Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11622
- Subject:
- XR_001752420.1
- Aligned Length:
- 6300
- Identities:
- 633
- Gaps:
- 5667
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGGACTGTCTGGGCTGTGAGTGGCACCTCCTGTGGTTCCCCCAGGAATGGGTGGTGTGGACAGCTGCCAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTGAAGACCACCCCTGGCTCTGTGCCCCTGTCTCATCAGATGGGGGCTCCGGAGGTGGCGCCCAGGCTCTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTACCCTAGGTCTGCAGACTAGCGGGCATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCATCCTCGATGTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGAGACCCCAGGGGACCAGGGCCAGGGCCCCAGCCCCTATGATGAAAGCGAAGTGCACGACTCCTTCCAGCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCATCCAGGAGCAGAGCCAGTGCACGGCCCAGGAGGGGCTGGAGCTGCAGCAGAGAGAGCGGGAGGTGACAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGTAGCCAGCAGACACTCTGGCGGCCCGAGGGCACCCAGAGCACGGCCACACTCCGCATCCTGGCCAGCATGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGAGCAGCCGGCCCCTGCTCGGGAACTTTGTCCGCTCCGCCTGGCCCAGCCTCCGCCTGTACGACCTGGAGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGACCCCACGGCCCTGGAGGAGGAGGAGAAGCAGAGCCTCCTGGTGAAGGAGCTCCAGAGCCTGGCAGTGGCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCGGGACCACATGCTTCGCGGGATGCCCTTAAGCCTGGCTGAGAAACGCAGCCTGCGAGAGAAGAGCAGGACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGAGGGGGAAGTGGAGGGGCCAGCCGGGCAGCGGCGGGGTCTGCTCCTGCTGTGGCCGGCTCAGATATGCCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGTGCTGGCCTTGCACAGCCTGGGCCTGGCGCTGCTCTCCGCCCTGCAGGCCCTGATGCCGTGGCGCTACGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGAAGCGCATCGGGGGCCAGTTCGGCTCCAGCGTGCTCTCCTACTTCCTCTTTCTCAAGACCCTGCTGGCTTTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATGCCCTCCTGCTGCTGCTGCTGGTGGCCTTCATCATGGGCCCTCAGGTCGCCTTCCCACCCGCCCTGCCGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTGCCCCCGTCTGCACAGGCCTGGAGCTCCTCACAGGCGCGGGTTGCTTCACCCACACCGTCATGTACTACG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCACTACAGTAACGCCACGCTGAACCAGCCGTGTGGCAGCCCCCTGGATGGCAGCCAGTGCACACCCAGGGTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGTGGCCTGCCCTACAACATGCCCCTGGCCTACCTCTCCACTGTGGGCGTGAGCTTCTTTATCACCTGCATCAC 1258
Query 1 -------------ATGGCTCACTCTTTCGGGGAGAGCTACCGGGTGGGCAGCACCTCTGGCATCCACGCCATCA 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTGGTGTACAGCATGGCTCACTCTTTCGGGGAGAGCTACCGGGTGGGCAGCACCTCTGGCATCCACGCCATCA 1332
Query 62 CCGTCTTCTGCTCCTGGGACTACAAGGTGACGCAGAAGCGGGCCTCCCGCCTCCAGCAGGACAATATTCGCACC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCGTCTTCTGCTCCTGGGACTACAAGGTGACGCAGAAGCGGGCCTCCCGCCTCCAGCAGGACAATATTCGCACC 1406
Query 136 CGGCTGAAGGAGCTGCTGGCCGAGTGGCAGCTGCGGCACAGCCCCAGGAGCGTGTGCGGGAGGCTGCGGCAGGC 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGGCTGAAGGAGCTGCTGGCCGAGTGGCAGCTGCGGCACAGCCCCAGGAGCGTGTGCGGGAGGCTGCGGCAGGC 1480
Query 210 GGCTGTGCTGGGGCTTGTGTGGCTGCTGTGTCTGGGGACCGCGCTGGGCTGCGCCGTGGCCGTCCACGTCTTCT 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGCTGTGCTGGGGCTTGTGTGGCTGCTGTGTCTGGGGACCGCGCTGGGCTGCGCCGTGGCCGTCCACGTCTTCT 1554
Query 284 CGGAGTTCATGATCCAGAGTCCAGAGGCTGCTGGCCAGGAGGCTGTGCTGCTGGTCCTGCCCCTGGTGGTTGGC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CGGAGTTCATGATCCAGAGTCCAGAGGCTGCTGGCCAGGAGGCTGTGCTGCTGGTCCTGCCCCTGGTGGTTGGC 1628
Query 358 CTCCTCAACCTGGGGGCCCCCTACCTGTGCCGTGTCCTGGCCGCCCTGGAGCCGCATGACTCCCCGGTACTGGA 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTCCTCAACCTGGGGGCCCCCTACCTGTGCCGTGTCCTGGCCGCCCTGGAGCCGCATGACTCCCCGGTACTGGA 1702
Query 432 GGTGTACGTGGCCATCTGCAGGAACCTCATCCTCAAGCTGGCCATCCTGGGGACACTGTGCTACCACTGGCTGG 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGTGTACGTGGCCATCTGCAGGAACCTCATCCTCAAGCTGGCCATCCTGGGGACACTGTGCTACCACTGGCTGG 1776
Query 506 GCCGCAGGGTGGGCGTCCTGCAGGGCCAGTGCTGGGAGGATTTTGTGGGCCAGGAGCTGTACCGGTTCCTGGTG 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCCGCAGGGTGGGCGTCCTGCAGGGCCAGTGCTGGGAGGATTTTGTGGGCCAGGAGCTGTACCGGTTCCTGGTG 1850
Query 580 ATGGACTTCGTCCTCATGTTGCTGGACACGCTTTTTGGGGAACTGGTGTGGAGG-------------------- 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATGGACTTCGTCCTCATGTTGCTGGACACGCTTTTTGGGGAACTGGTGTGGAGGATTATCTCCGAGAAGAAGCT 1924
Query 634 -------------------------------------------------------------------------- 633
Sbjct 1925 GAAGAGGAGGCGGAAGCCGGAGTTTGACATTGCCCGGAATGTCCTGGAGCTGATTTATGGGCAGACTCTGACCT 1998
Query 634 -------------------------------------------------------------------------- 633
Sbjct 1999 GGCTGGGGGTGCTCTTCTCGCCCCTCCTCCCCGCCGTGCAGATCATCAAGCTGCTGCTCGTCTTCTATGTCAAG 2072
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2073 AAGACCAGCCTTCTGGCCAACTGCCAGGCGCCGCGCCGGCCCTGGCTGGCCTCACACATGAGCACCGTCTTCCT 2146
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2147 CACGCTGCTCTGCTTCCCCGCCTTCCTGGGCGCCGCTGTCTTCCTCTGCTACGCCGTCTGGCAGGTGAAGCCCT 2220
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2221 CGAGCACCTGCGGCCCCTTCCGGACCCTGGACACCATGTACGAGGCCGGCAGGGTGTGGGTGCGCCACCTGGAG 2294
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2295 GCGGCAGGCCCCAGGGTCTCCTGGCTGCCCTGGGTGCACCGGTACCTGATGGAAAACACCTTCTTTGTCTTCCT 2368
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2369 GGTGTCAGCCCTGCTGCTGGCCGTGATCTACCTCAACATCCAGGTGGTGCGGGGCCAGCGCAAGGTCATCTGCC 2442
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2443 TGCTCAAGGAGCAGATCAGCAATGAGGGTGAGGACAAAATCTTCTTAATCAACAAGCTTCACTCCATCTACGAG 2516
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2517 AGGAAGGAGAGGGAGGAGAGGAGCAGGGTTGGGACAACCGAGGAGGCTGCGGCACCCCCTGCCCTGCTCACAGA 2590
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2591 TGAACAGGATGCCTAGGGGGACGGCGATGGGCCTCACGGGCCCGCCCAGCACCCTGAGACCACACTGTTGCCTC 2664
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2665 CCAGTGACCCTGCTGGGACACCAGGACAAGGAAGACAGTTTCGCCTCTCGAAAGCCGCAGCTGCGCCTAGGCTG 2738
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2739 GAGCTGGAAGGGTCTGCAGGGACCAGCCCATGACAGCCCAGGGCTCCAGGTCTGCGGGGACCAGCCCATCACAG 2812
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2813 CCCAGGGCTCCAGGCCTGCGGGGACCAGCCCGTCAGCCTCAGTTCTCCAGGCCTGCGGGGACCAGCCCGTCATG 2886
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2887 ACCCCAGTGCTCCAGGTCTGTGGGGACCAGCCCGTCAGCCTGTGCTCCAGGCCTGCAGGAACCAGCCCGTCAGC 2960
Query 634 -------------------------------------------------------------------------- 633
Sbjct 2961 CTCAGTGCTCCAGGCCTGCGGGGACCAGCCCGTCAGCCTGTGCTCCAGGCCTGCGGGGACCAGCCCGTCATGAC 3034
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3035 CCCAGTGCTCCAGGTCTGTGGGGACCAGCCCGTCAGCCTGTGCTCCAGGCCTGCGGGAACCAGCCCGTCATGAC 3108
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3109 CCCAGTGCTCCAGGCCTGCGGGGACCAGCCCGTCATGACCCCAGTGCTCCAGGTCTGTGGGGACCAGCCCGTCA 3182
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3183 CGGCGCAGGGTTCCAGGCTTGTGGGGACCAGCCTGTCACAGCCCAGGGCTCCAGGCCTGCAGGAGCTGCGCTTG 3256
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3257 GGATTGGGGGAATGAACCCAGGTGGGGAAATGGTCAAAGAGCGATGGGCCCAGAAAAGGGTCAGACCCAGATGG 3330
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3331 AGATGCCACTGGCTGCTAGCAGACCCCCACGCTGGGTCTAGCCCACCCAATCCCATGGGGATGCTCCTGTGCTC 3404
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3405 TGCAGACATCTGGGTGCTGCCACAGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTC 3478
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3479 TGGGCCTCAGCAAGTAGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATCTTCAGGTGCGAGTGCTGCTG 3552
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3553 GGTGAAGCTGCGTGGGCAGTCCAGAAAGTGACGTGACAGTCCACAGGGACCGACGTAGGGTTTCCAGCCCCTAT 3626
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3627 CTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCTCTCTGGCTGGGGACGTGCGCCTGCCACTGCTGGCTTG 3700
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3701 CCAGCATGATCATTGGTTGTGACCTGTTGAGCCCATCTTGCCAGCCTCACAAAGGACAGTACTAGCTGCTTATG 3774
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3775 ACAGGAAAGTGGAAGAACTTGGCCTGGATATTTCTGGAGAATTACCGTGTGTGCTAGTCAGTCTTTCGTGTCAA 3848
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3849 CCAGGCCAGGCTGTGGGGCCCAGTGATCTCATCGAGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAA 3922
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3923 TGTGGTGAACACCTACAGTCGATTTCACCTAAAGATCATCCTTGAGAATGTGGGTGGGCCTCATCCTATCAGCT 3996
Query 634 -------------------------------------------------------------------------- 633
Sbjct 3997 GAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTGCCTTGAGACGGCGGCTTCCCACTCCCA 4070
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4071 CTGGATGTCCAGCCCGCGGCCCCACGGCTGGGTGAGCCCGTCCTCTCCTCGTTTCTGTCTCCGGACCCACCGTG 4144
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4145 TGGCCCCAGACCCTCCAGTGAGGACCTCCCGTATTTCTTCAGAGCAGCCCTTGCGTGCTGGAGGCCTGGGCTTC 4218
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4219 AGTGTGTCCCTGGGTGCCCTGGGGCATGTTCTGTGACCTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATCAAG 4292
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4293 TGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGAT 4366
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4367 GAGAGCAGCCTAAGATCTACAAACTGTTGTTCGAGTGGATGGGAACTTGATGCTATTTTCAGGCTGAATGACAA 4440
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4441 GACTCCGCGATGCTTCTCGGCCTGGGCTGCACAACGGAATCTACCAGGGAGGTTTTAAAAACACTGGTACTTGC 4514
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4515 TGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGCTCCAGAGGCTGAGGCGGAGGATTGCTTGAGCCCAAGAGT 4588
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4589 TTCGGTTTATTTGCTTTTTCAGAGTCTTGCTCTTGCCCAGGCTGGAGTGCAGTTCCATGATCTCGGCTCACTGC 4662
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4663 CTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCATACAACCAGGCCTGGCTGATCTTCGTATTTTTAGTAGAGA 4736
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4737 TGGGGTTTCACCATGATGGTCAGGCTGGTCAAGATCTCCTGACCTCAAGTGATCTGCCCGCCTCGGCCTCCCAA 4810
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4811 AGTGCTGGGATTACAGACATGAACCACAACACCTGCCGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCA 4884
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4885 AGACCCTGTCCCAACAAACAAAAAAACACTGGTGCCTGAGGCCCACCCCGAGAGATTCTGATTGAGTTGATTTG 4958
Query 634 -------------------------------------------------------------------------- 633
Sbjct 4959 GATTTGAATTATCTTTAAAATTTTGGATGTGAATTTTTTTTTTTTTTCTTGGAATGGAGTTTCACTCTTGTTCC 5032
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5033 CCAGGCTGGAGTGCAACGGGACGATCTTGGCTCACCGCAACCTCCGCCTACTGGGTTCAAGCCATTCTCCTGCC 5106
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5107 TCAGCTTCCCAAGTAGCTGGGATTACAGGCATGTGCTACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGACA 5180
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5181 GGGTTTCTCCATGTTGCTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGCCTCGGACTCCCAAAG 5254
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5255 TGCTGGGATTACAGGCATGAGCCACCATGCCTGGCCGGATGTGAATTATCTTAAAAATTTTCAGGTAATTCTAA 5328
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5329 TGGGCCAAGGTTGAGAACCCCTGCTCTGGGCCCATCCGAGCACCAGGCTGTCACAAACGCATGCATGCACTCAC 5402
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5403 GCCCGTGGGCTTGGGGGGCTTCGGAAATGTGCTTCTGCTTTTTTGAGATGGGGTCTTTCTGTTGCCCATCCCGG 5476
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5477 AGCACAGTGGCACGATCACAGCTCACTGCAGCCTCGACCTCCTGGGCTCAGGTGATCCTCCCGCCTCAGCCTCC 5550
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5551 TGAGTGTCTGCTTCTGGTTTTCATGATGACCTGGGGCCCAGGCATACTACACTTGTGCTGTTCAGGGGCCAGTC 5624
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5625 CTGCACCAGGAGCCCATCAGCCACAGCTCCGCCGAGAAGCACTGATATGCAGAGCTAAGCAGCTTTGTTTCCAC 5698
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5699 GTGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCC 5772
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5773 ACTGTCTCTGTTTTCCCTCTTCACTGAACACTCAGTCGGGGCTCGCCATGATGCCTCTGTGTCTGCTGGCTTCT 5846
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5847 CCCCCATTGGAACAGCCTTCTTGGCACGCCACACTGCTAGCTGCTGGGCACTGTGCTTTCTGCCTTTACCGTTC 5920
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5921 TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCACCTGGCTCATGCCTGTATTCC 5994
Query 634 -------------------------------------------------------------------------- 633
Sbjct 5995 CAGCAGTTCGAGATCAGCCTGGGCAACATGGTGAGACCCTATCTCTACAAAAATAAAAAATGAAATGAGCTGGG 6068
Query 634 -------------------------------------------------------------------------- 633
Sbjct 6069 TGGGGTGGCGCATGCATGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGTCGGAAGATCGCTGGAGCTTAACCT 6142
Query 634 -------------------------------------------------------------------------- 633
Sbjct 6143 TGAGGTCAAGGTTGCAGTGAGCCGAGATTACATCACTGCACTCCAGCGTGGGAGACAGAGACCCTGTATTAACA 6216
Query 634 -------------------------------------------------------------------------- 633
Sbjct 6217 AACAAAAACACAAACCACAAAGGGCAGGTCTGAAACTGCCATTTAAAAAAAAATTTAATAAACTTAAAAAAATA 6290
Query 634 ---------- 633
Sbjct 6291 TATATCCACA 6300
