Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
XR_001747200.1
Aligned Length:
4026
Identities:
171
Gaps:
3831

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAGCCCGGAGCAGCGGCAGCGTCGGTGGCGTCGAGAGCGAGCGGGCCCGGGAACGGCGCGGGTGGTAGAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGCCGCGGGCTCGATTCTCTAACCATGGCACAGGTAGAGAAACGTGGAGGTTTGCTCCGGAAATCTTCAGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCCAAAAAACCACTGAAGGAAAAAGTGGTGCTGATGTATGATGAGATCTTCATGACAGAGGACCCCAGTAAGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGTCCTCGGTTTTGGGAGGAGCTCTTTCTCATGAAGGTGAATTTAGAGTACCTAGAAGGCAAGCTGGAATCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTGATGGTGAGGAGTTAATGAAGATCAAGGACAATATTAATTGCTTATTCCAACACTGCATCCAGGCTCTGGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAGGAGCATCCAATTCGGGTTGTCAATGCATTGCAGACCCTGTGCGCACTCATTCGAGGAGTCCATCAAAAGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TAAGTCTACCTCTGGGTTTGACATTATCAACATGCTGATGGGCTTTGACAAGGCGGAGCTGTGCATGAAGAACT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGATGGAGAGTTTGGATTCATTGCTTTGTGCAGAAGGTTCTGAAAGTCTGAAGAGTTTATGTCTGAAACTTCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTTGCTTAGTGACCGTGACAGATAACATCAGCCAGAACACTATTCTCGAGTATGTAATGATCAACAGCATATT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAAGCAATTTTACAGATACTTTCCCATCCCCCAAGTCGTAGGGAGCATGGGTATGATGCTGTCGTCCTCTTGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTTTGCTGGTGAACTATAGAAAATATGAGTCTGTGAATCCTTATATTGTGAAGCTGTCTATCGTGGATGATGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCCACACTCAATGGAATGGGACTTGTAATTGCTCAGGCTTTATCTGAGTACAACAGGCAGTATAAAGACAAGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGAAGAACACCAAAGTGGTTTTTTCTCTGCTTTAACAAATATGGTGGGCAGCATGTTCATAGCAGATGCCCATG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAAAATCTCAGTACAAACCAATGAGGCCATTCTTCTGGCACTTTATGAAGCTGTTCATTTAAATCGCAACTTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATCACAGTATTAGCTCAGAGCCATCCAGAAATGGGCTTGGTGACGACCCCTGTCAGTCCTGCTCCTACAACCCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGTCACACCACTTGGGACCACACCGCCTTCCTCTGATGTTATAAGTTCTGTGGAACTCCCACTGGATGCAGATG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TACAGACCAGTAATCTACTGATAACCTTTTTAAAGTATAGCTCAATTGTCATGCAGGACACCAAAGATGAACAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGGCTTCACAGTGGCAAACTCTGTCTGATTATCCTTACATGTATTGCAGAGGATCAATATGCCAATGCATTTTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCATGATGACAACATGAATTTTCGAGTAAACTTACATAGAATGCCTATGAGACACAGGAAGAAGGCAGCAGACA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGAATCTTCCCTGCCGTCCTTTAGTATGTGCAGTACTGGACCTGATGGTAGAGTTTATTGTAACACACATGATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AAGGAGTTTCCTATGGATCTCTATATACGCTGCATCCAGGTAGTACACAAACTGCTCTGCTACCAGAAGAAGTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCGGGTACGCCTGCATTACACCTGGCGGGAGCTCTGGTCAGCCTTGATAAATTTGCTGAAGTTCCTTATGTCAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATGAGACTGTACTTTTGGCCAAACACAACATTTTTACATTAGCCCTTATGATTGTGAACCTATTTAATATGTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATCACATATGGCGACACATTTCTGCCAACCCCCAGCAGCTATGATGAACTTTACTATGAGATTATCCGCATGCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCAGAGCTTTGACAACCTCTACTCCATGGAGCCATCATCAACCACTTTAACCCCAAAATTGAGTCCTACGCTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGTGAATCACATATCCCAACTGTCAGAGGAGCAGGTGCTGGAGGTGGTGAGAGCCAACTATGACACGCTCACGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGAAGCTGCAGGATGGCCTGGACCAGTATGAGCGCTACTCAGAGCAGCACAAGGAAGCTGCCTTCTTCAAAGAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTGGTTCGATCCATTAGCACCAACGTCCGGAGAAACCTGGCCTTCCACACACTCAGCCAAGAAGTCCTGCTCAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GGAGTTCTCCACTATCTCCTGAGGCCACGCCTACCTGAGCAGCCTCTGACTGCCCTTACCCATGAGGATCATGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCTGGAGGGGGAGCGAGGGGAGAGGGGGCTGCCCCCGAGGTTGGAGAGAAACACAGATACCAAGTTCTCTTGGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAAGACCGCACTTCAATGGAGCTTGGGCAGCAGGGGCAGGAGGGTCAAGCCAGGGATAATCTTATTTGGGGAGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AATGGGTGGGCACAGTGGGGAGAGGCCTCCAGGAATGTGGGGACTTCCAGAGTGGGCTCCCTAAACAGCCCCTC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ACATTTCCAATCTTGAGGTTACAAGCTGTAGCTACTGACTAATTTTCGGGAGCTGGTGAGGCAAGCCTCAGGGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AATGCCAGCACCCTGAAAGTCAGTGGCTCTGCTCGGCTTCTGAAAACAGATCAACTCTCAGATATAGCTGGAGC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TACATCCTGCTTCCTTTGGGCCTGGGGCTGTGCTTGGCTTGAAATCTGTGTCCCCTGCCTGCACTGGCACTTTG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TCCAGTCATCGGGACCTTTGGCTCAGATTTAGGGTAAGATAGGAATAGGGTACCTTTTTCCTTTTTTTTCTGAG  2664

Query    1  ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGC-TCACTGCAACCTCTGCCTCCTG  73
            |.||||||||||||||||.|||||||||||.||||||||||||||||.||| |.||||||.||||.||.|||||
Sbjct 2665  ACGGAGTCTCACTCTGTCGCCCAGGCTGGAATGCAGTGGCGTGATCTCGGCTTTACTGCAGCCTCCGCTTCCTG  2738

Query   74  GGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAG--ACGTGTGCCACCATACCTGGGTA  145
            |||||||||.|||||||..||||||||||||.|||||||||||.|||||  .||||||||||   .||.||.||
Sbjct 2739  GGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGAGCGTGTGCCAC---GCCCGGCTA  2809

Query  146  A-TTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------------  198
            | ||||||.|||||||||.||||.||.|||||||||||||..|||||.||||||                    
Sbjct 2810  ATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTACCCAGGATGGTCTCAATATCCTGAGTTCATGAT  2883

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2884  CCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCAGCCAGTTTTCCTATTTTC  2957

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2958  TGAATTCAGAATTGACTTCTCTGGGAAAACTGGAGATGAGAATCTGCCCAGTGCTCTGCTGTCCAGTCACCGCC  3031

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3032  TTTTGAATTTTAGTTTTGGCACCAGGAGTACCGTTAGCTTTCCCCTTCTTCTGGCCCATTTGACTCATCAGCAC  3105

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3106  AATAGGGTCACCACCTTAACTTTTAATTTCTAATCTGCTTTACTGTCTTTAGGGTGTGTATGAAATAAACATTG  3179

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3180  ACAGGCTTTCTGGAGCCCTCAAGGTGCCTACTTTGCTGGTTCCCTTTCCAGCAGCTCCCCCACCTCCCTTAGCC  3253

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3254  CCCCCTCCTCTGGCAGCCTCTCCTGCCTCTGCTGAGCTCCCCTCCACGTGTTCCACCCCCTTACCCTGCTGTTG  3327

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3328  TTTACATCCAACCTGCCTGAGAATTTCCTCTGGGGAGGAATCTATTCCTGTCATGGTCTAGTGCCTGGGAGGGA  3401

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3402  GAGAACTTTCTGGGGGTAGGGTGCCCTCCATCTGAAACAGGCCAGGTGAGCATCATGCATAAGGCCTCCATTCT  3475

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3476  GTCCGCTCAGATTCTGGGTGGGGCCACAGGCAAATCTCCTGACTTATGGGGAGTTGGCTTGTGGTTCCTCCCTT  3549

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3550  GGATAGCCTCCATGGAACCACTATAGGCTTTCCCAACAGCTGCCTCTGAAATAGCTGCTGCTTCGAGATCCTCC  3623

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3624  CTTTTTAAAGCACTTTCTAAAGCCCTCAGGATGGCGGGAGCAAACAGCACTGGTATATTCTAGGAGTAAGTGCA  3697

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3698  GGAATTCAGCAGTGAGAGCATGTCTGGGACCACCTGGACTGCCATCCATTTAACCTCAAATCTCTTTGGGATAC  3771

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3772  TCGCCCTCCCTGGGAACCAGAGTTCTGGCTCTAACATTGAGCAGCTATGCACTAGTTCCAGAGAAGCCACTAAC  3845

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3846  AGGCTGCCATGTGTAGATGTAGGTTCTTAAGAGATCACAGGCTGGGTCATCTGATCACTGGATGGATAGCTCAG  3919

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3920  CCTGGGGCATTTAGTGTTTTCCCTGGTGATAAATCCCCAAGGCAGCTGGATTTGGAGCTGGTGGCAAGTTGAAA  3993

Query  199  ------------------------------  198
                                          
Sbjct 3994  TTATTAAAAATTGATTTGTGTGGGACTGTC  4023

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