Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
XR_001738632.2
Aligned Length:
3971
Identities:
170
Gaps:
3778

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCCCGGGCGGATCCCGGGAAGGCGGAAGGCTTCGGCAGAGCTGCGCCGCCGAGGCTGAGCGGTCCCTTCTCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCGGCCGCCCAGGTGCCCGCGCCCGTGGCGCTATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGCGTGTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCCGAGTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAACGTGAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGCCCTGCAGAAGTGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCATAGACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGCTCCAGTGTCTGTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGTGCAAGGTCTCGCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTCTCACAGGCTGGAGTGCAGTGATACGATCTTCACTCACTGCGGGTTTCCAAGTAGCTGGGAGTACGAGCAC  666

Query    1  -------------------------------------------------ATGGAGTCTCACTCTGTCACCCAGG  25
                                                             |...||||||.||||||||||||||
Sbjct  667  ACACCACCACACCTGGCTAATTTTTAATTATTATTATTATTATTTTGAGACACAGTCTCGCTCTGTCACCCAGG  740

Query   26  CTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGC  99
            ||||||||||||||.|..||||.|||||||||||||||||||||||..|||||||||.|||||||..|||||||
Sbjct  741  CTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCAAGGTTCAAGCGATTCTCCTGCCTCAGC  814

Query  100  CTCCCAAGTAGCTGGGATTACAG----ACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGG  169
            .|||..|||||||||||||||||    ||    ||||||||.|||||.|||||||||.|||||||||.|||| .
Sbjct  815  TTCCTGAGTAGCTGGGATTACAGGCACAC----GCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGA-C  883

Query  170  GAG-TTTCACCATGTTGGCCAGGTTGGTCT--------------------------------------------  198
            ||| |||||||||||||||||||.||||.|                                            
Sbjct  884  GAGTTTTCACCATGTTGGCCAGGCTGGTTTTGAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAAA  957

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  958  GTGCTAGGATTACAGGCATGAGCCACCGCGCCCAGCCAATTTTTTGTAGAGAGGGGTCTCACTATGTTGCCAAG  1031

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1032  GCTGGTCTCAAACTACTGGGCTCAAGTGTTCATCTCACCTCAGCCTCCCAAAGTATTGGGATTACAGGTGTGAG  1105

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1106  CCACTGCACCTGGCCCTGTATGTTTTCTTTGGAGAAATGTCTGTTCACATGGTTTGCCCATTTTTTAATTGGGT  1179

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1180  CATTTGAGTTTCTTACATATTCTGGTCATTAACCCTTGTCAGATGTGTGGTTATTAACAGCCTTTTAAAAAGTT  1253

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1254  TGTCTGAGAGTCCTTTGTTGGCCGCCTTCCTAACTGAAGTCTTCTGTCTACTTATATGATTGAATTCTTTTATT  1327

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1328  TAAATGATGATTTAATCAACAACTATTTATGTGGTGTCTGTGTGTAAAGTCTTGGTTTATCAAATGTGTCAACA  1401

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1402  AAACATTTTATAGGATTTGGCCTCTGCCCTTCAGGGGCTTGCAGTTTAGTTGGAAGGTAGACCAAAAAACTTCT  1475

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1476  ATGTCAATATGTGCTAAATGCAGAATGTGTTAGCAGAGAGTTTTGACAGGCTGGTTTTGGGCTAGGAAAGGCAT  1549

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1550  GCCTTGAGCTGCAGGCAGTGGTCTTCTCTAACTCCCAAGTCACGCCACTCCCTGCTCTTGTGTGTCGGTTTAAA  1623

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1624  CTGTTACTCCAATTTCCTAAATGTTTACTAAGTAAAGGGCTATGGCACACAAATAAACTAAACAAAATAGTTCT  1697

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1698  AGTTAGACCCTTGGAAAAATCTTCCCCTTTTCTGGGCCTCAGTCTGTTTATCTATAAAATGCAAGGATAGAAAC  1771

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1772  CAGTGATTCGAAAACATTTATTGTTTGTTTTTTGAGACAGAGTTTCGCTCTTTCGCTTAGGCTGGAGTGTAGTG  1845

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1846  GCATGATCTCGGCTCACTGCAACCTCAGCCTTCCGGTTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT  1919

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1920  GGGATTATTACAGGTGCCCGCCACCACACCCAGCTAATTTTTGTATTTTTAATAGAGACAGGGTCTCACCATGT  1993

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1994  TGGTCAGGCTGGTCTCGAACTTCTGACCTCATGATCCACCCGCCTCAGCCTCCCGAAATGCTGGGATTACAGGC  2067

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2068  GTGAGCCACTGTGCCTGGCCAAAACATTGTTTTTAATTAGTGGGAGCCTTTCTTTAAATAAAACTACCCAGATG  2141

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2142  CTCAATTTGTAAATGAGAGTTGCTTTTGGAGGGTTGGGGGTTGCAGGTTAGCACAGAGACAGTGGAAGGGAGCT  2215

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2216  CAGTCTCTCCGGCCTTCCGCAGGCAGCGCTCGAGTACCTTCTAGGTACCTTCCCTCATGAGCAGTTTCAAAACC  2289

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2290  ATTGGGCCATTGGGGTAGGATGCATGGCTGTTTTTTGTTTTGTTTTGTTTTGTTTTTGAGACGGAGTCTGGCTC  2363

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2364  TGTCACCCAGGCTGGAGTCAATTGGCGCAATCTCAGCTCACTGCAACCTTTGCCTCCCAGGTTCAAGCGATTAT  2437

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2438  CTTGCCGCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACTACACCTGGCTAATTTTTGTATTTTCAGT  2511

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2512  AGAGACAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGGCATGGCTA  2585

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2586  GTTTTTATGTAATTATGAAATACAGCACTATTTGGTTTTCTGTACTACCAAACTCTGTCAAGAATAGTTAATAT  2659

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2660  ATGTTGTTAAAAAAAGAATAAAAATAATTTAAAAATAATGGTTAATATATATTGGGATATTAAAAGGGAAAGAC  2733

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2734  ATTATTAGCTAAGCCCCAAAATGTCCGAGAGGCAAGTTACTTATTGCTGCAAGTTTTCTTTTACAGCAAGAATA  2807

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2808  ATCACAACCTTAATGACCACCAATGATTTTACAATTCTTCTACGTTTTGTGATCATGCTGGCTTTAAATATATG  2881

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2882  GGTAACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAGGCTGAATGATGGATACATTATTCCTTCACAC  2955

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2956  AGTGGATTTTGAGTAACTGAACCAAAGGAAAAAGAAGCTCTTTGCTAAATTAAGGTCTTTTATAAATTTAGTAA  3029

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3030  ATCAGTTTATAATCTTTAAAGCCAAAGGTTTTTTTAGACTTGAAAGAAAGAGCCACTTAAATTCTTGTTTAAAA  3103

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3104  ATACCAATTTGCCTCCTCCTTCCTCACTTCGTTAGGTTATGGTAGTGCTCAGACATCTGCAGTGTTGAGGCCAG  3177

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3178  TCACTGTTGGAAGTCATCCAAGAAGCCCATTTTGAGGCCATTTTGAGCCTTACTCTTAAGTTCTCTATGAAGAA  3251

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3252  CTACATTGATTTGTTGGCTTTCAGAATCTTTTAGGAAATAAATCCTCTCCAGGACAAAAATGAACATGAATGGA  3325

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3326  GTGGCATTTTGTTCCAAGTCAGAGGTGGGCACCTATAATAAATGACTAGGGTTCACTTTCTGGGACTGATGTTT  3399

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3400  AATTGTAACACAGATACAACAGGGTGGCCTTGTTGTGTATAATACGGTATTATACCCGCATGTGCTCTAGCAAG  3473

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3474  GATACCAAGGCAAGCATACATGTAGCTGGCTTGAGTTTGTACCAAAACAGTCCTTCAACTTTGCACTGTGCCTT  3547

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3548  AAGTAATTACTAACAAAAGGTACTAGGATTAGCTGCAATCTCTACTTTCGATGAGGAAATCCCAGTAAGCTTTC  3621

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3622  TGATTCAAGTACAATGCTGCCATTTTTTAAAGGGCCACAACTATAGAATTACCACTGTTGGAATTTGGTACAAA  3695

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3696  ATATGTTTTGTCTATTGAAAACATACACGGTAAATGGTGTTGTTAGGTAGGTTCTGTCCAGTTCTTAGGGACTT  3769

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3770  TTTTCACATTATAGCATTTTTACCCTAAACATGATGTTGAGATTATTATATACTGTATTTTCTTCTAAATTAAC  3843

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3844  CCTAATGTTTAAAAACTCACTTTCCCCCTTTAATTGAAGGCATTGTTTTGTTAGATGCAGTAATGATGTTTACC  3917

Query  199  -------------------------------------------------  198
                                                             
Sbjct 3918  AGAGATTATTGTTTCCTATGCAAAATAAATTTTCATATTTTGAATTCTG  3966

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