Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
XR_943500.3
Aligned Length:
2913
Identities:
170
Gaps:
2719

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCCCGCCCCTCCTCGGACTCTACCCAGTACTGAACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCTCAGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CATGGCGGTCGCGGGGCCCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCAGATACTGAAGGTTTTGTTTCCTTCTTGGTCATCACAAAATGCCTTGATGTTCCTGACCCTTTTGTGCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCCTACTGGAGCAATTTGTGATCTACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGGTCCTGGGAAACAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGACTTGGAAGGGTTTAAGACTCTGACATTCCTGGCTGTCATGCTCATTGTTCTGAACTCCACGCTGAAGAGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTGATCAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTCTAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACCGTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGAAGCTGGAGGGAGATTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCACA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTGCATCTACCTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTGGACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCCTGCTCATC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGCTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGTGCAGATGCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCTGCCACAAAAGCCATTCTTCACTGACGGGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCCTTCGGGAGCAGGTGATATATCCCCTGAAGGAGGTCTACCCCGACTCAGGAGAGATGCCCACTGGGACAAGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAAGTGATGCCTTCCTTCACCCACCCCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGCCTTCGCCCAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CATTCTGAGGCCCCCACCCCTGCATCATCCATGATGTGCCCTGTCTATTCTTTTTTTTTTTTTTTTTTTTTTTT  1702

Query    1  ------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCC  68
                  |||||||.||||||||||||||||.||||||||||||||.|||||||.||||||||||||||||..||
Sbjct 1703  TTTGAGATGGAGTTTCACTCTGTCACCCAGACTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACC  1776

Query   69  TCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTC--CCAAGTAGCTGGGATTACAGACGTG--TGCCACCATAC  138
            |||.|||||||||||||||.||..||||||||||  ||  |||||||||..|||||  |||  .||||||.|.|
Sbjct 1777  TCCCGGGTTCAAGCAATTCCCCTGCCTCAGCCTCTTCC--GTAGCTGGGGCTACAG--GTGCACGCCACCTTGC  1846

Query  139  CTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------  198
            |||..|||||||||.||.||||||.||||..|.||||||||||||||||||||.||||||              
Sbjct 1847  CTGCCTAATTTTTGTATATTTAGTAGAGACAGCGTTTCACCATGTTGGCCAGGGTGGTCTCCATCTCCTGACCT  1920

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1921  TGTGATCCACCTGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCACAGCCTTGCCCTGT  1994

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1995  CTATTTTGACCAGCCAGGAGGCTCTGGCTTTTTGCAGAAGGCTTCTTTGTTGTGCAGGTTCTGCCGATGATGAG  2068

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2069  AGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGT  2142

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2143  GGACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGC  2216

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2217  AGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATC  2290

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2291  GGCCAGCAGCTGGGGATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCT  2364

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2365  GAAACTCTGTGGAGGAGGAAGATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTCTGGCTTTTGGAAGGAGA  2438

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2439  GCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGC  2512

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2513  CACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTA  2586

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2587  GGTTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTCAGCCAGAGCCTCCAT  2660

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2661  ATGCTTGAAGTGCTGATTACCTACAAATGATTTCAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATC  2734

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2735  TGTAAGAAATGAAAGAAATGACTCTTGGAGTCAAGAGATCTGGAAATCTTTTAATCAGTTAAATTGTGCAGCAA  2808

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2809  TAGATTTTTAACTTTAACTGACCATTTAAGTTTTTTAATAAGTTTTTTACAAAGAAAAGTTAAACATTAAAAAG  2882

Query  199  ---------------------------  198
                                       
Sbjct 2883  AATTACAGCTTTCTGTCTTCTCTATCA  2909

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