Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_158631.1
- Aligned Length:
- 4116
- Identities:
- 172
- Gaps:
- 3918
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACACGGGGGCGGGTTCGTCTGGGGGCGGAGCGCGCGGGACGGGCGGCGGGATGAGGAGCTTGAGGAAGCAGGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGAAATGTCTGCCGCCGCCGGCTCTCGGGAGCGCAACACTGCAGGTGGTTCTAACTTTGATGGTTTGAGACCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAAAGCTTGCAACCAAGACAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAAATCCAAGTCCGAAATTACTGACATGGTTCGCTCCTCCACTATCACAGTGTCGGACAAGGCTCATATTTTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATGCAGAAGTTTGGACTGCGAGATACAATTGTGAAATCACATCTACTACAGAAAGAAGAGGATTACACCTAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCCAGAACTTCAGGTTTTTTGCGGGAACATACAATGTAAATGGGCAGTCCCCCAAAGAATGCCTCCGGCTGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTGAGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTAGGGTTCCAGGAGCTTGATCTGAGTAAGGAAGCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGGGTCTTCATCCAGATGCCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATGCAAAGGTGAAGCTTATCCGACTGGTTGGGATTATGCTGCTGTTATATGTCAAACAGGAGCATGCAGCTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATCTCAGAAGTGGAAGCCGAGACTGTGGGGACAGGAATCATGGGGAGGATGGGCAACAAGGGAGGCGTGGCGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAGGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGAATTCTCACTTGGCAGCCCACATTGAAGAGTATGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGAGGAACCAGGACTATAAGGACATTTGTTCTCGAATGCAGTTTTGTCAGCCTGACCCAAGCCTTCCCCCTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACCATCAGCAACCATGATGTGATCTTGTGGCTGGGGGACCTCAACTACAGGATAGAAGAGCTGGATGTGGAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGTGAAAAAGCTCATCGAAGAGAAGGACTTTCAAATGCTGTATGCATATGATCAGCTGAAAATTCAGGTGGCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAAAGACTGTCTTTGAAGGCTTCACAGAGGGTGAGCTCACATTCCAGCCTACTTACAAGTATGATACGGGCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGACGACTGGGATACCAGGATACATGTTATCCCTTGGTGGGCCCGAATTGCTCTTGCTGCCTCAGATGACTTAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACATGGACATGAAGGCCCTGATTCATCACTCCCCACCTGAGCCAGGGCACTCGCCAGGCAGCGGGCACTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTTTCTGTGAGTACTTCCAGTGTGGACTTTGCATTTCAGTGAGAAGTGCCGTGCTCCTGCCTGGTGTGATCGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCTCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACCAGAGCCACATGGCCCTGAAGACCAGTGACCACAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTGTCAGCTCAGTGTTTGACATCGGGGTGAGGGTCGTAAATGACGAGCTTTACCGGAAGACACTGGAGGAAAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTTCGCTCCCTGGATAAGATGGAAAATGCCAACATTCCTTCTGTGTCCCTGTCCAAGCGAGAGTTCTGTTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAATGTGAAGTACATGCAATTGAAAGTAGAATCCTTTACAATTCATAATGGACAAGTACCCTGTCATTTTGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCATCAACAAGCCTGATGAAGAGTCTTACTGTAAGCAGTGGCTGAATGCCAACCCCAGCAGAGGCTTCCTCCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCAGATTCTGATGTTGAGATTGACTTGGAGCTCTTCGTAAATAAGATGACAGCTACAAAGCTCAACTCGGGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGACAAAATTGAGGACATTCTGGTTCTGCACTTGGACAGGGGAAAGGATTACTTTTTGTCTGTGTCTGGGAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TACCTGCCCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTTACATGAGAGAGCCAATCTTGGACCTACCACT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGAAACCATTAGTGAGCTGACTCTGATGCCAGTATGGACTGGAGATGATGGGAGCCAGTTGGATAGCCCCATGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAATCCCCAAAGAGCTCTGGATGATGGTTGATTACCTGTACCGAAATGCTGTCCAGCAGGAAGATCTGTTTCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATACTGGAATGATTGATAACCTCTCTGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGCAATCATTCTGTAGCCGAAGCCCTGCTGCTTTTCCTGGAGAGCCTTCCAGAGCCTGTCATCTGTTACAGCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTACCATAACTGCTTGGAGTGTTCTGGCAACTACACAGCAAGCAAACAGGTCATTTCTACTCTCCCCATATTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CACAAAAATGTCTTCCACTACTTGATGGCGTTTTTGCGAGAACTGCTGAAAAATTCAGCAAAAAATCATTTGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGAGAATATTCTAGCTAGCATATTTGGCAGCTTATTGCTTCGAAACCCAGCTGGTCACCAAAAGCTTGATATGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGAGAAGAAGAAGGCTCAAGAATTTATTCACCAGTTCCTCTGCAACCCACTCTGAGCCTCTCTCTCCTCCTAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTACTTGAGGCTGCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGATGCCTTAAGATAATTATGTGAGGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCCTAGTACCCCAATTAAGCCCACCATTGGTTAGCACACTCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGACATTCAATTTTCAACTTTAGTTAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTAACACAGATTTTTTTATTTTTTATTTTTTTTTATTTTGAGACGGAGTTTTGCTCTGTCGCGCAGGGTGGAGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCGGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTGCAAGCAATTATCCTGCCTCAGCCTCCCGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTAGCTGGGACTGCAGGCACACACTGCCACGCCCAGCTAATTTTTTGCATTTTAGTAGAGACGGGGTTTCACCG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGTTGCCCAGGCTGTTCTAAAACTCCTGAACTCAGGTAATCTGCCTGCCTCGGCCTCCCCAAGTGCTAGGATTA 3034
Query 1 ---------------------------------------------------ATGGAGTCTCACTC-TGTCACCC 22
|||||||.|||||| |||..|||
Sbjct 3035 CAGATGTGAGCCACCACGCCCGGCCTTTTTTTTTTTTTTTTCTTTTTTGAGATGGAGTTTCACTCTTGTTGCCC 3108
Query 23 AGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTC 96
||||||||||||..|||||||.||||||||||||||||||||||||||||.|||||||||||||||||..||||
Sbjct 3109 AGGCTGGAGTGCGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCTCCTTGGTTCAAGCAATTCTCCTGCCTC 3182
Query 97 AGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTT----TGCATTTTTAGTGGAG 166
||||||.|.||||||||||||||.||.|||..||||||||.|||||.||||||| ||..||||||||..||
Sbjct 3183 AGCCTCTCGAGTAGCTGGGATTATAGGCGTCCGCCACCATGCCTGGCTAATTTTTTTGTGTGTTTTTAGTATAG 3256
Query 167 AGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------------------------ 198
|....||||||||||||||||||||.||||||
Sbjct 3257 ACACGGTTTCACCATGTTGGCCAGGCTGGTCTCGAATGCCTGGCCTCAGGTGATCCACCTGCCTTGGCCTCCCA 3330
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3331 AAGTGCTGGGATTACAGGCATGAACCACCACGCCTGGCCTAAAATGTTTTTAAATAACTGTACTTGTACTCACT 3404
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3405 CACCCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATCCCCATGATCAGATATTTGATGGAAAGTCCTGAAAG 3478
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3479 GCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATAGGCTACAGCCACCTCAGATGCTTT 3552
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3553 CAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGTTCCTGCCCAGATAATGGCTCAATA 3626
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3627 ACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAATACAGGCATTTAAAAAATTAAAATGACCAGGCACAGTGGC 3700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3701 TCACGCCTGTAATCTCGGCACTTTGGGAGACTGAGGTGGGAGCATCACTTGAGACCAGGAGTTTGGGACCAGGC 3774
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3775 TGGGCAACACAGGGAGACCCCCTCTCTACAAAAACATTTTTAAAAAATTAGCTGGGTGTGGTGATGCATGCCTG 3848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3849 TGGTCCCAGTTACTTGGGAGGCTGACGTGGGTGGCTCACTTGAGCACAGGAGTTTGAGGCTGCAGTGACCTATG 3922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3923 ACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACCCCGTCTCTAAAAATAAAATGTAAAATCACTGAA 3996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3997 AAAATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTTCCAAACTGTATATGATGCATCCTG 4070
Query 199 ---------------------------------------------- 198
Sbjct 4071 TCTCCATGTGTAATATATTTTAATGATAAATGTATTTTTAACAGTG 4116
