Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11657
- Subject:
- NM_001256122.2
- Aligned Length:
- 2715
- Identities:
- 417
- Gaps:
- 2247
Alignment
Query 1 ATGGATTCCGAAAGACAAGTCAAGGTTAAGGACACTGATGACATTGAAAGTCCTAAACGCAGTATCCGAGACAG 74
||||||.|.||||||| ||||.|||||.||||||||.||.||.||.|||||.|||||||||||
Sbjct 1 ATGGATCCTGAAAGAC------------AGGAGACTGACGACATTGATAGCCCGAAGCGCAGCATCCGAGACAG 62
Query 75 TGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCAGAGATGATTCCT 148
|||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||..|.|||||.||||
Sbjct 63 TGGCTACATCGACTGCTGGGACTCTGAACGCAGCGACTCCCTCTCTCCTCCTCGCCACGGACGGGATGACTCCT 136
Query 149 TCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTCAGGGGAAGCAGC 222
|.||||||||||||||.||||||||.|||||..|||||||.|||||.|||||||||||.||||||||||||||.
Sbjct 137 TTGACAGCCTGGATTCTTTTGGCTCCCGCTCCAGGCAGACACCTTCGCCAGATGTAGTTCTCAGGGGAAGCAGT 210
Query 223 GATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTC 296
|||||.|||||||||||.||||||||.||||||||.||.||||||.||||||||||||||||.|||||.|||||
Sbjct 211 GATGGAAGAGGAAGCGATTCTGAATCAGACTTGCCGCACCGGAAGTTGCCAGATGTGAAGAAAGATGATATGTC 284
Query 297 TGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAATC 370
.|||||..|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 285 CGCACGAAGGACTTCTCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAACC 358
Query 371 AGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAGAGCTGGAGTACC 444
||||||||||||||||.||||||||||||||||||||.||.|||.|.|||||||.|.|.|||||.|||||.|||
Sbjct 359 AGACGGCCTACGTCCCGGCGCCTCTGAGAAAGAAGAAGGCGGAGCGGGAGGAATTCAGGAAGAGTTGGAGCACC 432
Query 445 GCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGG-------------------------------------- 480
|||||||||||.|||||||||||.|||||||||||.
Sbjct 433 GCCACCTCCCCCCTGGGTGGGGAAAGGCCCTTCAGATACGGTCCCAGAACTCCTGTGTCAGATGACGCAGAGAG 506
Query 481 -------------------------------------------------------------------------- 480
Sbjct 507 CACGAGTATGTTTGACATGCGGTGTGAGGAGGAGGCAGCGGTGCTGCCGCACAGCAGGGCCCGCCAGGAGCAGC 580
Query 481 -------------------------------------------------------------------------- 480
Sbjct 581 TGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACGACAAATGGCAAGATGACCTGGCTCGCTGGAAGAGCCGG 654
Query 481 -------------------------------------------------------------------------- 480
Sbjct 655 AGAAGAAGCGCTTCTCAGGACTTGATCAAGAAAGAGGAAGAAAGGAAAAAAATGGAGAAGCTGATGTCTGGGGA 728
Query 481 -------------------------------------------------------------------------- 480
Sbjct 729 AGATGGGACAAGTGAGCGGAGGAAAAGCATCAAAACTTACAGAGAAATCGTCCAAGAAAAAGAGCGGAGAGAGA 802
Query 481 -------------------------------------------------------------------------- 480
Sbjct 803 GGGAACTTCATGAGGCGTACAAGAACGCAAGGTCGCAGGAGGAGGCCGAGGGGATCCTCCAGCAGTACATCGAG 876
Query 481 -------------------------------------------------------------------------- 480
Sbjct 877 AGGTTCACCATCAGTGAGGCTGTCCTCGAACGCTTGGAGATGCCAAAAATCCTGGAAAGAAGCCATTCAACAGA 950
Query 481 -------------------------------------------------------------------------- 480
Sbjct 951 GCCAAACGTGTCCTCCTTCCCAAACGACCCCAGCCCCATGAAGTACCTGCGGCAGCAGTCACTGCCCCCACCCA 1024
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1025 AGTTCACTGCCACGGTTGAGACCACCATAGCTCGCACCAGTGTCCCAGAGAGCATTGCGTCAGCAGGCACTGGG 1098
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1099 TCTCCAAGCAAAATCATCACTCCAAACACAGTGCCTATGCTGACACCCAGGCCTTACTCCCAGCCCAAAAACTC 1172
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1173 TCAAGAGGTTCTGAAGACTTTTAAGGTAGATGGGAAGGTCAGCATGAATGGGGAAATGGCCCCTGGAGATGAGG 1246
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1247 AAGGAAAGGAAAAAGAAGGCCCTGCAGCTGCAGCCCCTGGCCCTTCCTTAACCAAGTCCCAGATGTTTGAAGGT 1320
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1321 GTGGCCACGGTGCACGACTCTCCTGTGCAGGTGAAACAAGGCAGCAACAGCATCGAGATCAACATCAAGAAGCC 1394
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1395 AAATTCTGCTCCCCAGGAACTGACAGCAGCCTCTGAGGAAACTGAATCGAACGGCCAAGAGGATGAAGACGGTG 1468
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1469 AAGAAAGGCCAGGGACAGGGGATTTGGAGCCTGACTCGGCAGAACCCCAGCACTTTACGACAACTGTGACTCGG 1542
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1543 TGCAGCCCAACAGTGGCCTTGGTGGAGTTTTCATCCAACCCGCAGCTGAAGAATGAGGTGCCAGAACAAGGCCA 1616
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1617 GAAGAAGCCAGAAGATGAGATGAGTGGGAAGGTGGAGTTAGTGTTGTCACAGAAGGTGGCAAAGCCAAAATCCC 1690
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1691 CAGAGCCTGAAGCAACCCTGACGTTTCCATTTCTCGACAAAATGCCTGAAACCAACCAACTACATTTGCCAAAT 1764
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1765 CCCAGTTCTCAAGCGGATTCTCCAAGCAGTGAAAAGTCCCCTGGGAGCACACCCTTTAAGTTCTGGGCATGGGA 1838
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1839 CCCAGAAGAGGAGCGCCGGCGACAGGAGAAATGGCAGCAGGAGCAGGAACGTCTGCTGCAGGAGAGGTATCAGA 1912
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1913 AGGAGCAAGACAAGCTGAAGGAGGAGTGGGAAAAGGCCCAGAAGGAGGTCGAAGAAGAAGAACGCAGATACTAC 1986
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1987 GAGGAGGAGCGTAAGATAATTGAAGACACGGTGGTTCCATTCACTATTTCCTCAAGCTCTGCAGACCAACTGTC 2060
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2061 TACGTCCTTGTCTGTAACTGAAGGCAGCGGGACAAGGAATAAGATGGACTTGGAAAACTGCCCAGACAAAGAAA 2134
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2135 ACGAGAGAAGACAGAAGACGCCTTTCCAGGAGAATGACGGTGATTCATTGCTCAAAACTAGAGAAGGTGGTCTG 2208
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2209 CCAGAGGAGCAGAGCCTAACTCCAAGTCCCTCGGCTAACCCTGAAATCTCCGTGTCAAAAGGAATCCATCAGGA 2282
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2283 CCCGCAGCTGGAGGCAGAGGCTGGGGCCCCACACTGTGGTACAAACCCACAGCCAGCTCAGGATCCACCTCGGA 2356
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2357 ATCAACAGATACCAAACCCACCAACATCCACGTCGGAAGATGTGAAGCCCAAAACCTTGGCCCTGGAGAAAACC 2430
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2431 ATCAATCATCAGATGGAGTCTCCGGGGGAAAGGCGGAAGTCTATAAGCGGGAAGAAACTGTGCTCCTCCTGCGG 2504
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2505 GCTCACTTTGGGTAAAGGTGCTGCGATGATCATCGAGACCCTGAATCTCTACTTTCACATTCAGTGTTTCAGGT 2578
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2579 GCGGCATCTGTAAAGGACAGCTCGGAGATGCAGTAAGCGGGACAGACGTCAGGATTCGCAATGGTCTCCTAAAC 2652
Query 481 --------------------------------------------------- 480
Sbjct 2653 TGTACCGACTGCTACATGCGATCCAGAAGTGCCGGCCAGCCTACAACACTG 2703
