Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11704
- Subject:
- XM_005258095.3
- Aligned Length:
- 6189
- Identities:
- 972
- Gaps:
- 5208
Alignment
Query 1 ATGCCCAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTGACAGTGACAGCAATATGGTAGAGAAACC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCCAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTGACAGTGACAGCAATATGGTAGAGAAACC 74
Query 75 ATATGGAAGAAAGAGTAAAGACAAGATTGCATCCTACAGCAAAACTCCAAAAATTGAACGAAGTGATGTGAGCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATATGGAAGAAAGAGTAAAGACAAGATTGCATCCTACAGCAAAACTCCAAAAATTGAACGAAGTGATGTGAGCA 148
Query 149 AGGAGATGAAAGAGAAATCATCCATGAAACGTAAACTTCCTTTTACTATTAGCCCATCAAGAAATGAAGAACGA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGAGATGAAAGAGAAATCATCCATGAAACGTAAACTTCCTTTTACTATTAGCCCATCAAGAAATGAAGAACGA 222
Query 223 GATTCAGACACAGATTCAGATCCAGGACATACAAGTGAAAATTGGGGGGAGAGACTTATATCTTCTTACAGGAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GATTCAGACACAGATTCAGATCCAGGACATACAAGTGAAAATTGGGGGGAGAGACTTATATCTTCTTACAGGAC 296
Query 297 ATACTCAGAGAAAGAAGGTCCAGAAAAGAAGAAGACAAAAAAGGAAGCTGGAAATAAGAAATCCACACCAGTTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATACTCAGAGAAAGAAGGTCCAGAAAAGAAGAAGACAAAAAAGGAAGCTGGAAATAAGAAATCCACACCAGTTA 370
Query 371 GCATTCTTTTTGGTTATCCACTCTCTGAGCGAAAACAGATGGCACTTCTTATGCAGATGACAGCAAGAGACAAC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCATTCTTTTTGGTTATCCACTCTCTGAGCGAAAACAGATGGCACTTCTTATGCAGATGACAGCAAGAGACAAC 444
Query 445 AGTCCAGATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCTTCATCTCG 518
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 A------ATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCTTCATCTCG 512
Query 519 ACAGAAAGATAAAGTTAATAAAAGAAATGAACGTGGTGAAACTCCTTTACACATGGCTGCTATTCGAGGAGATG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 ACAGAAAGATAAAGTTAATAAAAGAAATGAACGTGGTGAAACTCCTTTACACATGGCTGCTATTCGAGGAGATG 586
Query 593 TGAAACAAGTTAAAGAATTAATAAGTTTAGGGGCAAATGTGAATGTGAAAGATTTTGCAGGTTGGACACCACTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TGAAACAAGTTAAAGAATTAATAAGTTTAGGGGCAAATGTGAATGTGAAAGATTTTGCAGGTTGGACACCACTG 660
Query 667 CATGAAGCTTGCAATGTTGGATATTACGATGTTGCTAAGATACTTATAGCAGCTGGAGCAGATGTTAACACACA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CATGAAGCTTGCAATGTTGGATATTACGATGTTGCTAAGATACTTATAGCAGCTGGAGCAGATGTTAACACACA 734
Query 741 AGGATTAGATGATGACACTCCACTCCATGATTCTGCTAGTAGTGGGCACAGAGATATAGTAAAGCTGTTACTTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AGGATTAGATGATGACACTCCACTCCATGATTCTGCTAGTAGTGGGCACAGAGATATAGTAAAGCTGTTACTTC 808
Query 815 GTCACGGTGGAAATCCATTTCAAGCTAATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 GTCACGGTGGAAATCCATTTCAAGCTAATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTG 882
Query 889 GAGTTGCTACTAAAAAGAGAGGTGCCTTTATCTGATGATGATGAAAGTTACACAGGATCC-----AGCTACCAA 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||..||| .||| |||
Sbjct 883 GAGTTGCTACTAAAAAGAGAGGTGCCTTTATCTGATGATGATGAAAGTTACACAGATTCCGAAGAGGCT--CAA 954
Query 958 T------------------TTGCAGGAAA----TGCC-------------AAG-----CTCAGCGGAGCAAGT- 990
| ||| |.|||| ||.| ||| ||||.|.|.|.||||
Sbjct 955 TCTGTAAATCCTTCTAGTGTTG-ATGAAAATATTGACTCTGAAACAGAGAAAGACTCTCTCATCTGTGAAAGTA 1027
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1028 AACAGATACTTCCCAGTAAAACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGAA 1101
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1102 GAAATTAATAAGATGATTGATGATAGGCATATTCTTAGGAAAGAACAACGAAAAGAAAATGAACCTGAAGCAGA 1175
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1176 AAAAACTCATTTATTTGCAAAACAGGAGAAAGCCTTCTATCCTAAATCATTTAAAAGTAAAAAACAAAAGCCAT 1249
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1250 CTAGGGTCTTATATTCAAGTACTGAAAGTTCTGATGAAGAAGCTCTTCAGAATAAAAAGATTTCTACTTCATGT 1323
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1324 TCCGTCATCCCTGAAACATCAAATTCTGATATGCAAACCAAAAAGGAATATGTAGTTTCAGGTGAACACAAACA 1397
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1398 GAAAGGCAAAGTTAAAAGAAAATTGAAAAATCAGAATAAAAATAAAGAGAACCAAGAGCTAAAGCAAGAAAAGG 1471
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1472 AAGGAAAAGAAAATACAAGAATAACAAACTTGACAGTAAATACTGGACTAGATTGTTCAGAAAAGACCAGAGAG 1545
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1546 GAGGGGAACTTTAGGAAATCTTTTAGCCCAAAAGATGATACTTCATTACATTTATTTCATATTTCCACTGGTAA 1619
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1620 ATCTCCCAAACATTCTTGTGGATTAAGTGAAAAACAGTCAACACCACTAAAACAAGAACATACTAAAACATGTT 1693
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1694 TATCACCAGGAAGTTCTGAAATGTCATTACAGCCTGATCTTGTTCGGTATGATAATACAGAATCTGAATTCTTG 1767
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1768 CCAGAAAGTTCAAGTGTAAAATCTTGTAAGCATAAGGAAAAAAGCAAACATCAGAAAGATTTCCACTTAGAATT 1841
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1842 TGGTGAAAAATCAAATGCCAAAATAAAGGATGAAGATCATAGTCCAACATTTGAAAATTCAGATTGCACACTGA 1915
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1916 AAAAAATGGATAAAGAAGGTAAAACATTAAAAAAACATAAATTGAAGCATAAAGAGAGGGAAAAAGAAAAGCAT 1989
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1990 AAAAAAGAAATTGAAGGTGAAAAGGAAAAATACAAAACTAAGGATAGTGCCAAAGAACTGCAGAGGAGTGTGGA 2063
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2064 ATTTGATAGAGAATTTTGGAAAGAGAATTTTTTTAAAAGTGATGAAACTGAAGATCTCTTTTTAAATATGGAAC 2137
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2138 ATGAATCCTTAACATTAGAAAAAAAATCAAAATTGGAAAAAAACATCAAAGATGATAAATCAACCAAGGAAAAG 2211
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2212 CATGTGTCAAAAGAGAGGAACTTTAAAGAGGAACGAGACAAGATTAAAAAGGAAAGCGAGAAATCTTTTAGGGA 2285
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2286 GGAAAAAATAAAAGATCTAAAAGAAGAGAGAGAAAACATACCCACAGATAAAGACTCAGAATTTACTTCTTTGG 2359
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2360 GTATGAGTGCCATTGAGGAATCTATAGGGCTTCATTTAGTGGAAAAGGAAATAGACATTGAAAAACAAGAAAAG 2433
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2434 CATATAAAGGAAAGTAAAGAAAAACCTGAGAAGCGATCTCAAATTAAAGAAAAGGACATTGAGAAGATGGAAAG 2507
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2508 AAAAACCTTTGAAAAAGAAAAGAAGATAAAACATGAGCATAAGTCAGAAAAAGACAAATTAGATCTTAGTGAAT 2581
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2582 GTGTTGATAAAATAAAAGAAAAGGACAAGCTATATTCGCATCACACAGAAAAATGCCATAAAGAAGGTGAGAAG 2655
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2656 AGCAAAAATACTGCTGCTATTAAAAAAACTGACGACAGAGAGAAAAGTAGAGAAAAGATGGATAGGAAACATGA 2729
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2730 CAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAAAGCACTTGATGGAGAAAAAAAATAAAC 2803
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2804 AATCAGATAATAGTGAATACAGTAAATCAGAAAAAGGCAAAAATAAAGAAAAAGACAGGGAGCTAGATAAAAAG 2877
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2878 GAAAAATCTAGAGATAAAGAAAGTATAAATATAACTAACTCCAAACACATACAGGAAGAAAAAAAATCAAGTAT 2951
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2952 AGTAGACGGTAATAAAGCACAACATGAAAAACCCTTATCCCTTAAAGAAAAAACAAAAGATGAACCTTTGAAAA 3025
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3026 CTCCAGATGGAAAAGAAAAAGATAAAAAAGATAAAGATATAGATAGATACAAAGAACGAGACAAACATAAAGAT 3099
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3100 AAAATTCAAATAAATAGCTTACTCAAACTAAAATCTGAAGCAGATAAGCCTAAACCTAAGTCATCACCAGCATC 3173
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3174 AAAAGATACCCGACCTAAAGAAAAGAGGTTAGTGAATGATGATTTAATGCAGACAAGTTTTGAACGAATGCTAA 3247
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3248 GCCTTAAAGACCTAGAAATAGAACAGTGGCACAAAAAACATAAGGAAAAAATTAAGCAAAAAGAAAAGGAACGG 3321
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3322 TTGAGAAACCGAAACTGTTTAGAACTTAAAATAAAAGATAAAGAAAAAACAAAGCATACACCAACTGAATCCAA 3395
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3396 AAATAAAGAACTTACTAGGTCAAAGAGTTCAGAAGTGACTGATGCATATACCAAGGAGAAACAACCTAAAGATG 3469
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3470 CTGTAAGTAACAGATCACAATCTGTTGACACCAAAAATGTAATGACTTTAGGGAAGTCATCTTTTGTTTCAGAT 3543
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3544 AATAGCTTAAACAGGTCTCCTAGATCAGAAAATGAAAAGCCGGGTCTCAGCTCCAGATCTGTATCCATGATTTC 3617
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3618 TGTTGCTAGTTCAGAAGATTCCTGCCATACTACAGTGACAACCCCAAGGCCTCCAGTTGAGTATGACTCTGACT 3691
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3692 TTATGTTAGAGAGTTCAGAATCCCAAATGTCCTTTTCCCAGTCACCTTTTTTGTCAATTGCCAAATCTCCTGCT 3765
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3766 CTTCATGAAAGGGAATTGGACAGCCTGGCTGACTTGCCGGAGCGGATTAAACCACCATATGCAAACAGACTTTC 3839
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3840 AACATCCCATCTTAGGTCATCTTCTGTAGAAGATGTTAAACTAATTATAAGCGAGGGGAGACCTACCATAGAAG 3913
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3914 TTCGAAGATGTAGCATGCCTTCTGTCATTTGTGAACATACCAAACAATTCCAAACAATATCAGAAGAGAGCAAT 3987
Query 991 -------------------------------------------------------------------------- 990
Sbjct 3988 CAAGGTAGCTTATTAACTGTGCCAGGAGATACTAGTCCTTCTCCCAAACCTGAGGTATTCTCAAATGTGCCTGA 4061
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4062 AAGAGACCTTTCAAATGTATCTAACATACATTCCAGTTTTGCAACTTCTCCAACTGGAGCTTCAAACAGCAAGT 4135
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4136 ATGTTTCAGCTGATAGAAATCTCATCAAGAATACTGCCCCAGTGAACACTGTAATGGACAGTCCAGTGCATTTA 4209
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4210 GAGCCATCTAGTCAGGTTGGTGTGATCCAGAATAAATCATGGGAGATGCCTGTTGATAGACTAGAGACATTAAG 4283
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4284 CACCAGAGACTTTATCTGCCCAAATTCTAACATACCTGATCAAGAATCCTCTCTTCAGAGTTTTTGTAATTCTG 4357
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4358 AAAATAAGGTATTGAAAGAAAATGCTGATTTTTTATCCCTGCGCCAGACTGAACTGCCAGGAAACTCTTGTGCT 4431
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4432 CAGGATCCGGCATCCTTTATGCCTCCACAGCAGCCTTGCTCTTTCCCCAGCCAATCACTTTCAGATGCTGAATC 4505
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4506 GATTTCTAAACATATGTCTTTGTCATATGTTGCTAATCAAGAGCCAGGTATTTTACAACAAAAAAATGCAGTTC 4579
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4580 AGATTATTAGTTCTGCTTTAGATACTGATAATGAATCTACAAAAGATACAGAAAATACTTTTGTCCTAGGAGAT 4653
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4654 GTTCAAAAAACAGATGCCTTTGTCCCAGTGTACTCTGACAGCACTATTCAAGAAGCATCACCAAACTTTGAGAA 4727
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4728 AGCTTATACTTTACCTGTGTTACCATCAGAAAAGGACTTTAATGGAAGTGATGCCTCTACCCAGCTAAATACAC 4801
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4802 ATTATGCATTTAGCAAACTAACTTACAAGTCTTCCAGTGGCCATGAAGTTGAGAATAGCACAACTGATACTCAG 4875
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4876 GTCATTTCACATGAAAAAGAAAACAAACTGGAGAGTTTGGTTTTAACTCATTTGAGTAGGTGTGATTCTGATTT 4949
Query 991 -------------------------------------------------------------------------- 990
Sbjct 4950 ATGTGAAATGAATGCAGGGATGCCAAAAGGAAACCTAAATGAACAAGATCCAAAACATTGTCCTGAAAGTGAAA 5023
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5024 AGTGTTTGCTTTCCATAGAAGATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGGAAAACCATTCACAGCAG 5097
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5098 TCAACTCAACCAGAAATGCATAAATATGGTCAGTTAGTTAAAGTAGAATTAGAAGAAAATGCCGAAGATGATAA 5171
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5172 AACTGAAAACCAAATCCCTCAAAGAATGACTAGAAACAAAGCAAATACAATGGCAAATCAAAGCAAACAGATTC 5245
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5246 TTGCTAGCTGTACACTATTATCAGAAAAAGACAGTGAATCCTCATCTCCTAGAGGAAGAATAAGATTAACTGAA 5319
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5320 GATGACGATCCTCAAATTCACCATCCACGGAAAAGGAAAGTGTCACGTGTACCTCAGCCTGTGCAAGTGAGTCC 5393
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5394 CTCTTTACTACAAGCAAAAGAGAAAACTCAGCAATCTCTGGCAGCCATTGTAGATTCTCTAAAACTAGATGAGA 5467
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5468 TTCAGCCATACAGTTCAGAGAGAGCAAATCCATATTTTGAATACTTGCACATAAGGAAAAAAATAGAAGAAAAA 5541
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5542 CGCAAATTACTGTGTAGTGTGATTCCTCAAGCACCTCAGTACTATGACGAATATGTAACATTTAACGGATCATA 5615
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5616 TCTCCTGGATGGAAACCCCTTAAGCAAGATTTGTATTCCCACAATTACACCACCACCTTCACTGTCAGATCCAC 5689
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5690 TTAAAGAGCTTTTTCGACAACAGGAAGTTGTAAGGATGAAACTACGTTTGCAACACAGTATTGAAAGGGAAAAA 5763
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5764 CTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTTCATTACAGAGCTGCAAGAACATTGGCAAATCAAACACT 5837
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5838 GCCATTTAGTGCTTGTACTGTTTTGCTGGATGCCGAAGTATACAATGTACCATTGGACTCTCAGTCTGATGACA 5911
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5912 GTAAAACTTCTGTGAGGGATCGCTTTAATGCAAGACAATTCATGTCTTGGTTACAAGATGTGGATGATAAATTT 5985
Query 991 -------------------------------------------------------------------------- 990
Sbjct 5986 GACAAATTAAAGACCTGTCTTTTAATGAGGCAACAACATGAAGCTGCGGCTTTAAATGCTGTCCAGAGGTTAGA 6059
Query 991 -------------------------------------------------------------------------- 990
Sbjct 6060 ATGGCAGCTCAAACTCCAGGAACTTGATCCTGCCACCTATAAATCTATCAGCATTTACGAAATCCAGGAGTTTT 6133
Query 991 ----------------------------------------------- 990
Sbjct 6134 ATGTTCCCCTTGTTGATGTTAACGACGACTTTGAATTGACTCCTATA 6180
