Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- XR_001737780.2
- Aligned Length:
- 3803
- Identities:
- 173
- Gaps:
- 3605
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCACGCCTGGCTAATTTTTGTGTTTTTAGTAGAGACGGGGGAGACAGTAGTTTAAATAAGTCCTGGCGTGAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTTACCCAGAGGGGGCATAAAATGAGGGGTCTAAGGCCAGCACCCTGGGAAATGTCAACGTAAGAACTGCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGAGGAGGATCCAGGAAGGGTCAGTGATGGGGATGACAAAGGGGGTGTCATGGGGAAAAGGGCAGAGGAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGACTAGTGACCACCTCTGCTCTGAGGTCATGTGGAGCAAGACTGAAAAGAGGCCGGGGATTGGGAAATGAGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACTGGTGGCCTTGTCCCTGGCGGCTCTGGGATGTGGGCCAGAAGCCAGTCCCTGGTGTTGAAATAGGATCCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAACAGCTCAACTCCAAATAGGCGCATTTCCATCGCCTCCATCGCCGCTGTAGCTGGTGGCTGTCAGATTGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCACGGTAGAGGCGGGTCAGGAAATGCAAGGAGAGCACTTTTGGAAGCGTCTGGATCCTGGGCCCTCGGGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCAGGGCCTGGGTCCTGATGTGAGGAGCCTGGAGCCTGTCCGTGGCCGAGAGGGCCTCCTTCCTCCTTCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCGACACGTCACCTGCTCCGTCCAGTCCACGAGAAGCAGCTGTGGCCCAAGCCCATGACCTGCCTTTCTTCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCGTCACCATCTGTGGCAGCCTGGGATACGCATGAGCTCCTCAGGAGGGCGGAGCTCCGTGGAACACACATC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGATGACAGGAGGGAGCCAGGAGCTGTGAGAAGACGGGGGAGCTGCCGCCGCAAGAATGCAAGACCCACGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCTACGATGCGGGGGAGCAGCGGGCATCTGAGGAAGGGGCGTCAGGGGCACATGGCCAGCCCTCTTCACCCCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTCTGCCCCAGGCCAGCCCCACTAGGAGTGACCCATTTTCTCCTAGCAGGATTCCTTGCATGGGGTGGCCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACCCAAAACACCCGCTCTGAGGATTCCCTGTTAACCACAGAGAAGGTTGACTCAAGTTTCTTTATTTGGCCATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAACTGTGGGGCATCTCACGGTGCTTCTTGGGTCCACTGGAGAGCCCTGGAAGCTCAGAAGAGGCAAGAGGGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTACTTCTCCCTTGTTTGGGCTTTGTTTGCTAAATACCAATATTAGATTAGGCAACTCTGCAAACAAAACCAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCTGGCCAGCTGCCCAGGGTGTTTAAAGTCCAAGACATGAAGGCAGGACGTGTGCCCGTGGACTTGCACACGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGCAGGCCGAGGGGAGAGCAGCCCGGCAGAGACCTTGGTGGTCCAGGGCTGAGCAAAGGCTTCCCCCACCGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCATCCCAGTGCGCTCAGCACAGGAGTTAGCGGCCACACACTTCAACCATTGTCTTATTTTAGAAAATGACATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCTGGGCGCGGTGACTCACGCCTGTAATCCCAGCATTTTGAGAGGGCAAGGTCAGGAGTGATCACTTTGGGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACCACGAGGTCAGGAGTTCAAGATCAGCCTGGCCAACATGGTGAAACTCCGTCTCTACTCAAAATACAAAAAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TAGCCAGGCGTGGTGGCTCACACTTATAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGAGGCGGAGGTTGTAGTGAGCCGAGACTGCTCCACTGGACTGCAGCCTGGGTGACAGAGCGAGACTCCGTCTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAAAAAAAAAAAAAAGAAGATGACATCCATGATGTTAATAAAAGCGGAGGTATTAGGGGAAGGGAGACATCCTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCAACTTTTCATCAGCTCACATTTGACCCTCAGCTTTTTTCTGTTAATCTAGTTATCATATCAACAGCGTTCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACAAATGACCAAAGACAGTGTCGGTGGCTCTTAGTGTTTGAAAGTAAAAATGTATAATATTTTTAAAATGCCAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGACTGAAAACAGGAATGAGGCATCATTGGTTGTAAACTGTCTCCTGAGCTGGTAATTCCATCTCCATCTCAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAGAAAAAACATACCCGTGTGCCCAGGGGCTCTCACCCCAGCACACCTCTTGCCCACTTAGCCTAGTTGATGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCAAATTACTGAGTGGAGTTTAAATGCCCTTCAGACTTTATAGGTGGAATTCCTGAAACGCGTCTATCTGGAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGGAGAGGTAGTAGTATTGGGAAGGGAACAGGAAGTAGGCGGTGTGGAGTGCTGTTTGTTAAATGCTATCTCTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACCGTCTGTGTTTGTTTCTACTTAGCTTGCCTTATCTCTCTCCTCCCGCCCACTCTGTCATTCAACTACCCAGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCCCCACCCTGGTTTCTTGTGTATTTTTTTCCAGGAAGACACACACACACACACACATTTATATATATATAAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAGGCCAGATCCCATCCTTCCTGGGTCCACCCTTCCTGGGCAGCCCCTCAACCCAGCACACAAACACACTGTTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTTTTCTCATCTCAATTCTCAATCCACCCTTGATCTTGTACCCCAATCCAGCCACTGCTCAATTCTTTGCTTTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTAAAATACAATTTGTCAAATTATATGTATGTGTGTTGGCAATTACATATATACCTGTATATTTACTCTCCAC 2590
Query 1 ----------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGC 40
|||||||||..|||||||||||||.|||.|||||||||||
Sbjct 2591 CCCTCTTTTTTCTTTTCTTTTTTCTTTTTTTTTGATGGAGTCTTGCTCTGTCACCCAGACTGTAGTGCAGTGGC 2664
Query 41 GTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGG 114
...|||||||||||||||||||||..|||||.||||||||||.|||||||.|.|||||||.|||||||||||||
Sbjct 2665 CCAATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTCCTAGCTCAGCCCCCCAAGTAGCTGG 2738
Query 115 GATTACAGACGTGTGCCACCATACCTGGGTAA------TTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATG 182
||||||||..||||||||||||.|||||.||| ||||||.|||||||||.||||..|||||||||.|||
Sbjct 2739 GATTACAGGTGTGTGCCACCATGCCTGGCTAATTTTATTTTTTGTATTTTTAGTAGAGACAGAGTTTCACTATG 2812
Query 183 TTGGCCAGGTTGGTCT---------------------------------------------------------- 198
|||||||||.|||||.
Sbjct 2813 TTGGCCAGGCTGGTCCCGAACTCCTGGCCTCAAATGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACA 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 GGCGTGAGCCACCACACCCAGCCTCTCTTTTTATTTTTTACAAAGATTCTAGCTTAGTACTTCCTTGCATTTTT 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 CACTTTGTCTTGGAGATCATTCCTTATCAGCACATGACCTTTCTTTTATTTTTTATTTTTAAAGGCTTGTCAAG 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 TGAAGCGGTGGGAGTGGAGAAGGAGCAAAGAAATCTGTTAACTGGTTGGGATCGGTGAGTTGTAAGCAGCCGCA 3108
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3109 TAAAGAACATTTCTGTTTTCTTGGATTACAACATGATTTCCATTGTATAGAAATACCGTATTTATTCCGCCAGT 3182
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3183 CCCCCACCCATAGTCACTTAAGTTGTTTCCAGCCTTCCCAATCTTCTTGCTGTTACAAGGCTGCCACGAATCAC 3256
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3257 CTTGTGTATACTTGATTTTTCTGATAAGTTAAAAAGTCCTAGAGGAGAAATTGCCCAATCCTTTGTGCACCTGT 3330
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3331 AATTTTGATAAATATTGCTAAGTTGCCTTCCATAAGGTTTGTACCAATTTACACAGCCACCGGCAATGAATGAG 3404
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3405 AGTGCACTTACCCACACCCCTACCAATGCAATCTGTTAGCAAATTTTCTGAACTTTGCCAATTTGGAGAAAATG 3478
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3479 GGTATTTCAGCGTAGTTTGAATGTATACTTACTTCTCTTGTGGGAAATTATGTTTAAGAGCCATTTCCTTTTCC 3552
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3553 GTGAACTATGTTTTAAAAATCTTTTCTGGTTTGTTTGTTTTATTGAGATGGAGTCTCACTCTGTTCCCCAGGCT 3626
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3627 GGAGTGCAGTGTGGTGCAATCTCAGCTCACTGCAGCCTCCGTCTCCCGGGTTCAAGTGATTCTCCTCCTCAGCC 3700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3701 TCCCAAGTAGCTGGGAACTATAGGGTCGCGCCACCACACCCGGCTAATTTTTGTATTTTTAGTGGAGACAGGGT 3774
Query 199 ----------------------------- 198
Sbjct 3775 TTCACCAGGTTGGCCAGGCTGGTCTTGAA 3803
