Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11674
- Subject:
- XM_006538593.3
- Aligned Length:
- 5328
- Identities:
- 1546
- Gaps:
- 3591
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGGGAGCCTCTGTGAAGGTCGCTGTTCGAGTGAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAGTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAACCCAAAGGAAGCACCAAAGTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGCTTTGACTACTCCTACTGGTCCCACACCTCGCCTGAAGATCCCTGTTTTGCATCGCAGAATCGTGTGTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGACATTGGAAAGGAAATGCTCTTACATGCCTTTGAAGGTTATAATGTCTGTATCTTTGCCTATGGGCAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGCTGGGAAATCCTACACGATGATGGGGAAACAAGAAGAGAGCCAAGCTGGAATCATCCCACAGTTGTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAACTCTTTGAGAAGATCAATGACAATTGTAATGAAGAAATGTCTTACTCTGTAGAGGTGAGCTACATGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTACTGTGAGAGAGTACGAGATTTACTGAATCCCAAAAACAAGGGTAACTTGCGTGTGCGTGAACACCCGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGACCCTATGTGGAGGATCTGTCCAAGCTGGCGGTCACCTCCTACACTGACATCGCTGACCTGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGGAACAAAGCCAGGACTGTGGCAGCTACCAACATGAATGAGACAAGCAGCCGTTCTCACGCTGTGTTCACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGTCTTTACCCAGAAGAAACAGGATCCTGAGACGAACCTTTCTACTGAGAAGGTCAGTAAAATCAGCTTGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATCTAGCAGGAAGTGAACGGGCTGATTCAACTGGTGCCAAAGGAACTCGATTAAAGGAAGGTGCAAATATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATAAGTCCCTTACAACTTTGGGCAAAGTCATTTCGGCCTTGGCAGAGGTGGATAACTGCACAAGCAAGAGTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAAGAAGAAAACTGATTTTATTCCTTATAGGGATTCTGTACTTACTTGGCTCCTTCGAGAAAATCTCGGTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAACTCCCGAACTGCAATGGTTGCTGCTCTGAGCCCAGCCGACATCAACTACGATGAAACTTTGAGCACACTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATACGCAGATCGTGCAAAACAAATTAAATGCAATGCTGTTATCAATGAGGACCCGAATGCCAAGCTGGTTCGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGTTGAAGGAGGAAGTGACCCGACTGAAGGACCTTCTTCGTGCTCAGGGACTGGGAGATATTATTGATACATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATGGGGTCCCTCACTTCATCTCCATCTTCATGCTCACTTAATAGTCAGGTGGGCTTAACATCTGTGACCAGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCAGGAGAGGATCATGTCTACACCTGGAGGGGAGGAAGCCATTGAACGTCTGAAGGAGTCAGAGAAGATCATT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCTGAGTTGAATGAAACCTGGGAAGAGAAACTTCGTAAAACAGAGGCCATCAGAATGGAGAGAGAAGCCTTGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCTGAGATGGGAGTTGCCATACGGGAAGATGGGGGGACACTTGGAGTTTTCTCTCCTAAAAAGACCCCACATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGTTAACCTCAATGAAGACCCATTAATGTCGGAGTGTTTGCTCTATTACATCAAGGATGGAATTACAAGGGTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCCAGGCAGATGCTGAGCGGCGCCAGGACATAGTGCTGAGTGGGGCCCACATTAAAGAGGAGCATTGTCTCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCGGAGTGAGAGGAGCAACACTGGTGAAGTTATTGTGACCTTGGAGCCCTGTGAGCGCTCAGAAACATACGTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGGCAAGAGGGTGGCTCATCCTGTTCAGCTGCGCTCAGGGAACCGTATCATCATGGGTAAAAACCATGTTTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGTTTTAACCACCCTGAACAAGCGCGAGCAGAAAGGGAAAAGACTCCCTCAGCTGAGACCCCCTCTGAGCCTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGACTGGACCTTTGCTCAGAGAGAGCTTCTCGAAAAACAAGGAATTGATATGAAACAGGAGATGGAAAAGAGGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCAGGAAATGGAGATCCTTTACAAAAAGGAGAAGGAGGAAGCCGATCTTCTCCTGGAGCAGCAGAGACTGGAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TACGAGAGTAAATTGCAGGCCTTGCAGAGGCAGGTTGAGACTCGATCTCTGGCTGCAGAGACAACGGAAGAGGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGAAGAGGAGGAGGAAGTTCCTTGGACACAGCATGAATTTGAGTTGGCCCAGTGGGCGTTCCGGAAATGGAAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCACCAGTTTACTTCATTAAGGGACTTACTCTGGGGCAATGCGGTGTACCTGAAGGAAGCCAATGCCATCAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTGGAACTAAAGAAAAAGGTGCAGTTCCAGTTTGTTCTGCTGACTGACACGCTGTACTCCCCTGTGCCTCCTGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACTGCTTCCCTCGGAGATGGAGAAGACGCACGAGGACAGACCTTTCCCTCGGACTGTGGTGGCGGTGGAGGTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGATCTGAAGAATGGAGCAACACATTATTGGTCTTTGGATAAACTCAAGCAGAGACTGGATCTGATGCGAGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATGTATGACAGGGCAGGGGAGGTGGCCTCCAGTGCCCAAGATGACAGCGAGACGACCATGACCGGCAGCGACCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTCTACGATCGGTTCCACTGGTTCAAACTTGTGGGAAGCTCCCCTATTTTCCACGGCTGTGTGAATGAGCGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTGCCGACCGCACACCCTCCCCCACTTTTTCCACGGCCGATTCCGACATCACTGAACTGGCTGACGAGCAGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GATGCCATGGAGGACTTTGATGATGAGGCATTCGTGGATGACACCGGCTCTGACGCAGGGACGGAAGAGGGATC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGAGCTCTTCAGTGATGGGCATGACCCATTTTACGACCGATCCCCTTGGTTCATTTTAGTAGGAAGGGCATTTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGTACTTGAGCAACCTGCTGTATCCGGTGCCCCTGATTCACAGGGTGGCCATTGTCAGTGAGAAGGGGGAAGTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CGGGGATTTCTTCGTGTGGCTGTGCAGGCCATTGCAGCGGATGAAGAAGCCCCTGATTATGGCTCTGGAATCCG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCAGTCGGGAACAGCTAAAATATCTTTTGATAATGAATACTTTAATCAGAGTGACTTCTCGTCAGCTGCAATGA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTCGTTCTGGTCTGTCCTTGGAGGAGCTGAGGATTGTGGAAGGTCAGGGCCAGAGTTCTGAAGTCATCAGTCCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCAGAAGAAGTCAATCGAATGAACGACCTGGATTTGAAGTCAGGCACTTTGCTGGATGGGAAGATGGTGATGGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGGGTTTTCTGAAGAGATTGGTAACCACCTGAAGCTGGGCAGTGCCTTCACTTTCCGAGTCACTGTGCTCCAAG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCAGCGGGATCCTTCCAGAGTATGCAGACATCTTCTGTCAGTTCAACTTTTTGCATCGGCATGATGAAGCGTTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCCACTGAACCCCTCAAGAACAATGGAAGAGGAAGTCCCCTGGGCTTCTACCATGTACAGAACATTGCGGTGGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGTCACAGAGTCGTTTGTGGACTACATCAAAACCAAGCCCATTGTATTCGAGGTCTTTGGGCACTACCAGCAGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACCCACTCCATCTGCAAGGACAAGATCTTAACAGTCCACCTCAGCCATCTCGGAGATTCTTCCCCCCACCCATG 3552
Query 1 ---------------------------------------ATGAGCAAAACCAGCCTTGGCCAGAGCATGAGCAA 35
||||.||||||||.||||||.||.|||||||||||
Sbjct 3553 CCACTCTCCAAGCCAGTTCCAGCTACTAAGTTAAACACCATGAACAAAACCACCCTTGGGCAAAGCATGAGCAA 3626
Query 36 GTATGACCTCCTGGTTTGGTTTGAGATCAGTGAACTGGAGCCTACAGGAGAGTATATCCCAGCTGTGGTTGACC 109
|||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||
Sbjct 3627 GTACGACCTTCTGGTTTGGTTTGAGATCAGTGAACTGGAGCCTACTGGAGAGTATATTCCAGCTGTGGTTGACC 3700
Query 110 ACACAGCAGGCTTGCCTTGCCAGGGGACATTTTTGCTTCATCAGGGCATCCAGCGAAGGATCACAGTGACCATT 183
|.||.||||||.||||.||||||||||||||||||||.||.|||||||||||||||.|||||||||||||.||.
Sbjct 3701 ATACTGCAGGCCTGCCCTGCCAGGGGACATTTTTGCTGCACCAGGGCATCCAGCGACGGATCACAGTGACTATC 3774
Query 184 ATCCATGAGAAGGGGAGCGAGCTCCATTGGAAAGATGTTCGTGAACTGGTGGTAGGTCGTATTCGGAATAAGCC 257
|||||.||||||||.||.||||||||.|||||||||||.|||||.||||||||||||||.|||.|||||||.||
Sbjct 3775 ATCCACGAGAAGGGCAGTGAGCTCCACTGGAAAGATGTCCGTGAGCTGGTGGTAGGTCGGATTAGGAATAAACC 3848
Query 258 TGAGGTGGATGAAGCTGCAGTTGATGCCATCCTCTCCCTAAATATTATTTCTGCCAAGTACCTGAAGTCTTCCC 331
.|||||.||||||||||||||||||||..|.||.|||||.||.||.||.|||||.||||.|||||||.||.|||
Sbjct 3849 GGAGGTAGATGAAGCTGCAGTTGATGCTGTTCTTTCCCTGAACATCATCTCTGCTAAGTCCCTGAAGGCTGCCC 3922
Query 332 ACAACTCTAGCAGGACCTTCTACCGCTTTGAGGCTGTGTGGGATAGCTCTCTGCATAACTCCCTTCTTCTGAAC 405
|||.|||.|||||||||||||||||.||.|||||.||.|||||.|||||.||.|||||||||||.|||||||||
Sbjct 3923 ACAGCTCCAGCAGGACCTTCTACCGTTTCGAGGCAGTATGGGACAGCTCCCTACATAACTCCCTCCTTCTGAAC 3996
Query 406 CGAGTGACACCCTATGGAGAAAAGATCTACATGACCTTGTCGGCCTACCTAGAGCTGGATCATTGCATCCAGCC 479
||||||||||||||||||||||||||||||||||||||.||.||.||.||.|||.|||||||||||||||||||
Sbjct 3997 CGAGTGACACCCTATGGAGAAAAGATCTACATGACCTTATCTGCTTATCTGGAGTTGGATCATTGCATCCAGCC 4070
Query 480 GGCTGTCATCACCAAGGATGTGTGCATGGTCTTCTACTCCCGAGATGCCAAGATCTCACCACCACGCTCTCTGC 553
|||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||.|||||||
Sbjct 4071 GGCCGTCATCACTAAGGATGTGTGCATGGTCTTCTATTCCCGAGATGCCAAGATCTCACCACCGCGTTCTCTGC 4144
Query 554 GTAGCCTCTTTGGCAGCGGCTACTCAAAGTCACCAGATTCGAATCGAGTCACTGGCATTTACGAACTCAGCTTA 627
|.|.|||||||||.||.||||||||||||||||||||.||.||.|||||.|||||.||.||.||.||.||||||
Sbjct 4145 GAAACCTCTTTGGTAGTGGCTACTCAAAGTCACCAGACTCCAACCGAGTGACTGGGATCTATGAGCTGAGCTTA 4218
Query 628 TGCAAAATGTCAGACACAGGTAGTCCAGGTATGCAGAGAAGGAGAAGAAAAATCTTAGATACGTCAGTGGCATA 701
|||||||||.||||.||.||.||.|||||.||||||||..||||.||||||.||||.|||||.|||||||||||
Sbjct 4219 TGCAAAATGGCAGATACTGGAAGCCCAGGCATGCAGAGGCGGAGGAGAAAAGTCTTGGATACCTCAGTGGCATA 4292
Query 702 TGTGCGGGGAGAAGAGAACTTAGCAGGCTGGCGGCCCCGTGGAGACAGCCTCATCCTTGAGCACCAGTGGGAGC 775
||||||||||||.||||||.||||.||||||||.||.|||||||||||||||||.||.||.|||||||||||||
Sbjct 4293 TGTGCGGGGAGAGGAGAACCTAGCGGGCTGGCGACCTCGTGGAGACAGCCTCATTCTGGAACACCAGTGGGAGC 4366
Query 776 TGGAGAAGCTGGAGCTCCTACATGAGGTGGAAAAAACCCGCCACTTTTTGCTGCTGCGTGAGAGACTTGGTGAC 849
||||||||||||||||.||.|||||||||||||||||.||||||||.||||||||.||.|||||||||||||||
Sbjct 4367 TGGAGAAGCTGGAGCTGCTGCATGAGGTGGAAAAAACTCGCCACTTCTTGCTGCTTCGGGAGAGACTTGGTGAC 4440
Query 850 AGCATCCCCAAATCCCTGAGCGACTCGTTATCCCCCAGCCTCAGCAGTGGGACCCTCAGCACCTCCACCAGTAT 923
|||.||||.||.||.|||||.|||||..|.|||||||||||.||||||||.|||||.||||||||||||||.||
Sbjct 4441 AGCGTCCCTAAGTCTCTGAGTGACTCACTGTCCCCCAGCCTGAGCAGTGGAACCCTTAGCACCTCCACCAGCAT 4514
Query 924 CTCCTCTCAGATCTCAACCACTACCTTTGAAAGCGCCATCACACCTAGCGAGAGCAGTGGCTATGATTCAGGAG 997
|||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||.||.||.|.||
Sbjct 4515 CTCCTCTCAGATCTCAACCACCACCTTTGAAAGCGCCATCACACCGAGCGAGAGCAGTGGCTACGACTCGGCAG 4588
Query 998 ACATCGAAAGCCTGGTGGACCGAGAGAAAGAGCTGGCTACCAAGTGCCTGCAACTTCTCACCCACACTTTCAAC 1071
||.|.|||||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 4589 ACGTTGAAAGCCTGGTCGACCGGGAGAAAGAGCTGGCTACAAAGTGCCTGCAGCTTCTCACCCACACTTTCAAC 4662
Query 1072 AGAGAATTCAGCCAGGTGCACGGCAGCGTCAGTGACTGTAAGTTGTCTGATATCTCTCCAATTGGACGGGATCC 1145
.||||||||||||||||||||||||||.||||||||||||||||||||||.||||||||||||||||||||.||
Sbjct 4663 CGAGAATTCAGCCAGGTGCACGGCAGCATCAGTGACTGTAAGTTGTCTGACATCTCTCCAATTGGACGGGACCC 4736
Query 1146 CTCTGAGTCCAGTTTCAGCAGTGCCACCCTCACTCCCTCCTCCACCTGTCCCTCTCTGGTAGACTCTAGGAGCA 1219
|||||.||||||||||||||||.||||||||||.|||||||||||.||.|||||..||||.|||||.|||||||
Sbjct 4737 CTCTGTGTCCAGTTTCAGCAGTTCCACCCTCACGCCCTCCTCCACTTGCCCCTCCTTGGTGGACTCCAGGAGCA 4810
Query 1220 ACTCTCTGGATCAGAAGACCCCAGAAGCCAATTCCCGGGCCTCTAGTCCCTGCCCAGAATTTGAACAGTTTCAG 1293
.||||.|||||||||||||||||||||||||.||.||.|||||.||||||||||.|||||||||||||||||||
Sbjct 4811 GCTCTATGGATCAGAAGACCCCAGAAGCCAACTCTCGTGCCTCCAGTCCCTGCCAAGAATTTGAACAGTTTCAG 4884
Query 1294 ATTGTCCCAGCTGTGGAAACACCATATTTGGCCCGAGCAGGAAAAAACGAATTTCTCAATCTTGTTCCAGATAT 1367
||.||||||.|||||||.|||||.|||||||||||||||||.||.||.|||||||||||||||||||||||.||
Sbjct 4885 ATCGTCCCAACTGTGGAGACACCCTATTTGGCCCGAGCAGGGAAGAATGAATTTCTCAATCTTGTTCCAGACAT 4958
Query 1368 TGAAGAAATTAGACCAAGCTCAGTGGTCTCTAAGAAAGGATACCTTCATTTCAAGGAGCCTCTTTACAGTAACT 1441
|||||||.|.|||.|..|.||||||||.|||||||||||||||||.||||||||.|||||.||||.||||||||
Sbjct 4959 TGAAGAAGTCAGAGCGGGATCAGTGGTATCTAAGAAAGGATACCTGCATTTCAAAGAGCCACTTTCCAGTAACT 5032
Query 1442 GGGCTAAACATTTTGTTGTCGTCCGTCGGCCTTATGTCTTCATCTATAACAGTGACAAAGACCCTGTGGAGCGT 1515
|||||||||||||.|||||.||.|||||.|||||.|||||||||||||||||||||||||||||.||.||||||
Sbjct 5033 GGGCTAAACATTTCGTTGTGGTTCGTCGCCCTTACGTCTTCATCTATAACAGTGACAAAGACCCAGTAGAGCGT 5106
Query 1516 GGAATCATTAACCTGTCCACAGCACAGGTGGAGTACAGTGAGGACCAGCAGGCCATGGTGAAGACACCAAACAC 1589
||.||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||
Sbjct 5107 GGCATCATTAACCTGTCTACAGCACAGGTGGAGTACAGCGAGGACCAGCAGGCCATGGTGAAGACACCTAATAC 5180
Query 1590 ATTTGCTGTCTGCACAAAGCACCGTGGGGTCCTTTTGCAGGCCCTCAATGACAAAGACATGAACGACTGGTTGT 1663
.||||||||.||||||||||||||||||||||||.||||.||.||||||||||||||||||||.||||||||.|
Sbjct 5181 TTTTGCTGTATGCACAAAGCACCGTGGGGTCCTTCTGCAAGCTCTCAATGACAAAGACATGAATGACTGGTTAT 5254
Query 1664 ATGCCTTCAACCCACTTCTAGCTGGCACAATACGGTCAAAGCTTTCCCGCAGATGCCCGAGCCAGTCGAAATAC 1737
|||||||.|||||||||||.||||||||||||.|||||||.||.||.||||||||||||||||||.|.||.|||
Sbjct 5255 ATGCCTTTAACCCACTTCTGGCTGGCACAATAAGGTCAAAACTCTCTCGCAGATGCCCGAGCCAGCCAAAGTAC 5328
