Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
XR_001739702.2
Aligned Length:
3447
Identities:
172
Gaps:
3251

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTCCGTGTGCGCGGCGCATACGCACCTGGGTTGTCTCGAGCCTGCGGTAGTGGCCAGATCCCAGACATCCGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAGATCCCGTGAAAAGCTTCTTCTTGGTTTCTTCGTACATTCTGGATCCACCCCTTTCATGCATATTCCAGACC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACATTTCCACTGGAGCAGTTGAAATGAGAGAGATGGGAATGGGACTCACCCGAACCAGAGGAATTTTTATTACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GACCCATTAACAGAGGTGTCAAAGTCACAGGAACAAGGATGTGCACCTCAGAAACACAGAGGCTAGCCTGGCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAGCTCAGCTGCACAGAGTCTGTCCTGAGAAGCAGAATGCCACTGTCCCCTGGGCCCTCCAGACTGCCAAGGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCTCAGTTTCAGAGAGCAGGCTCCCTGTGGCCTCACACGCCGGCTGCCAGCTGGGCCAGGTAACTCTGGCCAGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTGCACTGTGAAGAACACGAGAGTCGGCGGAGACCTGTGCCTGCTCTTCTCAGCCTCAATGTCTGGAAGACAAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAAAGGCATCCTGCTCCCAAGATTGTGGTGGAGGCCAGCAGGGTGACGCACATGAAAGCCACTGGAGATAGATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCACTTGTTCCCACCCACTGCCCACAACAGGCCCAGGACTGCCTCAGCCCCGGTGGACCCCAGAGCCAGCAGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCTTCAGAATGGAAGGTGCCAAACACCATCGGAAGGCGTGGTTCTTTTCAGAGAACCAGACTCTGAGACTGTGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTCCCACTATGAGTCACCACCTCTGATTCCTGAGGTCCCCTCCAGTCATTGGCTCTCTCCCAAGCCAGCCAGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGATCAGCCTTGAGGACAGCAGAGTGTCTGCCAAGAGAGATCTGTGAAGTTTCCCATCACCGTGGCAGTCCACA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATGTGAAGCCCCTGAGGCCACCCTTCTCCATGTGTCCCCCACACTGTCCCTGACCCTCCCACCATCCTAGAAAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCAGCCTCCCAGGTCCTCTGTCATGGAAGTAATTTACAGCAAGGCAGAAAGAGCTGAAAGATTTATAAATGTGT  1036

Query    1  ----------------------------------------------------------ATG--GAGTCTCACTC  14
                                                                      |.|  |||||||||||
Sbjct 1037  AAAATTTACAAAGGTGTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGAGGCAGAGTCTCACTC  1110

Query   15  TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCT  88
            |||..|||||||||||||||||||||...||.||||||||||||||||||.||||||.|||||||||..|||||
Sbjct 1111  TGTTGCCCAGGCTGGAGTGCAGTGGCACAATTTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCT  1184

Query   89  CCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGGGTAATTTTTGCATTTTTA  160
            ||..||||||||||||||||||||||||||||||  |||  ||||||||..|||.|.|||||||||.|||||||
Sbjct 1185  CCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAG--GTGCATGCCACCACGCCTAGCTAATTTTTGTATTTTTA  1256

Query  161  GTGGAGAGGGAG--TTTCACCATGTTGGCCAGGTTGGTCT----------------------------------  198
            ||.||||..|||  |||..||||||||||||||.||||||                                  
Sbjct 1257  GTAGAGACAGAGTTTTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCTGCCTCA  1330

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1331  GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGTGCCCGGCCTACAGAGGTGTTTCTGAGTGGAGAAAC  1404

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1405  CACTGCCTGGTTGGACTGACTGCCCAGTTCCACCACCCTGTGAGCCCATGAGTGAGCTCACTGCACTTGTTATA  1478

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1479  GACATCCTACCACCAGCAGCCTGATTTTGCTGAGTCCGTAGCTTACAACTCCAATCTCATGGCCCTGCCTTTCA  1552

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1553  CCTCACTTGCTGCCTTAAAAACCTGCAGACTGAGGTGGCGTAGAAGCTGTGACATCCCAGTACCCAGAAGTTCA  1626

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1627  TCTCACACCCAGATCTTGGTTTCTAAATGTCATTCTCTACTAAAAGGGACCAGGGCTGGTACAGGAGAAGAGCA  1700

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1701  AGAGCTTGGAATATCTTATACCTGAGAGTAAGGAAGTGCTCAGAGAATCACAGGAGCACGTTAAAAGGACATAG  1774

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1775  AAGTCAGTTTAATGAGACTGCTTCTGGCCAAAGTTGGAACACATCAAACATTAAAACAATGATGGTAATGGATT  1848

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1849  AGATTCCATAGAATAAAATCCTTGAGGACATAGTTATATAAACATAACTGAGGAAGAAGGAAAAGCTCTCCCTA  1922

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1923  ACAGAATAATACAACTAGTAAATGGGAAAGGAAAGGAGTTAGGAATTCACGCTGGGTATTGAAACTAGTGGGTG  1996

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1997  AAAGCTCAATGAATCGGATTCTTAGTCTCAATGTCTCTCCTCTCAATTTAGTAATTATAGTGGAGTAATCATGA  2070

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2071  CTTTACAGTGGAGAAACCTGGCCAACACTACCTTCACAACACTAACAAAAACCTTGCAGACCTGCAGCCTAAGC  2144

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2145  TCCCAGAAGTCACCTGCTGAAATGCCTTCAAAGAGTGACCTCTCTGCGTGTAGTGCTCAGCAACTTGGGCTCAG  2218

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2219  TGTCTATTTCCACAAGCTACAAACCAGAATACAGTGGAATTCAGCCCATATGTGGTAATTTATCTACCAATCAA  2292

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2293  GGACCTTTGACTCCAAAAATTACCTTTTTTGTACAAGTGACTACCTGGTGTAGAGCTCAGACATGGCTTTGAAT  2366

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2367  TTTTGCCATGCTGTGTGAGCTCAGGCAAGCTGCTTCACCTCTTTGAGCTTCAATCTTTTATCTATAAAATGGGA  2440

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2441  ATAACAATAACTTAATGAAACAGCAATTCCAGTGTTAGGTATTTCCTCAGGAGAAATGAAAACACGTTCACACA  2514

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2515  AATAATTGTACATGTATGTTTCTACACGCTTTATTCATAATAGTCATAAACAACCTAAATATTCATCAACTGGT  2588

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2589  TAGCAGAGAAAAGAGCAAACCACTGATGACATGAACGAATTTCAGAAGCACTGTGCTCAGTGAAAGAAGCCAGA  2662

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2663  CAAAAATTACATCTTACATAAATTTCATTTATATGAAATTCTAGTGAAGGCAAAACATATAGCCAGGGGCCAAG  2736

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2737  AGGGGAGGATGGTCTGCAAAGAGGCAGGAACTTCTTCCTGGGGTGATGGGAATATTCTGTGTCATGAACATCGT  2810

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2811  GATTGTGGTTACAAGACTATACTTTTGTCAAAACTCATCAAATTGTACACCTAAAATGGATGCATTAAGCCTCA  2884

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2885  ATACAGCCAATAAAAGATACCTACGTTACAGTATCTTCTGAGGAGTAATGGGGTGATATATATGCAGCCCCAAG  2958

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2959  TTCAGTGCCTGTGGTGAGAGGAGTCCTAAAATAGTACCTGTGACCACGCCCCACGGTCTTAGACCTGGGCAGGG  3032

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3033  CAACTGTGCAGACAGCAGGCCCAGCCAGGAAGCAAGCTGGCAAGGCGTTCTGCAGCGAAGAAAGACCTTAAATG  3106

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3107  CTCTGGGGGATACGGACTGAAGAGGTGTTGAGAGGTAACTGCATACCTCTCACTTCTCAGGAACTGCCAGTTCC  3180

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3181  CTGGGCAGAATCAGGACCTGGGACAGACCTGCCTGCTGATGAGATGGCCCCACACCATCTGCAGGCCAGATTTG  3254

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3255  GTGCTGTGGACAATGTCGGAGGGGACAGTCTACAGGACAGCCAACGGCTTTCAAAAATTCTGATATGATCAACT  3328

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3329  GGTGACACTACTCAGAAGACTGTGTTAAGAATTCCGAATTGGGGCCGGGCAAGGTGGCTCATGCCTGTAATCCC  3402

Query  199  -------------------------------------------  198
                                                       
Sbjct 3403  AGCACTTTGGGAGGCCAAAGCAGGTGGATTGCTTGAGCCTAGG  3445

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