Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_161183.1
- Aligned Length:
- 3175
- Identities:
- 172
- Gaps:
- 2977
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCAGAGCTCAACGTTCCCTAAGTGAGTGGCCTTTGACAGCAGTGCCAGGCAGCCCAGTGGGTGCAGGGCACACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACAGATGGAGGAAGGGCCAGGCATGCTTCCCAGACAGCCTCTGCCAGTCCAGGCAGGGGCTCCAGGGTGGCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGAAGGCAGCTTAGGCGGTGCCCGGCCCAAGGACTTGCTGTGCTCAGATCCTCCATTCAAGAGAGCTACAGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACGGGGGTGCTGGTGAGCAGGAGCCGAGACCATCTGGGGTGGGACCGACCAAGAGTTTGAGGTGTCCAGGGGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACGTGAAGATGACCTATTGCAGAGGGTCCCTTCTCATTCACGCTCTGAAGTCTGCACAGGGGCAGGGGCTACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCTCCATTTCAGTTTGGCCTCTGTTGTATCAGCCAGAGGCCAGCAGAACTCTATGGTCACTCCCCCGTGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGACAATTTGCCACCTCCACCGGCAGCCCAGGGCTCTGCCTGAATATTCTCGCCTGATCGTAGGATTGTGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGGATATTCTCATTGATCTCTAAGGAAAATATTGTTCGCTTTTTAAAAACATGATCTGGTACCATTTCATTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCTTTAAGGAAGAAAAATCACATGGTTGTCATGAGCATGTACCGACAGAGCTAGGAGGGCCAGCTGTTCCGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTGCCCAGGGCTGTCTTGTTTTTAAAATGGAAAGTTCGATGTCCTGGAAAACCCCTCAGTCCTGGGCAAACCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGTCACGCTGGATAGAAGGAGTTAGACATTCATATGATGTGCCGATGTCTTGCCAGTTGTAGAGTTTTGTGTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCTGTGTGTGGCCTGCGTGTCCACATGGGTGTGTAGGATGGCACCTACACACATACCTGAGGTCACCTCTTGG 888
Query 1 ------------------------------------------------------ATGGAGTCTCACTCTGTCAC 20
|||||.||||||||||||||
Sbjct 889 TCCAGTGAGCCAGAATCCTGGGACTTCATCATCTTTTTTTTTTTTTTTTTTGAGATGGAATCTCACTCTGTCAC 962
Query 21 CCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACC 94
|||||||||||.|||||||||..|||||||||||||||||||||.|||||..|||.||||||||||||||..||
Sbjct 963 CCAGGCTGGAGGGCAGTGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCTGGGGCTCAAGCAATTCTCCTGCC 1036
Query 95 TCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCA-TTTTTAGTGGAGA 167
||||||||||.||||||||||||||.||.||||||||||||..||..|.|.|||||||.| ||||||||.||||
Sbjct 1037 TCAGCCTCCCGAGTAGCTGGGATTATAGGCGTGTGCCACCACGCCCTGCTGATTTTTGTATTTTTTAGTAGAGA 1110
Query 168 GGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------------------------- 198
.||.|||||||.||.|||||||||.||||||
Sbjct 1111 TGGTGTTTCACTATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTGCCTGCCTTGGCCTCCCGA 1184
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1185 AATGCTGGGGTTACAGGCATGAGCTACCATGCCCGGCCTCAGAATCCTGGGACTTCTGCTGGAGCCAGGGGTCA 1258
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1259 GAACAGACTCCTCTACTGGGACTGCCTGGCAGGGAGGACAGACGCTCAAGGCGGCCCCATGAGAACACAGCCAC 1332
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1333 CTGGAAAAATGGTGGAAGGGAAGATTCTGCCAACCTCCTCCGACTCCCTATCTCAGTTACACTGGTCCATAATT 1406
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1407 TCTTTTCTTTTTCTTAAGTCTGTTTCATTGGTTTCTGTTCCTGGAAAATGGACACAATTCTGATGAATTCATGT 1480
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1481 ATTCTGCATCCACGTGTCAGCATCTCCAGCCTTGTGACGCAGTGCCTGGCTCAGAACAGGCAATCAGGCCATGG 1554
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1555 CATCTGAATGAATGAGAGGGTGTGCCCTGGCCGTATCTCAGGCAGCAGATGCATTCAGCTGCAGGTAACAGACA 1628
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1629 CGTAGACAAACAGTGGCTTAAAAAAGAGAGGCTTTAAAAGTATTTTGTTTTTCTTTCTTCACGTAGCAAGAAGT 1702
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1703 CTGGCATTTGGCATTCCCAGGCTGTGGCGTGACAGCTTTGTGAAGTTATCAGGGTCTCAGACCCTGACATATTT 1776
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1777 CTGCTCTGCTACCCTCAGCATGTAGATTTGATCTTCACGGCTACAAGAAACCTGCTGCTACTGCAGGCATCTTA 1850
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1851 CACGAGTTCCAGGCAGGAAGAGAAAGGAAAGGGTGACAGAGACAGAAAGCAATGTCCCCAGATACCCTTAGTTT 1924
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1925 TCCATCTCATAAGCCAGAATGATGTCACGTGGCATCCCTGGATGCACAGGAGGCTGAGAGATAGTGGCGTTTGT 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 TAGCTGGTCTCCTAGCCATCCTGAATGCCAAGTTTGTTATAAAGAAACAGAGGCAAAATGGCGATCAGGCAGGC 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 AACTGGGTGGTCTCTGCCACGGGCCCCTTGGCCATTCTTTGTAATGATGGTCTTTGTCTTGGACCCTATTTTGG 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 ATATTTGGGCACCTTTGTGGTACCCTTATGTGCTGGTTTTGCTGTTGTCTGCCCTTCAGGAATAGCAGCTGAGT 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 CAAGCTGTCCTTGGCTGCTCCAATCTGGAGTCAGAGGTTGGAGATTTCCATGGCTCCCCATGGCTCCTTGGGGC 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 CTCCTAAGAAAATGTTTTAATAAGGAAGTCCAAGGCTGAGACAGACATGCTCCTTCTTAGAGACACATGGGAAC 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 ATGCCTCTGCTCACAGCTGGTAGCCACAGATGTAAACCGTAGCCCATGGAACGGAGACAGTGAAGAATTGATGG 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 ATAAATGAATAATGATGATGGACAGCAGATGTATAAAAGGCATAAAAGGATAGTGTTAGGGCTGGAATGTCTTC 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 CCCCCAATTCATATGTTGAACCTTTAATGCCTAATACTTCAGAAAGAGACTGTGTTTGAAGATATGGTCTTTAC 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 AGAGGGAATAAAGTTAAAATAAGGTCATTAGGGTGAGCCCTAATCCAAAGGATGGGTGTCCTAATCAGAGGAGG 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 AGATTAGGACCCAGACACACACACACACACAGAGCCAGGTGAGGACACAGGGAGAAAATGGCCACGTACAAGCC 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 AAGATGAGAGGACTCAGGAAGAACCAGCCGACTCCACCCTTCAAAACTGTGAGAACATAGATGTCTGCTGTTTG 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 AGCCACCCTGTCTGCAAGCAGTCAGCAAGCATTCATTGAGTGCTTGCAGTATTCAAGGCACCACAGATACAATG 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 TTGAATAAGGCAAAGCACCTGCCCTCAGGTAGCTTGCAGTCAGGGAGGTAAGGGTAGTGGGCAGAGAGACCTGG 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 AAACAGATATTAGACCTGCACTAAGCATGTGTGGTTATTGAACAGTAAAAATGCCACCACAAATTGCGATATGA 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 TGTAAGTAAAATGCGTACTGGCTATTGAAGACTTGGCACAGAAAAATAATGTAAAATCTCATTAGTAATGGTTT 3108
Query 199 ------------------------------------------------------------------- 198
Sbjct 3109 TATATTGATTACGCATTGAAATAATACTATTTTGGACAGATTGGGTTAAATAAAATATTAAATTTGA 3175
