Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11657
- Subject:
- NM_001112720.3
- Aligned Length:
- 2676
- Identities:
- 474
- Gaps:
- 2202
Alignment
Query 1 ATGGATTCCGAAAGACAAGTCAAGGTTAAGGACACTGATGACATTGAAAGTCCTAAACGCAGTATCCGAGACAG 74
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATTCCGAAAGACAAGTC------AAGGACACTGATGACATTGAAAGTCCTAAACGCAGTATCCGAGACAG 68
Query 75 TGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCAGAGATGATTCCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 TGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCAGAGATGATTCCT 142
Query 149 TCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTCAGGGGAAGCAGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143 TCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTCAGGGGAAGCAGC 216
Query 223 GATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217 GATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTC 290
Query 297 TGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAATC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 TGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAATC 364
Query 371 AGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAGAGCTGGAGTACC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 AGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAGAGCTGGAGTACC 438
Query 445 GCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGG-------------------------------------- 480
||||||||||||||||||||||||||||||||||||
Sbjct 439 GCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGGAGCACCAGCATGTTTGACATGCGGTGTGAGGAGGAGGC 512
Query 481 -------------------------------------------------------------------------- 480
Sbjct 513 CGCGGTGCAGCCGCACAGCAGGGCCCGCCAGGAGCAGCTGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACG 586
Query 481 -------------------------------------------------------------------------- 480
Sbjct 587 ACAAATGGCAAGATGACCTGGCTCGTTGGAAGAGTCGTAGAAGAAGTGTTTCTCAGGACTTAATCAAGAAAGAG 660
Query 481 -------------------------------------------------------------------------- 480
Sbjct 661 GAAGAAAGGAAAAAAATGGAGAAGTTACTGGCTGGAGAAGATGGGACAAGTGAACGAAGGAAAAGCATCAAAAC 734
Query 481 -------------------------------------------------------------------------- 480
Sbjct 735 CTACAGAGAAATTGTTCAAGAAAAAGAGCGGAGAGAGAGAGAGCTGCATGAAGCATATAAGAACGCTCGGTCCC 808
Query 481 -------------------------------------------------------------------------- 480
Sbjct 809 AGGAGGAGGCAGAGGGGATCCTTCAACAGTACATTGAGAGGTTCACCATCAGTGAGGCTGTTCTCGAACGCTTG 882
Query 481 -------------------------------------------------------------------------- 480
Sbjct 883 GAGATGCCAAAAATTCTGGAAAGAAGCCATTCAACAGAGCCAAATTTATCCTCCTTCCTGAATGACCCCAATCC 956
Query 481 -------------------------------------------------------------------------- 480
Sbjct 957 CATGAAATACCTGCGGCAACAGTCACTGCCTCCACCCAAATTCACTGCCACTGTTGAAACCACCATTGCTCGTG 1030
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1031 CCAGTGTTCTGGATACCAGCATGTCAGCAGGCAGTGGGTCTCCAAGCAAAACTGTCACTCCCAAAGCAGTGCCT 1104
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1105 ATGCTGACACCCAAGCCTTACTCCCAGCCCAAAAATTCTCAAGATGTTCTGAAGACCTTTAAGGTAGACGGGAA 1178
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1179 AGTCAGTGTGAATGGAGAGACGGTTCATAGAGAGGAGGAGAAGGAAAGAGAGTGTCCCACGGTGGCACCTGCCC 1252
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1253 ACTCCTTAACCAAATCCCAGATGTTTGAAGGTGTGGCCAGAGTGCACGGGTCTCCACTGGAGCTGAAACAAGAC 1326
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1327 AACGGTAGCATCGAGATCAACATAAAGAAGCCAAACTCTGTTCCCCAAGAGCTCGCAGCAACCACTGAGAAAAC 1400
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1401 GGAACCGAATAGTCAAGAGGACAAGAATGATGGTGGAAAATCAAGAAAAGGGAATATAGAACTTGCCTCATCAG 1474
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1475 AACCACAGCATTTTACAACAACTGTGACTCGATGCAGCCCGACCGTGGCCTTTGTGGAATTTCCCTCCAGCCCC 1548
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1549 CAGCTGAAGAATGATGTGTCGGAAGAAAAAGACCAGAAGAAACCAGAAAATGAAATGAGTGGAAAGGTGGAGTT 1622
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1623 GGTGCTGTCACAAAAGGTGGTAAAGCCAAAATCTCCAGAACCCGAAGCAACGCTGACATTTCCATTTCTGGACA 1696
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1697 AAATGCCTGAAGCCAACCAACTACATTTGCCAAATCTCAATTCTCAAGTGGATTCTCCAAGCAGTGAGAAGTCA 1770
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1771 CCTGTTATGACACCTTTTAAGTTCTGGGCATGGGACCCAGAAGAGGAGCGCAGGCGACAGGAAAAATGGCAACA 1844
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1845 GGAACAGGAACGTTTGCTCCAGGAGAGATACCAGAAGGAGCAGGACAAGCTGAAAGAAGAGTGGGAAAAGGCCC 1918
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1919 AAAAGGAGGTGGAAGAGGAAGAACGCAGATACTATGAGGAGGAGCGTAAGATAATTGAAGACACTGTGGTTCCA 1992
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1993 TTTACTGTTTCTTCAAGTTCCGCTGACCAGCTGTCTACCTCTTCCTCCATGACTGAAGGCAGTGGGACAATGAA 2066
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2067 TAAGATAGACCTGGGAAACTGTCAAGATGAAAAACAAGACAGAAGATGGAAGAAATCATTCCAGGGAGATGACA 2140
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2141 GTGACTTATTGCTGAAGACTAGGGAAAGTGATCGACTGGAGGAGAAGGGCAGCCTAACTGAAGGGGCCTTGGCT 2214
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2215 CATTCTGGGAACCCTGTATCAAAAGGAGTCCATGAAGACCATCAGCTGGATACCGAGGCTGGGGCCCCACACTG 2288
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2289 TGGAACAAACCCACAGCTTGCTCAGGATCCATCCCAGAATCAGCAGACATCAAATCCAACGCACAGTTCAGAAG 2362
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2363 ATGTGAAGCCAAAAACCCTCCCGCTGGATAAAAGCATTAACCATCAGATCGAGTCTCCCAGTGAAAGGCGGAAG 2436
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2437 TCTATAAGTGGAAAGAAGCTGTGCTCTTCCTGTGGGCTTCCTTTGGGTAAAGGAGCTGCAATGATCATCGAGAC 2510
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2511 CCTCAATCTCTATTTTCACATCCAGTGTTTCAGGTGTGGAATTTGTAAAGGCCAGCTTGGAGATGCAGTGAGTG 2584
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2585 GGACGGATGTTAGGATTCGAAATGGTCTCCTGAACTGTAATGATTGCTACATGCGATCCAGAAGTGCCGGGCAG 2658
Query 481 ------------ 480
Sbjct 2659 CCTACAACATTG 2670
