Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11657
- Subject:
- NM_001330784.2
- Aligned Length:
- 2940
- Identities:
- 473
- Gaps:
- 2460
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCGCAGAAGTGGATTGAGCAAGTAACTGGCAGAAGTTTTGGTGATAAAGATTTTCGGACAGGTTTAGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGGAATCCTCCTCTGCGAGTTGCTGAATGCTATAAAGCCAGGACTTGTTAAAAAGATCAATAGATTGCCTACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCATTGCAGGACTGGACAATATTATCTTATTCTTGAGAGGTTGTAAAGAGCTCGGCCTTAAAGAATCTCAACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTGACCCGAGTGACCTCCAGGATACATCCAACAGAGTAACAGTCAAGAGCCTTGATTATAGTAGGAAGCTGA 370
Query 1 ----------------------------------------------ATGGA-TTCC-------GAAAGAC---- 16
.||.| .||| |||.|||
Sbjct 371 AAAATGTATTAGTTACCATTTACTGGCTGGGAAAAGCAGCAAACAGCTGCACATCCTACAGCGGAACGACACTA 444
Query 17 ------AAG-----TCAAGGTT-----------------AAGGACACTGATGACATTGAAAGTCCTAAACGCAG 62
||| |.||||.| |||||||||||||||||||||||||||||||||||
Sbjct 445 AACCTGAAGGAGTTTGAAGGATTGTTGGCTCAGATGCGAAAGGACACTGATGACATTGAAAGTCCTAAACGCAG 518
Query 63 TATCCGAGACAGTGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCA 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATCCGAGACAGTGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCA 592
Query 137 GAGATGATTCCTTCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTC 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGATGATTCCTTCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTC 666
Query 211 AGGGGAAGCAGCGATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGGGGAAGCAGCGATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAA 740
Query 285 GGATGACATGTCTGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGA 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGATGACATGTCTGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGA 814
Query 359 ACAAAAGCAATCAGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAG 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACAAAAGCAATCAGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAG 888
Query 433 AGCTGGAGTACCGCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGG-------------------------- 480
|||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 889 AGCTGGAGTACCGCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGATACGGTCCGAGAACTCCTGTGTCTGA 962
Query 481 -------------------------------------------------------------------------- 480
Sbjct 963 TGACGCAGAGAGCACCAGCATGTTTGACATGCGGTGTGAGGAGGAGGCCGCGGTGCAGCCGCACAGCAGGGCCC 1036
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1037 GCCAGGAGCAGCTGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACGACAAATGGCAAGATGACCTGGCTCGT 1110
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1111 TGGAAGAGTCGTAGAAGAAGTGTTTCTCAGGACTTAATCAAGAAAGAGGAAGAAAGGAAAAAAATGGAGAAGTT 1184
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1185 ACTGGCTGGAGAAGATGGGACAAGTGAACGAAGGAAAAGCATCAAAACCTACAGAGAAATTGTTCAAGAAAAAG 1258
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1259 AGCGGAGAGAGAGAGAGCTGCATGAAGCATATAAGAACGCTCGGTCCCAGGAGGAGGCAGAGGGGATCCTTCAA 1332
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1333 CAGTACATTGAGAGGTTCACCATCAGTGAGGCTGTTCTCGAACGCTTGGAGATGCCAAAAATTCTGGAAAGAAG 1406
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1407 CCATTCAACAGAGCCAAATTTATCCTCCTTCCTGAATGACCCCAATCCCATGAAATACCTGCGGCAACAGTCAC 1480
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1481 TGCCTCCACCCAAATTCACTGCCACTGTTGAAACCACCATTGCTCGTGCCAGTGTTCTGGATACCAGCATGTCA 1554
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1555 GCAGGCAGTGGGTCTCCAAGCAAAACTGTCACTCCCAAAGCAGTGCCTATGCTGACACCCAAGCCTTACTCCCA 1628
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1629 GCCCAAAAATTCTCAAGATGTTCTGAAGACCTTTAAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACGGTTC 1702
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1703 ATAGAGAGGAGGAGAAGGAAAGAGAGTGTCCCACGGTGGCACCTGCCCACTCCTTAACCAAATCCCAGATGTTT 1776
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1777 GAAGGTGTGGCCAGAGTGCACGGGTCTCCACTGGAGCTGAAACAAGACAACGGTAGCATCGAGATCAACATAAA 1850
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1851 GAAGCCAAACTCTGTTCCCCAAGAGCTCGCAGCAACCACTGAGAAAACGGAACCGAATAGTCAAGAGGACAAGA 1924
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1925 ATGATGGTGGAAAATCAAGAAAAGGGAATATAGAACTTGCCTCATCAGAACCACAGCATTTTACAACAACTGTG 1998
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1999 ACTCGATGCAGCCCGACCGTGGCCTTTGTGGAATTTCCCTCCAGCCCCCAGCTGAAGAATGATGTGTCGGAAGA 2072
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2073 AAAAGACCAGAAGAAACCAGAAAATGAAATGAGTGGAAAGGTGGAGTTGGTGCTGTCACAAAAGGAGAGATACC 2146
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2147 AGAAGGAGCAGGACAAGCTGAAAGAAGAGTGGGAAAAGGCCCAAAAGGAGGTGGAAGAGGAAGAACGCAGATAC 2220
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2221 TATGAGGAGGAGCGTAAGATAATTGAAGACACTGTGGTTCCATTTACTGTTTCTTCAAGTTCCGCTGACCAGCT 2294
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2295 GTCTACCTCTTCCTCCATGACTGAAGGCAGTGGGACAATGAATAAGATAGACCTGGGAAACTGTCAAGATGAAA 2368
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2369 AACAAGACAGAAGATGGAAGAAATCATTCCAGGGAGATGACAGTGACTTATTGCTGAAGACTAGGGAAAGTGAT 2442
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2443 CGACTGGAGGAGAAGGGCAGCCTAACTGAAGGGGCCTTGGCTCATTCTGGGAACCCTGTATCAAAAGGAGTCCA 2516
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2517 TGAAGACCATCAGCTGGATACCGAGGCTGGGGCCCCACACTGTGGAACAAACCCACAGCTTGCTCAGGATCCAT 2590
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2591 CCCAGAATCAGCAGACATCAAATCCAACGCACAGTTCAGAAGATGTGAAGCCAAAAACCCTCCCGCTGGATAAA 2664
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2665 AGCATTAACCATCAGATCGAGTCTCCCAGTGAAAGGCGGAAGTCTATAAGTGGAAAGAAGCTGTGCTCTTCCTG 2738
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2739 TGGGCTTCCTTTGGGTAAAGGAGCTGCAATGATCATCGAGACCCTCAATCTCTATTTTCACATCCAGTGTTTCA 2812
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2813 GGTGTGGAATTTGTAAAGGCCAGCTTGGAGATGCAGTGAGTGGGACGGATGTTAGGATTCGAAATGGTCTCCTG 2886
Query 481 ------------------------------------------------------ 480
Sbjct 2887 AACTGTAATGATTGCTACATGCGATCCAGAAGTGCCGGGCAGCCTACAACATTG 2940
