Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- XR_001738632.2
- Aligned Length:
- 3971
- Identities:
- 170
- Gaps:
- 3778
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCGGGCGGATCCCGGGAAGGCGGAAGGCTTCGGCAGAGCTGCGCCGCCGAGGCTGAGCGGTCCCTTCTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGGCCGCCCAGGTGCCCGCGCCCGTGGCGCTATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCGTGTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCGAGTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAACGTGAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGCCCTGCAGAAGTGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCATAGACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGCTCCAGTGTCTGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGTGCAAGGTCTCGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCTCACAGGCTGGAGTGCAGTGATACGATCTTCACTCACTGCGGGTTTCCAAGTAGCTGGGAGTACGAGCAC 666
Query 1 -------------------------------------------------ATGGAGTCTCACTCTGTCACCCAGG 25
|...||||||.||||||||||||||
Sbjct 667 ACACCACCACACCTGGCTAATTTTTAATTATTATTATTATTATTTTGAGACACAGTCTCGCTCTGTCACCCAGG 740
Query 26 CTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGC 99
||||||||||||||.|..||||.|||||||||||||||||||||||..|||||||||.|||||||..|||||||
Sbjct 741 CTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCAAGGTTCAAGCGATTCTCCTGCCTCAGC 814
Query 100 CTCCCAAGTAGCTGGGATTACAG----ACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGG 169
.|||..||||||||||||||||| || ||||||||.|||||.|||||||||.|||||||||.|||| .
Sbjct 815 TTCCTGAGTAGCTGGGATTACAGGCACAC----GCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGA-C 883
Query 170 GAG-TTTCACCATGTTGGCCAGGTTGGTCT-------------------------------------------- 198
||| |||||||||||||||||||.||||.|
Sbjct 884 GAGTTTTCACCATGTTGGCCAGGCTGGTTTTGAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAAA 957
Query 199 -------------------------------------------------------------------------- 198
Sbjct 958 GTGCTAGGATTACAGGCATGAGCCACCGCGCCCAGCCAATTTTTTGTAGAGAGGGGTCTCACTATGTTGCCAAG 1031
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1032 GCTGGTCTCAAACTACTGGGCTCAAGTGTTCATCTCACCTCAGCCTCCCAAAGTATTGGGATTACAGGTGTGAG 1105
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1106 CCACTGCACCTGGCCCTGTATGTTTTCTTTGGAGAAATGTCTGTTCACATGGTTTGCCCATTTTTTAATTGGGT 1179
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1180 CATTTGAGTTTCTTACATATTCTGGTCATTAACCCTTGTCAGATGTGTGGTTATTAACAGCCTTTTAAAAAGTT 1253
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1254 TGTCTGAGAGTCCTTTGTTGGCCGCCTTCCTAACTGAAGTCTTCTGTCTACTTATATGATTGAATTCTTTTATT 1327
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1328 TAAATGATGATTTAATCAACAACTATTTATGTGGTGTCTGTGTGTAAAGTCTTGGTTTATCAAATGTGTCAACA 1401
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1402 AAACATTTTATAGGATTTGGCCTCTGCCCTTCAGGGGCTTGCAGTTTAGTTGGAAGGTAGACCAAAAAACTTCT 1475
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1476 ATGTCAATATGTGCTAAATGCAGAATGTGTTAGCAGAGAGTTTTGACAGGCTGGTTTTGGGCTAGGAAAGGCAT 1549
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1550 GCCTTGAGCTGCAGGCAGTGGTCTTCTCTAACTCCCAAGTCACGCCACTCCCTGCTCTTGTGTGTCGGTTTAAA 1623
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1624 CTGTTACTCCAATTTCCTAAATGTTTACTAAGTAAAGGGCTATGGCACACAAATAAACTAAACAAAATAGTTCT 1697
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1698 AGTTAGACCCTTGGAAAAATCTTCCCCTTTTCTGGGCCTCAGTCTGTTTATCTATAAAATGCAAGGATAGAAAC 1771
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1772 CAGTGATTCGAAAACATTTATTGTTTGTTTTTTGAGACAGAGTTTCGCTCTTTCGCTTAGGCTGGAGTGTAGTG 1845
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1846 GCATGATCTCGGCTCACTGCAACCTCAGCCTTCCGGTTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT 1919
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1920 GGGATTATTACAGGTGCCCGCCACCACACCCAGCTAATTTTTGTATTTTTAATAGAGACAGGGTCTCACCATGT 1993
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1994 TGGTCAGGCTGGTCTCGAACTTCTGACCTCATGATCCACCCGCCTCAGCCTCCCGAAATGCTGGGATTACAGGC 2067
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2068 GTGAGCCACTGTGCCTGGCCAAAACATTGTTTTTAATTAGTGGGAGCCTTTCTTTAAATAAAACTACCCAGATG 2141
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2142 CTCAATTTGTAAATGAGAGTTGCTTTTGGAGGGTTGGGGGTTGCAGGTTAGCACAGAGACAGTGGAAGGGAGCT 2215
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2216 CAGTCTCTCCGGCCTTCCGCAGGCAGCGCTCGAGTACCTTCTAGGTACCTTCCCTCATGAGCAGTTTCAAAACC 2289
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2290 ATTGGGCCATTGGGGTAGGATGCATGGCTGTTTTTTGTTTTGTTTTGTTTTGTTTTTGAGACGGAGTCTGGCTC 2363
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2364 TGTCACCCAGGCTGGAGTCAATTGGCGCAATCTCAGCTCACTGCAACCTTTGCCTCCCAGGTTCAAGCGATTAT 2437
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2438 CTTGCCGCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACTACACCTGGCTAATTTTTGTATTTTCAGT 2511
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2512 AGAGACAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGGCATGGCTA 2585
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2586 GTTTTTATGTAATTATGAAATACAGCACTATTTGGTTTTCTGTACTACCAAACTCTGTCAAGAATAGTTAATAT 2659
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2660 ATGTTGTTAAAAAAAGAATAAAAATAATTTAAAAATAATGGTTAATATATATTGGGATATTAAAAGGGAAAGAC 2733
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2734 ATTATTAGCTAAGCCCCAAAATGTCCGAGAGGCAAGTTACTTATTGCTGCAAGTTTTCTTTTACAGCAAGAATA 2807
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2808 ATCACAACCTTAATGACCACCAATGATTTTACAATTCTTCTACGTTTTGTGATCATGCTGGCTTTAAATATATG 2881
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2882 GGTAACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAGGCTGAATGATGGATACATTATTCCTTCACAC 2955
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2956 AGTGGATTTTGAGTAACTGAACCAAAGGAAAAAGAAGCTCTTTGCTAAATTAAGGTCTTTTATAAATTTAGTAA 3029
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3030 ATCAGTTTATAATCTTTAAAGCCAAAGGTTTTTTTAGACTTGAAAGAAAGAGCCACTTAAATTCTTGTTTAAAA 3103
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3104 ATACCAATTTGCCTCCTCCTTCCTCACTTCGTTAGGTTATGGTAGTGCTCAGACATCTGCAGTGTTGAGGCCAG 3177
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3178 TCACTGTTGGAAGTCATCCAAGAAGCCCATTTTGAGGCCATTTTGAGCCTTACTCTTAAGTTCTCTATGAAGAA 3251
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3252 CTACATTGATTTGTTGGCTTTCAGAATCTTTTAGGAAATAAATCCTCTCCAGGACAAAAATGAACATGAATGGA 3325
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3326 GTGGCATTTTGTTCCAAGTCAGAGGTGGGCACCTATAATAAATGACTAGGGTTCACTTTCTGGGACTGATGTTT 3399
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3400 AATTGTAACACAGATACAACAGGGTGGCCTTGTTGTGTATAATACGGTATTATACCCGCATGTGCTCTAGCAAG 3473
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3474 GATACCAAGGCAAGCATACATGTAGCTGGCTTGAGTTTGTACCAAAACAGTCCTTCAACTTTGCACTGTGCCTT 3547
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3548 AAGTAATTACTAACAAAAGGTACTAGGATTAGCTGCAATCTCTACTTTCGATGAGGAAATCCCAGTAAGCTTTC 3621
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3622 TGATTCAAGTACAATGCTGCCATTTTTTAAAGGGCCACAACTATAGAATTACCACTGTTGGAATTTGGTACAAA 3695
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3696 ATATGTTTTGTCTATTGAAAACATACACGGTAAATGGTGTTGTTAGGTAGGTTCTGTCCAGTTCTTAGGGACTT 3769
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3770 TTTTCACATTATAGCATTTTTACCCTAAACATGATGTTGAGATTATTATATACTGTATTTTCTTCTAAATTAAC 3843
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3844 CCTAATGTTTAAAAACTCACTTTCCCCCTTTAATTGAAGGCATTGTTTTGTTAGATGCAGTAATGATGTTTACC 3917
Query 199 ------------------------------------------------- 198
Sbjct 3918 AGAGATTATTGTTTCCTATGCAAAATAAATTTTCATATTTTGAATTCTG 3966
