCAATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTATAGGCGTCCGCCACCATGCCTGGCTAATTT  3848

Query  150  T----TGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT---------------------  198
            |    ||..||||||||..|||....||||||||||||||||||||.||||||                     
Sbjct 3849  TTTTGTGTGTTTTTAGTATAGACACGGTTTCACCATGTTGGCCAGGCTGGTCTCGAATGCCTGGCCTCAGGTGA  3922

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3923  TCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACCACGCCTGGCCTAAAATGTTTTTAA  3996

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3997  ATAACTGTACTTGTACTCACTCACCCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATCCCCATGATCAGATA  4070

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4071  TTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGC  4144

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4145  TACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCC  4218

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4219  TGCCCAGATAATGGCTCAATAACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAATACAGGCATTTAAAAAATT  4292

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4293  AAAATGACCAGGCACAGTGGCTCACGCCTGTAATCTCGGCACTTTGGGAGACTGAGGTGGGAGCATCACTTGAG  4366

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4367  ACCAGGAGTTTGGGACCAGGCTGGGCAACACAGGGAGACCCCCTCTCTACAAAAACATTTTTAAAAAATTAGCT  4440

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4441  GGGTGTGGTGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCTGACGTGGGTGGCTCACTTGAGCACAGGAGT  4514

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4515  TTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACCCCGTCTCTAAAA  4588

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4589  ATAAAATGTAAAATCACTGAAAAAATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTTCCA  4662

Query  199  -------------------------------------------------------------------  198
                                                                               
Sbjct 4663  AACTGTATATGATGCATCCTGTCTCCATGTGTAATATATTTTAATGATAAATGTATTTTTAACAGTG  4729

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