Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- XR_001753711.1
- Aligned Length:
- 2230
- Identities:
- 171
- Gaps:
- 2036
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCGAATATTTTCCATGATCAAACGCTGTTCATTGGCTTTCCCTCCTCCGCTAAGGCGGAGCCTACTTCTCTTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCCCATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCAATACCTAAGGGAGGCTGGGAGGCGTGTCCTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGACCGTAGTTCTTATTGGTTTCGCTGCTCGCTGTGGGGTGGGCTGGTGCAGCCGCAGCTGTTGCTTATTGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCGATTCCATGGGGAGGAACTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTACAGGTTTCAGGGCAAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCATGCGTTCCGGGGGCCGCGGGCGACCCCGCCTGCGGCTGGGGGAACGTGGCCTCATGGAGCCACTCTTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCCGAAGCGCCGCCTGCTACCGCGGGTTCGGCTCTTGCCTCTGTTGCTGGCGCTGGCCGTGGGCTCGGCGTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGCCGCTGGGCCGGGAGCTGCGGGTCCCATTGAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCTGGAGGCCACG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCAGTGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTGGCAATGTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTGCCATTATGACTCGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGCCCAAGCACTTGACCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCCGGTGACCCTGCAACTGCTCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCATGGAGTCTATACCTCACAGCCCCGGCCCCACCAGGATCCAGGCTATTAGAAGCGTCTGCACCGTTTGAACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCCCTTCCCTGCTGTCTGGCACACCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCTTTGTCTCCTAATTGTGCTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAATTGGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAA 1628
Query 1 -----------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGC 51
|.|||||||||||.|||..||||||||||||||||||||.|.|||||.|||
Sbjct 1629 ATACTGTTCTTTTTTTTTTTGAGACGGAGTCTCACTGTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGC 1702
Query 52 TCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACG 125
|||||||||.|||.||||||||||||||.||.|||||||..||||||||||||||||||||||||.||||| |
Sbjct 1703 TCACTGCAAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAG--G 1774
Query 126 TG--TGCCACCATAC-CTGGGTAA-TTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGG 195
|| .|||||| || ||||.||| ||||||.|||||||||.||||.||.||||||||.||||.||||||.|||
Sbjct 1775 TGCCCGCCACC--ACGCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGG 1846
Query 196 TCT----------------------------------------------------------------------- 198
|||
Sbjct 1847 TCTCGATCTCCTGACCTTGTAATCCGCCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGC 1920
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1921 ACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAAAAGACTGCTGGGTGTGGTGGCTCACACCT 1994
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1995 GTAATCCCAACACTTTGAGAGGCTGAGGGGGAAGGATCACCCGAGGTCAGGAGTTTGAGACCAGCCTGGTCAAC 2068
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2069 ATGGCGAAACCCTGTCTCTACTAAAAATACAATAATTAGCTGGGCATGGTGGTGGGCGCCTGTAATCTCAGCTG 2142
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2143 CTTGGGAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCACACCACTG 2216
Query 199 ---------- 198
Sbjct 2217 CACTCCAGCC 2226
