Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_158630.1
- Aligned Length:
- 4675
- Identities:
- 172
- Gaps:
- 4477
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATGTAGTCACTGTCCCGGAACCTGGGGCAGCGGAGTCCCGTGCGCCCTGTGGTGACAGCTCAGGAGGGTGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAATACTGCGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGCGGTGCAAGGTGTGCTGTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGGACTCGTGCGCTACCGCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGCACGGCGGCCAGGAACACGCTCTCTTCCTCTATACGCACCGGAGGATGGCCATTACCGGGGACGATGTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTTACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTACATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGAGCTTAGCCTCGTATTCCAACTGCCCTTTGGTTCACA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACCAGGATGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGCTTCGATTCTGCGACCCGGGATCCTGAATTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTGGCTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAGATGCCAACGCCGCGCGGTTGTAACTCGGCCCTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTTACCTGGCCAGGGTGGTTCTAACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCAAGACAGAATAAATCCAAGTCCGAAATTACTGACATGGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTCCTCCACTATCACAGTGTCGGACAAGGCTCATATTTTATCCATGCAGAAGTTTGGACTGCGAGATACAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTGAAATCACATCTACTACAGAAAGAAGAGGATTACACCTATATCCAGAACTTCAGGTTTTTTGCGGGAACAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACAATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCCAGATGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATTGTGTAGGGTTCCAGGAGCTTGATCTGAGTAAGGAAGCTTTTTTCTTTCACGATACCCCAAAGGAGGAAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGGTTCAAAGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAATATGCAAAGGTGAAGCTTATCCGACTGGTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGATTATGCTGCTGTTATATGTCAAACAGGAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAGACTGTGGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACAGGAATCATGGGGAGGATGGGCAACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAGCATCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGTTGTGAATTCTCACTTGGCAGCCCACATTGAAGAGTATGAGAGGAGGAACCAGGACTATAAGGACATTTGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCGAATGCAGTTTTGTCAGCCTGACCCAAGCCTTCCCCCTCTCACCATCAGCAACCATGAGGAGCCTAGCAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGTGTCTTGCAGCCGAGCTCTTCCATTCTGGTGAACCTGCAGCATCCTAGTTTGTGAGTGTGATCTTGTGGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGGGACCTCAACTACAGGATAGAAGAGCTGGATGTGGAAAAAGTGAAAAAGCTCATCGAAGAGAAGGACTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAATGCTGTATGCATATGATCAGCTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAGGCTTCACAGAGGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGCTCACATTCCAGCCTACTTACAAGTATGATACGGGCTCTGACGACTGGGATACCAGGATACATGTTATCCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGGTGGGCCCGAATTGCTCTTGCTGCCTCAGATGACTTAGCCACATGGACATGAAGGCCCTGATTCATCACTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCCACCTGAGCCAGGGCACTCGCCAGGCAGCGGGCACTGCTGTTTCTGTGAGTACTTCCAGTGTGGACTTTGCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTCAGTGAGAAGTGCCGTGCTCCTGCCTGGTGTGATCGGATTCTCTGGAAAGGGAAGAACATCACTCAGCTGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTTACCAGAGCCACATGGCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGGGTGAGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTCGTAAATGACGAGCTTTACCGGAAGACACTGGAGGAAATTGTTCGCTCCCTGGATAAGATGGAAAATGCCAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACATGCAATTGAAAGTAGAAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTTTACAATTCATAATGGACAAGTACCCTGTCATTTTGAATTCATCAACAAGCCTGATGAAGAGTCTTACTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAGATTGACTTGGAGCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTTCGTAAATAAGATGACAGCTACAAAGCTCAACTCGGGTGAAGACAAAATTGAGGACATTCTGGTTCTGCACT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGACAGGGGAAAGGATTACTTTTTGTCTGTGTCTGGGAACTACCTGCCCAGCTGTTTTGGGTCTCCCATTCAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACACTGTGTTACATGAGAGAGCCAATCTTGGACCTACCACTTGAAACCATTAGTGAGCTGACTCTGATGCCAGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATGGACTGGAGATGATGGGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTTGATT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACCTGTACCGAAATGCTGTCCAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAGGTCAGAATTTGAACATATC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGGGACTGCTTGGATACTGGAATGATTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGCCCTGCTGCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTCCTGGAGAGCCTTCCAGAGCCTGTCATCTGTTACAGCACCTACCATAACTGCTTGGAGTGTTCTGGCAACT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACACAGCAAGCAAACAGGTCATTTCTACTCTCCCCATATTCCACAAAAATGTCTTCCACTACTTGATGGCGTTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTGCGAGAACTGCTGAAAAATTCAGCAAAAAATCATTTGGATGAGAATATTCTAGCTAGCATATTTGGCAGCTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATTGCTTCGAAACCCAGCTGGTCACCAAAAGCTTGATATGACAGAGAAGAAGAAGGCTCAAGAATTTATTCACC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGTTCCTCTGCAACCCACTCTGAGCCTCTCTCTCCTCCTATTTTACTTGAGGCTGCCAATTACCAGCCCCACCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCAGCTATTTCCTGAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CACCATAATAAAACTGACATTCAATTTTCAACTTTAGTTATTTAACACAGATTTTTTTATTTTTTATTTTTTTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TATTTTGAGACGGAGTTTTGCTCTGTCGCGCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACTGCAACCTCT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCCTCCTGGGTGCAAGCAATTATCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCACACACTGCCACGCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CAGCTAATTTTTTGCATTTTAGTAGAGACGGGGTTTCACCGTGTTGCCCAGGCTGTTCTAAAACTCCTGAACTC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGGTAATCTGCCTGCCTCGGCCTCCCCAAGTGCTAGGATTACAGATGTGAGCCACCACGCCCGGCCTTTTTTTT 3626
Query 1 ------------------ATGGAGTCTCACTC-TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCAC 55
|||||||.|||||| |||..|||||||||||||||..|||||||.|||||||||||
Sbjct 3627 TTTTTTTTCTTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCGTTGGCGTGGTCTTGGCTCAC 3700
Query 56 TGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTG 129
|||||||||||||||||.|||||||||||||||||..||||||||||.|.||||||||||||||.||.|||..|
Sbjct 3701 TGCAACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTATAGGCGTCCG 3774
Query 130 CCACCATACCTGGGTAATTTT----TGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT- 198
|||||||.|||||.||||||| ||..||||||||..|||....||||||||||||||||||||.||||||
Sbjct 3775 CCACCATGCCTGGCTAATTTTTTTGTGTGTTTTTAGTATAGACACGGTTTCACCATGTTGGCCAGGCTGGTCTC 3848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3849 GAATGCCTGGCCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACCACGC 3922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3923 CTGGCCTAAAATGTTTTTAAATAACTGTACTTGTACTCACTCACCCTACCTCCAGGGCATAGTCAGTCTGGGCT 3996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3997 GAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGA 4070
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4071 AGCTGCTGGATAAAATAGGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATAT 4144
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4145 GCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCA 4218
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4219 ATACAGGCATTTAAAAAATTAAAATGACCAGGCACAGTGGCTCACGCCTGTAATCTCGGCACTTTGGGAGACTG 4292
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4293 AGGTGGGAGCATCACTTGAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAGGGAGACCCCCTCTCTACAAAA 4366
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4367 ACATTTTTAAAAAATTAGCTGGGTGTGGTGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCTGACGTGGGTG 4440
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4441 GCTCACTTGAGCACAGGAGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGA 4514
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4515 GGGAGACCCCGTCTCTAAAAATAAAATGTAAAATCACTGAAAAAATGAGTGTTCGGTGAAACAAGTGGGATTTT 4588
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4589 CTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATATATTTTAATGATAAATGT 4662
Query 199 ------------- 198
Sbjct 4663 ATTTTTAACAGTG 4675
