Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11674
- Subject:
- XM_006538592.3
- Aligned Length:
- 5370
- Identities:
- 1546
- Gaps:
- 3633
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGGGAGCCTCTGTGAAGGTCGCTGTTCGAGTGAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAGTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAACCCAAAGGAAGCACCAAAGTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGCTTTGACTACTCCTACTGGTCCCACACCTCGCCTGAAGATCCCTGTTTTGCATCGCAGAATCGTGTGTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGACATTGGAAAGGAAATGCTCTTACATGCCTTTGAAGGTTATAATGTCTGTATCTTTGCCTATGGGCAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGCTGGGAAATCCTACACGATGATGGGGAAACAAGAAGAGAGCCAAGCTGGAATCATCCCACAGTTGTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAACTCTTTGAGAAGATCAATGACAATTGTAATGAAGAAATGTCTTACTCTGTAGAGGTGAGCTACATGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTACTGTGAGAGAGTACGAGATTTACTGAATCCCAAAAACAAGGGTAACTTGCGTGTGCGTGAACACCCGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGACCCTATGTGGAGGATCTGTCCAAGCTGGCGGTCACCTCCTACACTGACATCGCTGACCTGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGGAACAAAGCCAGGACTGTGGCAGCTACCAACATGAATGAGACAAGCAGCCGTTCTCACGCTGTGTTCACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGTCTTTACCCAGAAGAAACAGGATCCTGAGACGAACCTTTCTACTGAGAAGGTCAGTAAAATCAGCTTGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATCTAGCAGGAAGTGAACGGGCTGATTCAACTGGTGCCAAAGGAACTCGATTAAAGGAAGGTGCAAATATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATAAGTCCCTTACAACTTTGGGCAAAGTCATTTCGGCCTTGGCAGAGGTGGATAACTGCACAAGCAAGAGTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAAGAAGAAAACTGATTTTATTCCTTATAGGGATTCTGTACTTACTTGGCTCCTTCGAGAAAATCTCGGTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAACTCCCGAACTGCAATGGTTGCTGCTCTGAGCCCAGCCGACATCAACTACGATGAAACTTTGAGCACACTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATACGCAGATCGTGCAAAACAAATTAAATGCAATGCTGTTATCAATGAGGACCCGAATGCCAAGCTGGTTCGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGTTGAAGGAGGAAGTGACCCGACTGAAGGACCTTCTTCGTGCTCAGGGACTGGGAGATATTATTGATATTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCATTGATCGATGATTACTCTGGAAGTGGAGGCAAATCATCCATGGGGTCCCTCACTTCATCTCCATCTTCAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCTCACTTAATAGTCAGGTGGGCTTAACATCTGTGACCAGTATTCAGGAGAGGATCATGTCTACACCTGGAGGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGGAAGCCATTGAACGTCTGAAGGAGTCAGAGAAGATCATTGCTGAGTTGAATGAAACCTGGGAAGAGAAACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCGTAAAACAGAGGCCATCAGAATGGAGAGAGAAGCCTTGTTGGCTGAGATGGGAGTTGCCATACGGGAAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGGGACACTTGGAGTTTTCTCTCCTAAAAAGACCCCACATCTTGTTAACCTCAATGAAGACCCATTAATGTCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGTGTTTGCTCTATTACATCAAGGATGGAATTACAAGGGTTGGCCAGGCAGATGCTGAGCGGCGCCAGGACAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGTGCTGAGTGGGGCCCACATTAAAGAGGAGCATTGTCTCTTTCGGAGTGAGAGGAGCAACACTGGTGAAGTTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGTGACCTTGGAGCCCTGTGAGCGCTCAGAAACATACGTGAATGGCAAGAGGGTGGCTCATCCTGTTCAGCTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGCTCAGGGAACCGTATCATCATGGGTAAAAACCATGTTTTTCGTTTTAACCACCCTGAACAAGCGCGAGCAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAGGGAAAAGACTCCCTCAGCTGAGACCCCCTCTGAGCCTGTGGACTGGACCTTTGCTCAGAGAGAGCTTCTCG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAAACAAGGAATTGATATGAAACAGGAGATGGAAAAGAGGCTTCAGGAAATGGAGATCCTTTACAAAAAGGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAGGAGGAAGCCGATCTTCTCCTGGAGCAGCAGAGACTGGACTACGAGAGTAAATTGCAGGCCTTGCAGAGGCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTTGAGACTCGATCTCTGGCTGCAGAGACAACGGAAGAGGAGGAAGAGGAGGAGGAAGTTCCTTGGACACAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGAATTTGAGTTGGCCCAGTGGGCGTTCCGGAAATGGAAGTCTCACCAGTTTACTTCATTAAGGGACTTACTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGGGCAATGCGGTGTACCTGAAGGAAGCCAATGCCATCAGTGTGGAACTAAAGAAAAAGGTGCAGTTCCAGTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGTTCTGCTGACTGACACGCTGTACTCCCCTGTGCCTCCTGAACTGCTTCCCTCGGAGATGGAGAAGACGCACG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGACAGACCTTTCCCTCGGACTGTGGTGGCGGTGGAGGTCCAGGATCTGAAGAATGGAGCAACACATTATTGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCTTTGGATAAACTCAAGCAGAGACTGGATCTGATGCGAGAGATGTATGACAGGGCAGGGGAGGTGGCCTCCAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGCCCAAGATGACAGCGAGACGACCATGACCGGCAGCGACCCATTCTACGATCGGTTCCACTGGTTCAAACTTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGGAAGCTCCCCTATTTTCCACGGCTGTGTGAATGAGCGCCTTGCCGACCGCACACCCTCCCCCACTTTTTCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACGGCCGATTCCGACATCACTGAACTGGCTGACGAGCAGCAGGATGCCATGGAGGACTTTGATGATGAGGCATT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CGTGGATGACACCGGCTCTGACGCAGGGACGGAAGAGGGATCAGAGCTCTTCAGTGATGGGCATGACCCATTTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACGACCGATCCCCTTGGTTCATTTTAGTAGGAAGGGCATTTGTGTACTTGAGCAACCTGCTGTATCCGGTGCCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTGATTCACAGGGTGGCCATTGTCAGTGAGAAGGGGGAAGTCCGGGGATTTCTTCGTGTGGCTGTGCAGGCCAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGCAGCGGATGAAGAAGCCCCTGATTATGGCTCTGGAATCCGGCAGTCGGGAACAGCTAAAATATCTTTTGATA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGAATACTTTAATCAGAGTGACTTCTCGTCAGCTGCAATGACTCGTTCTGGTCTGTCCTTGGAGGAGCTGAGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATTGTGGAAGGTCAGGGCCAGAGTTCTGAAGTCATCAGTCCTCCAGAAGAAGTCAATCGAATGAACGACCTGGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTTGAAGTCAGGCACTTTGCTGGATGGGAAGATGGTGATGGAAGGGTTTTCTGAAGAGATTGGTAACCACCTGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGCTGGGCAGTGCCTTCACTTTCCGAGTCACTGTGCTCCAAGCCAGCGGGATCCTTCCAGAGTATGCAGACATC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTCTGTCAGTTCAACTTTTTGCATCGGCATGATGAAGCGTTCTCCACTGAACCCCTCAAGAACAATGGAAGAGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAGTCCCCTGGGCTTCTACCATGTACAGAACATTGCGGTGGAGGTCACAGAGTCGTTTGTGGACTACATCAAAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCAAGCCCATTGTATTCGAGGTCTTTGGGCACTACCAGCAGCACCCACTCCATCTGCAAGGACAAGATCTTAAC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGTCCACCTCAGCCATCTCGGAGATTCTTCCCCCCACCCATGCCACTCTCCAAGCCAGTTCCAGCTACTAAGTT 3626
Query 1 -------ATGAGCAAAACCAGCCTTGGCCAGAGCATGAGCAAGTATGACCTCCTGGTTTGGTTTGAGATCAGTG 67
||||.||||||||.||||||.||.||||||||||||||.|||||.||||||||||||||||||||||
Sbjct 3627 AAACACCATGAACAAAACCACCCTTGGGCAAAGCATGAGCAAGTACGACCTTCTGGTTTGGTTTGAGATCAGTG 3700
Query 68 AACTGGAGCCTACAGGAGAGTATATCCCAGCTGTGGTTGACCACACAGCAGGCTTGCCTTGCCAGGGGACATTT 141
|||||||||||||.|||||||||||.|||||||||||||||||.||.||||||.||||.|||||||||||||||
Sbjct 3701 AACTGGAGCCTACTGGAGAGTATATTCCAGCTGTGGTTGACCATACTGCAGGCCTGCCCTGCCAGGGGACATTT 3774
Query 142 TTGCTTCATCAGGGCATCCAGCGAAGGATCACAGTGACCATTATCCATGAGAAGGGGAGCGAGCTCCATTGGAA 215
|||||.||.|||||||||||||||.|||||||||||||.||.|||||.||||||||.||.||||||||.|||||
Sbjct 3775 TTGCTGCACCAGGGCATCCAGCGACGGATCACAGTGACTATCATCCACGAGAAGGGCAGTGAGCTCCACTGGAA 3848
Query 216 AGATGTTCGTGAACTGGTGGTAGGTCGTATTCGGAATAAGCCTGAGGTGGATGAAGCTGCAGTTGATGCCATCC 289
||||||.|||||.||||||||||||||.|||.|||||||.||.|||||.||||||||||||||||||||..|.|
Sbjct 3849 AGATGTCCGTGAGCTGGTGGTAGGTCGGATTAGGAATAAACCGGAGGTAGATGAAGCTGCAGTTGATGCTGTTC 3922
Query 290 TCTCCCTAAATATTATTTCTGCCAAGTACCTGAAGTCTTCCCACAACTCTAGCAGGACCTTCTACCGCTTTGAG 363
|.|||||.||.||.||.|||||.||||.|||||||.||.||||||.|||.|||||||||||||||||.||.|||
Sbjct 3923 TTTCCCTGAACATCATCTCTGCTAAGTCCCTGAAGGCTGCCCACAGCTCCAGCAGGACCTTCTACCGTTTCGAG 3996
Query 364 GCTGTGTGGGATAGCTCTCTGCATAACTCCCTTCTTCTGAACCGAGTGACACCCTATGGAGAAAAGATCTACAT 437
||.||.|||||.|||||.||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GCAGTATGGGACAGCTCCCTACATAACTCCCTCCTTCTGAACCGAGTGACACCCTATGGAGAAAAGATCTACAT 4070
Query 438 GACCTTGTCGGCCTACCTAGAGCTGGATCATTGCATCCAGCCGGCTGTCATCACCAAGGATGTGTGCATGGTCT 511
||||||.||.||.||.||.|||.||||||||||||||||||||||.||||||||.|||||||||||||||||||
Sbjct 4071 GACCTTATCTGCTTATCTGGAGTTGGATCATTGCATCCAGCCGGCCGTCATCACTAAGGATGTGTGCATGGTCT 4144
Query 512 TCTACTCCCGAGATGCCAAGATCTCACCACCACGCTCTCTGCGTAGCCTCTTTGGCAGCGGCTACTCAAAGTCA 585
||||.||||||||||||||||||||||||||.||.||||||||.|.|||||||||.||.|||||||||||||||
Sbjct 4145 TCTATTCCCGAGATGCCAAGATCTCACCACCGCGTTCTCTGCGAAACCTCTTTGGTAGTGGCTACTCAAAGTCA 4218
Query 586 CCAGATTCGAATCGAGTCACTGGCATTTACGAACTCAGCTTATGCAAAATGTCAGACACAGGTAGTCCAGGTAT 659
|||||.||.||.|||||.|||||.||.||.||.||.|||||||||||||||.||||.||.||.||.|||||.||
Sbjct 4219 CCAGACTCCAACCGAGTGACTGGGATCTATGAGCTGAGCTTATGCAAAATGGCAGATACTGGAAGCCCAGGCAT 4292
Query 660 GCAGAGAAGGAGAAGAAAAATCTTAGATACGTCAGTGGCATATGTGCGGGGAGAAGAGAACTTAGCAGGCTGGC 733
||||||..||||.||||||.||||.|||||.|||||||||||||||||||||||.||||||.||||.|||||||
Sbjct 4293 GCAGAGGCGGAGGAGAAAAGTCTTGGATACCTCAGTGGCATATGTGCGGGGAGAGGAGAACCTAGCGGGCTGGC 4366
Query 734 GGCCCCGTGGAGACAGCCTCATCCTTGAGCACCAGTGGGAGCTGGAGAAGCTGGAGCTCCTACATGAGGTGGAA 807
|.||.|||||||||||||||||.||.||.|||||||||||||||||||||||||||||.||.||||||||||||
Sbjct 4367 GACCTCGTGGAGACAGCCTCATTCTGGAACACCAGTGGGAGCTGGAGAAGCTGGAGCTGCTGCATGAGGTGGAA 4440
Query 808 AAAACCCGCCACTTTTTGCTGCTGCGTGAGAGACTTGGTGACAGCATCCCCAAATCCCTGAGCGACTCGTTATC 881
|||||.||||||||.||||||||.||.||||||||||||||||||.||||.||.||.|||||.|||||..|.||
Sbjct 4441 AAAACTCGCCACTTCTTGCTGCTTCGGGAGAGACTTGGTGACAGCGTCCCTAAGTCTCTGAGTGACTCACTGTC 4514
Query 882 CCCCAGCCTCAGCAGTGGGACCCTCAGCACCTCCACCAGTATCTCCTCTCAGATCTCAACCACTACCTTTGAAA 955
|||||||||.||||||||.|||||.||||||||||||||.|||||||||||||||||||||||.||||||||||
Sbjct 4515 CCCCAGCCTGAGCAGTGGAACCCTTAGCACCTCCACCAGCATCTCCTCTCAGATCTCAACCACCACCTTTGAAA 4588
Query 956 GCGCCATCACACCTAGCGAGAGCAGTGGCTATGATTCAGGAGACATCGAAAGCCTGGTGGACCGAGAGAAAGAG 1029
|||||||||||||.|||||||||||||||||.||.||.|.||||.|.|||||||||||.|||||.|||||||||
Sbjct 4589 GCGCCATCACACCGAGCGAGAGCAGTGGCTACGACTCGGCAGACGTTGAAAGCCTGGTCGACCGGGAGAAAGAG 4662
Query 1030 CTGGCTACCAAGTGCCTGCAACTTCTCACCCACACTTTCAACAGAGAATTCAGCCAGGTGCACGGCAGCGTCAG 1103
||||||||.|||||||||||.|||||||||||||||||||||.||||||||||||||||||||||||||.||||
Sbjct 4663 CTGGCTACAAAGTGCCTGCAGCTTCTCACCCACACTTTCAACCGAGAATTCAGCCAGGTGCACGGCAGCATCAG 4736
Query 1104 TGACTGTAAGTTGTCTGATATCTCTCCAATTGGACGGGATCCCTCTGAGTCCAGTTTCAGCAGTGCCACCCTCA 1177
||||||||||||||||||.||||||||||||||||||||.|||||||.||||||||||||||||.|||||||||
Sbjct 4737 TGACTGTAAGTTGTCTGACATCTCTCCAATTGGACGGGACCCCTCTGTGTCCAGTTTCAGCAGTTCCACCCTCA 4810
Query 1178 CTCCCTCCTCCACCTGTCCCTCTCTGGTAGACTCTAGGAGCAACTCTCTGGATCAGAAGACCCCAGAAGCCAAT 1251
|.|||||||||||.||.|||||..||||.|||||.|||||||.||||.|||||||||||||||||||||||||.
Sbjct 4811 CGCCCTCCTCCACTTGCCCCTCCTTGGTGGACTCCAGGAGCAGCTCTATGGATCAGAAGACCCCAGAAGCCAAC 4884
Query 1252 TCCCGGGCCTCTAGTCCCTGCCCAGAATTTGAACAGTTTCAGATTGTCCCAGCTGTGGAAACACCATATTTGGC 1325
||.||.|||||.||||||||||.|||||||||||||||||||||.||||||.|||||||.|||||.||||||||
Sbjct 4885 TCTCGTGCCTCCAGTCCCTGCCAAGAATTTGAACAGTTTCAGATCGTCCCAACTGTGGAGACACCCTATTTGGC 4958
Query 1326 CCGAGCAGGAAAAAACGAATTTCTCAATCTTGTTCCAGATATTGAAGAAATTAGACCAAGCTCAGTGGTCTCTA 1399
|||||||||.||.||.|||||||||||||||||||||||.|||||||||.|.|||.|..|.||||||||.||||
Sbjct 4959 CCGAGCAGGGAAGAATGAATTTCTCAATCTTGTTCCAGACATTGAAGAAGTCAGAGCGGGATCAGTGGTATCTA 5032
Query 1400 AGAAAGGATACCTTCATTTCAAGGAGCCTCTTTACAGTAACTGGGCTAAACATTTTGTTGTCGTCCGTCGGCCT 1473
|||||||||||||.||||||||.|||||.||||.|||||||||||||||||||||.|||||.||.|||||.|||
Sbjct 5033 AGAAAGGATACCTGCATTTCAAAGAGCCACTTTCCAGTAACTGGGCTAAACATTTCGTTGTGGTTCGTCGCCCT 5106
Query 1474 TATGTCTTCATCTATAACAGTGACAAAGACCCTGTGGAGCGTGGAATCATTAACCTGTCCACAGCACAGGTGGA 1547
||.|||||||||||||||||||||||||||||.||.||||||||.||||||||||||||.||||||||||||||
Sbjct 5107 TACGTCTTCATCTATAACAGTGACAAAGACCCAGTAGAGCGTGGCATCATTAACCTGTCTACAGCACAGGTGGA 5180
Query 1548 GTACAGTGAGGACCAGCAGGCCATGGTGAAGACACCAAACACATTTGCTGTCTGCACAAAGCACCGTGGGGTCC 1621
||||||.|||||||||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||
Sbjct 5181 GTACAGCGAGGACCAGCAGGCCATGGTGAAGACACCTAATACTTTTGCTGTATGCACAAAGCACCGTGGGGTCC 5254
Query 1622 TTTTGCAGGCCCTCAATGACAAAGACATGAACGACTGGTTGTATGCCTTCAACCCACTTCTAGCTGGCACAATA 1695
||.||||.||.||||||||||||||||||||.||||||||.||||||||.|||||||||||.||||||||||||
Sbjct 5255 TTCTGCAAGCTCTCAATGACAAAGACATGAATGACTGGTTATATGCCTTTAACCCACTTCTGGCTGGCACAATA 5328
Query 1696 CGGTCAAAGCTTTCCCGCAGATGCCCGAGCCAGTCGAAATAC 1737
.|||||||.||.||.||||||||||||||||||.|.||.|||
Sbjct 5329 AGGTCAAAACTCTCTCGCAGATGCCCGAGCCAGCCAAAGTAC 5370
