Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11661
- Subject:
- XM_005259521.4
- Aligned Length:
- 3428
- Identities:
- 1264
- Gaps:
- 2122
Alignment
Query 1 ATGGGGTCTGAGGACCACGGCGCCCAGAACCCCAGCTGTAAAATCATGACGTTTCGCCCAACCATGGAAGAATT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGGTCTGAGGACCACGGCGCCCAGAACCCCAGCTGTAAAATCATGACGTTTCGCCCAACCATGGAAGAATT 74
Query 75 TAAAGACTTCAACAAATACGTGGCCTACATAGAGTCGCAGGGAGCCCACCGGGCGGGCCTGGCCAAGATCATCC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TAAAGACTTCAACAAATACGTGGCCTACATAGAGTCGCAGGGAGCCCACCGGGCGGGCCTGGCCAAGATCATCC 148
Query 149 CCCCGAAGGAGTGGAAGCCGCGGCAGACGTATGATGACATCGACGACGTGGTGATCCCGGCGCCCATCCAGCAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCCGAAGGAGTGGAAGCCGCGGCAGACGTATGATGACATCGACGACGTGGTGATCCCGGCGCCCATCCAGCAG 222
Query 223 GTGGTGACGGGCCAGTCGGGCCTCTTCACGCAGTACAATATCCAGAAGAAGGCCATGACAGTGGGCGAGTACCG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGGTGACGGGCCAGTCGGGCCTCTTCACGCAGTACAATATCCAGAAGAAGGCCATGACAGTGGGCGAGTACCG 296
Query 297 CCGCCTGGCCAACAGCGAGAAGTACTGTACCCCGCGGCACCAGGACTTTGACGACCTTGAACGCAAATACTGGA 370
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 297 CCGCCTGGCCAACAGCGAGAAGTACTGTACCCCGCGGCACCAGGACTTTGATGACCTTGAACGCAAATACTGGA 370
Query 371 AGAACCTCACCTTTGTCTCCCCGATCTACGGGGCTGACATCAGCGGCTCTTTGTATGATGACGACGTGGCCCAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAACCTCACCTTTGTCTCCCCGATCTACGGGGCTGACATCAGCGGCTCTTTGTATGATGACGACGTGGCCCAG 444
Query 445 TGGAACATCGGGAGCCTCCGGACCATCCTGGACATGGTGGAGCGCGAGTGCGGCACCATCATCGAGGGCGTGAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAACATCGGGAGCCTCCGGACCATCCTGGACATGGTGGAGCGCGAGTGCGGCACCATCATCGAGGGCGTGAA 518
Query 519 CACGCCCTACCTGTACTTCGGCATGTGGAAGACCACCTTCGCCTGGCACACCGAGGACATGGACCTGTACAGCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACGCCCTACCTGTACTTCGGCATGTGGAAGACCACCTTCGCCTGGCACACCGAGGACATGGACCTGTACAGCA 592
Query 593 TCAACTACCTGCACTTTGGGGAGCCTAAGTCCTGGTACGCCATCCCACCAGAGCACGGCAAGCGCCTGGAGCGG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAACTACCTGCACTTTGGGGAGCCTAAGTCCTGGTACGCCATCCCACCAGAGCACGGCAAGCGCCTGGAGCGG 666
Query 667 CTGGCCATCGGCTTCTTCCCCGGGAGCTCGCAGGGCTGCGACGCCTTCCTGCGGCATAAGATGACCCTCATCTC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGGCCATCGGCTTCTTCCCCGGGAGCTCGCAGGGCTGCGACGCCTTCCTGCGGCATAAGATGACCCTCATCTC 740
Query 741 GCCCATCATCCTGAAGAAGTACGGGATCCCCTTCAGCCGGATCACGCAGGAGGCCGGGGAATTCATGATCACAT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCCCATCATCCTGAAGAAGTACGGGATCCCCTTCAGCCGGATCACGCAGGAGGCCGGGGAATTCATGATCACAT 814
Query 815 TTCCCTACGGCTACCACGCCGGCTTCAATCACGGGTTCAACTGCGCAGAATCTACCAACTTCGCCACCCTGCGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCCCTACGGCTACCACGCCGGCTTCAATCACGGGTTCAACTGCGCAGAATCTACCAACTTCGCCACCCTGCGG 888
Query 889 TGGATTGACTACGGCAAAGTGGCCACTCAGTGCACGTGCCGGAAGGACATGGTCAAGATCTCCATGGACGTGTT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGGATTGACTACGGCAAAGTGGCCACTCAGTGCACGTGCCGGAAGGACATGGTCAAGATCTCCATGGACGTGTT 962
Query 963 CGTGCGCATCCTGCAGCCCGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGTGCGCATCCTGCAGCCCGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGC 1036
Query 1037 GGCCCACGGCGCTCACCAGCCCCGAGCTGAGCTCCTGGAGTGCGTCCCGGGCCTCGCTGAAGGCCAAGCTCCTC 1110
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1037 GGCCCACGGCGCTCACCAGCCCCGAGCTGAGCTCCTGGAGTGCATCCCGGGCCTCGCTGAAGGCCAAGCTCCTC 1110
Query 1111 CGCAGAACCCCTCC--------CTGCGTATCGCCGCACAGACCCTCCCAGCCAGGTATCTGGTGTCCGCCT--G 1174
|||||| | ||| |.||| ...|||.|| ||||.|...|.|| |
Sbjct 1111 CGCAGA-------CAAATTAGTCTG-----------AAAGA---AAACAGACA-----CTGGAGAAAGACTGAG 1158
Query 1175 GAGGAGAGGCCAAAGCA--TCT---------------GCAGCC-------TCTTGGCT----TCT--------- 1211
||||||||| |||.|| ||| ||||.| .|..|||| |||
Sbjct 1159 GAGGAGAGG--AAACCAAGTCTAGAAAGGAAGAAAGAGCAGACCAAAAGGCCGGGGCTGTCGTCTCACCGGAAA 1230
Query 1212 ------------------------------GACCACAA------------------------------------ 1219
||||.|||
Sbjct 1231 CGGAGCCAGCCCAAGAAGCCGAAGCCCGAAGACCCCAAGTTCCCTGGGGAGGGTACGGCTGGGGCAGCGCTCCT 1304
Query 1220 ----GAGGCCATGGGGACA---------CGGAGGCAGGTCCCGG---------CCTAGGAGGAG---------- 1261
||||| |||||.|| .||||||.|| .|||| ||.||||||||
Sbjct 1305 AGAGGAGGC--TGGGGGCAGCGTGAAGGAGGAGGCTGG-GCCGGAGGTTGACCCCGAGGAGGAGGAGGAGGAGC 1375
Query 1262 ---ATCCACTTC------------ATGCCCAGAGTG-----------------------------------AAG 1285
|.|||||.| |.|||.||.|.| |||
Sbjct 1376 CGCAGCCACTGCCACACGGCCGGGAGGCCGAGGGCGCAGAAGAGGACGGGAGGGGCAAGCTGCGGCCAACCAAG 1449
Query 1286 GCCA--------------------------GGCCTCCTGTGTCTCGACGTCT--CGACTCCGCATGGCAACTCA 1331
|||| |||||.| ||.|.|.||..|| ||.|.||||.|| ||||
Sbjct 1450 GCCAAGAGCGAGCGGAAGAAGAAGAGCTTCGGCCTGC--TGCCCCCACAGCTGCCGCCCCCGCCTG----CTCA 1517
Query 1332 AGACCCTTGCAGA------------------------------------------------------------- 1344
...|||.| ||||
Sbjct 1518 CTTCCCCT-CAGAGGAGGCGCTGTGGCTGCCATCCCCACTGGAGCCCCCGGTGCTGGGCCCAGGCCCTGCAGCC 1590
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1591 ATGGAGGAGAGCCCCCTGCCGGCACCCCTTAATGTCGTGCCCCCTGAGGTGCCCAGTGAGGAGCTAGAGGCCAA 1664
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1665 GCCTCGGCCCATCATCCCCATGCTGTACGTGGTGCCGCGGCCGGGCAAGGCAGCCTTCAACCAGGAGCACGTGT 1738
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1739 CCTGCCAGCAGGCCTTTGAGCACTTTGCCCAGAAGGGTCCGACCTGGAAGGAACCAGTTTCCCCCATGGAGCTG 1812
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1813 ACGGGGCCAGAGGACGGTGCAGCCAGCAGTGGGGCAGGTCGCATGGAGACCAAAGCCCGGGCCGGAGAGGGGCA 1886
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1887 GGCACCGTCCACATTTTCCAAATTGAAGATGGAGATCAAGAAGAGCCGGCGCCATCCCCTGGGCCGGCCGCCCA 1960
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1961 CCCGGTCCCCACTGTCGGTGGTGAAGCAGGAGGCCTCAAGTGACGAGGAGGCATCCCCTTTCTCCGGGGAGGAA 2034
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2035 GATGTGAGTGACCCGGACGCCTTGAGGCCGCTGCTGTCTCTGCAGTGGAAGAACAGGGCGGCCAGCTTCCAGGC 2108
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2109 CGAGAGGAAGTTCAACGCAGCGGCTGCGCGCACGGAGCCCTACTGCGCCATCTGCACGCTCTTCTACCCCTACT 2182
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2183 GCCAGGCCCTACAGACTGAGAAGGAGGCACCCATAGCCTCCCTCGGAGAGGGCTGCCCGGCCACATTACCCTCC 2256
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2257 AAAAGCCGTCAGAAGACCCGACCGCTCATCCCTGAGATGTGCTTCACCTCTGGCGGTGAGAACACGGAGCCGCT 2330
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2331 GCCTGCCAACTCCTACATCGGCGACGACGGGACCAGCCCCCTGATCGCCTGCGGCAAGTGCTGCCTGCAGGTCC 2404
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2405 ATGCCAGTTGCTATGGCATCCGTCCCGAGCTGGTCAATGAAGGCTGGACGTGTTCCCGGTGCGCGGCCCACGCC 2478
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2479 TGGACTGCGGAGTGCTGCCTGTGCAACCTGCGAGGAGGTGCGCTGCAGATGACCACCGATAGGAGGTGGATCCA 2552
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2553 CGTGATCTGTGCCATCGCAGTCCCCGAGGCGCGCTTCCTGAACGTGATTGAGCGCCACCCTGTGGACATCAGCG 2626
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2627 CCATCCCCGAGCAGCGGTGGAAGCTGAAATGCGTGTACTGCCGGAAGCGGATGAAGAAGGTGTCAGGTGCCTGT 2700
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2701 ATCCAGTGCTCCTACGAGCACTGCTCCACGTCCTTCCACGTGACCTGCGCCCACGCCGCAGGCGTGCTCATGGA 2774
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2775 GCCGGACGACTGGCCCTATGTGGTCTCCATCACCTGCCTCAAGCACAAGTCGGGGGGTCACGCTGTCCAACTCC 2848
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2849 TGAGGGCCGTGTCCCTAGGCCAGGTGGTCATCACCAAGAACCGCAACGGGCTGTACTACCGCTGTCGCGTCATC 2922
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2923 GGTGCCGCCTCGCAGACCTGCTACGAAGTGAACTTCGACGATGGCTCCTACAGCGACAACCTGTACCCTGAGAG 2996
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2997 CATCACGAGTAGGGACTGTGTCCAGCTGGGACCCCCTTCCGAGGGGGAGCTGGTGGAGCTCCGGTGGACTGACG 3070
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 3071 GCAACCTCTACAAGGCCAAGTTCATCTCCTCCGTCACCAGCCACATCTACCAGGTGGAGTTTGAGGACGGGTCC 3144
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 3145 CAGCTGACGGTGAAGCGTGGGGACATCTTCACCCTGGAGGAGGAGCTGCCCAAGAGGGTCCGCTCTCGGCTGTC 3218
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 3219 ACTGAGCACGGGGGCACCGCAGGAGCCCGCCTTCTCGGGGGAGGAGGCCAAGGCCGCCAAGCGCCCGCGTGTGG 3292
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 3293 GCACCCCGCTTGCCACGGAGGACTCCGGGCGGAGCCAGGACTACGTGGCCTTCGTGGAGAGCCTCCTGCAGGTG 3366
Query 1345 ------------------------ 1344
Sbjct 3367 CAGGGCCGGCCCGGAGCCCCCTTC 3390
