Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11662
- Subject:
- NM_001037221.2
- Aligned Length:
- 2138
- Identities:
- 687
- Gaps:
- 1402
Alignment
Query 1 ATGATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGC 74
Query 75 GCTGCTGTCGCTGCTCAAGCGCGTGAGCCAGACCCAGGCCCGCTTCCTCCAGCTCTGCCTGGAGCACTCGCTGG 148
.|||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 75 ACTGCTGTCGCTGCTCAAGCGCGTAAGCCAGACCCAGGCCCGCTTCCTTCAGCTCTGCCTGGAGCACTCGCTGG 148
Query 149 CCGACTGCGCCGAGCTGCACGTCCTCGAACGCGAGGCCAACAGCCCCGGAATCATTAACCAATGGCAACAGGAA 222
|||||||||||||||||||||||||.|||.|.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 149 CCGACTGCGCCGAGCTGCACGTCCTGGAAGGAGAGGCCAACAGCCCGGGAATCATTAACCAATGGCAACAGGAA 222
Query 223 TCCAAGGATAAAGTGATTTCCCTCCTGTTAACTCATCTGCCTTTGCTGAAGCCAGGAAACCTCGACGCGAAAGT 296
|||||||||||||||||||||||.|||.|||||||.|||||||||||||||||||||||||||||||||||||.
Sbjct 223 TCCAAGGATAAAGTGATTTCCCTTCTGCTAACTCACCTGCCTTTGCTGAAGCCAGGAAACCTCGACGCGAAAGC 296
Query 297 AGAATATATGAAACTGCTGCCCAAAACCCTGGCTCACTCTATTGAACACAACCAGCACATTGAGGAGAGCAGGC 370
|||.||||||||||||||||||||.|.||||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 297 AGAGTATATGAAACTGCTGCCCAAGATCCTGGCACACTCTATCGAACACAACCAGCACATTGAGGAGAGCAGGC 370
Query 371 AGCTGCTGTCCTATGCTTTGATACATCCAGCCACTTCGTTAGAAGACCGTAGTGCTTTAGCCATGTGGCTGAAT 444
||||||||||||||||||||||.||.|||||||||||.||.||||||||.||.||..|||||||||||||||||
Sbjct 371 AGCTGCTGTCCTATGCTTTGATCCACCCAGCCACTTCCTTGGAAGACCGCAGCGCACTAGCCATGTGGCTGAAT 444
Query 445 CACTTGGAGGACCGCACGTCGACCAGCTTTGGTGGCCAGAACCGAGGCCGCTCAGACTCTGTGGATTATGGACA 518
|||||||||||||||||.||.||||||||||||.|||||||||||||||||||.||||||||||||||||||||
Sbjct 445 CACTTGGAGGACCGCACATCCACCAGCTTTGGTAGCCAGAACCGAGGCCGCTCGGACTCTGTGGATTATGGACA 518
Query 519 GACACACTACTATCACCAAAGACAGAACTCTGATGACAAGCTCAATGGGTGGCAGAACTCTCGGGATTCTGGGA 592
|||.||.||||||||||||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||||
Sbjct 519 GACGCATTACTATCACCAAAGACAGAACTCTGACGATAAGCTCAATGGCTGGCAGAACTCTCGGGATTCTGGGA 592
Query 593 TTTGCATCAATGCCTCCAACTGGCAGGACAAAAGCATGGGGTGTGAGAATGGCCATGTGCCCCTCTACTCCTCC 666
|||||||||.|||||||||||||||||||||.|||.||||.|||||||||||||||||||||||||||||.|||
Sbjct 593 TTTGCATCAGTGCCTCCAACTGGCAGGACAAGAGCCTGGGCTGTGAGAATGGCCATGTGCCCCTCTACTCTTCC 666
Query 667 TCATCTGTCCCCACCACAATCAATACGATTGGAACCAGCACAAGTACAAGTAAGTTC-------CCCGG----- 728
||.||||||||..||||||||||.||||||||||||.||.||||.||.| ||| ||.||
Sbjct 667 TCGTCTGTCCCTGCCACAATCAACACGATTGGAACCGGCGCAAGCACGA-----TTCTCTCAGGCCAGGCACAC 735
Query 729 --AATCCCTTT--AACG--------------------------------------------------------- 741
.|.|||||| ||||
Sbjct 736 CACAGCCCTTTGAAACGATCTGTGTCCCTTACCCCACCCATGAATGTGCCAAACCAGCCTCTAGGACATGGATG 809
Query 742 -------------------------------------------------------------------------- 741
Sbjct 810 GATGTCTCATGAGGACTTACGAGCTAGAGGACCTCAGTGCCTCCCATCCGATCATGCCCCCCTGTCTCCACAAA 883
Query 742 -------------------------------------------------------------------------- 741
Sbjct 884 GCAGTGTAGCCTCTTCAGGAAGTGGTGGGAGTGAACACTTAGAAGATCAGACCACTGCTCGTAACACATTCCAA 957
Query 742 -------------------------------------------------------------------------- 741
Sbjct 958 GAAGAAGGTAGTGGTATGAAAGATGTTCCAGCTTGGTTAAAAAGCCTCCGCCTGCACAAGTACGCTGCGCTCTT 1031
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1032 CTCGCAGATGACTTATGAGGAAATGATGGCCCTCACTGAGTGTCAACTGGAGGCTCAGAATGTTACCAAAGGCG 1105
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1106 CAAGACACAAAATTGTAATCAGTATTCAGAAGCTCAAAGAAAGACAGAACCTCCTGAAGTCTTTGGAAAGGGAC 1179
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1180 ATCATCGAAGGGGGCAGCCTGCGCACCCCCCTCCAGGAGCTACATCAGATGATCCTGACACCCATCAAGGCCTA 1253
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1254 CAGCTCTCCCAGTACCACCCCTGAGGTGCGCTGCCGGGAGCCCTCACTGATGGAGAGCCCAAGCCCTGACTGCA 1327
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1328 AAGACAGCGCTGCAGCAGTCACCAGCGCCACAGCCAGTGCCTCAGCCGGTGCCAGCGGTGGACTGCAACCACCC 1401
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1402 CAGCTGAGCAGCTGCGACGGAGAGCTGGCTGTCGCCCCTCTGCCGGAGGGGGACCTCCCGGGGCAGTTCACCCG 1475
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1476 AGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCCGATGAAGAAAATATAAGCTCCTATCTACAGC 1549
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1550 TCTTAGACAAGTGTCTTGTTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAG 1623
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1624 GTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCG 1697
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1698 TGGCTTTGGGCAGTCCAACTCCCTCCCAACAGCCAGCTCTGTGGGCAGCGGCATGGGCAGACGGAACCCACGAC 1771
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1772 AGTACCAGATCGCATCTCGGAATGTCCCTTCCGCCCGCCTTGGTCTCCTGGGCACCAGTGGATTTGTCAGCTCC 1845
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1846 AACCAGCGCCACACCGCTGCCAACCCCACCATCATGAAACAAGGAAGACAGAACCTCTGGTTTGCCAACCCTGG 1919
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1920 GGGCAGCAACAGCATGCCCAGCCGCACCCACAGCTCCGTCCAGAAGACCCGCTCGCTGCCCGTGCATACTTCCC 1993
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1994 CACAAAACATGCTGATGTTCCAGCAACCAGAATTTCAGCTTCCTGTGACTGAACCTGACATCAACAATAGGCTG 2067
Query 742 ------------------------------------------------------------------ 741
Sbjct 2068 GAGTCCTTGTGCCTCAGTATGACGGAGCATGCCCTGGGAGACGGGGTTGACCGGACCTCCACAATC 2133
