Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11705
- Subject:
- NM_144531.3
- Aligned Length:
- 2342
- Identities:
- 589
- Gaps:
- 1681
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAATTGAGCGGCGGAGGCGGCGGCCCCGGCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCGGGAGCTGCGACCAGCGCCTCGGCAGCAGCGGTGACGGTGGCTGACTCGGCAGTGGCGACCATGGAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATCAGCACGGAGCTCAAGTGCTCCTGCGGGAGGAAGTGGTCCAGCTTCAAGAGGAAGTGCACCTTCTCCGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGAAGGAAATGCTGGCGAAGGACCTGGAGGAGTCACAGGGCGGCAAGTGCTCTGAGGTCCTCTCAGCCACTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCTCCGGGTGCAGCTGGTACAGAAGGAGCAGGAACTGGCCAGAGCCAAAGAAGCCTTGCAAGCCATGAAAGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACCGGAAGCGCTTAAAGGGCGAGAAGACTGACCTGGTGAGCCAGATGCAGCAGCTGTACGCCACGCTGGAGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGCGAGGAGCAGTTGCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGTGAAGACGCAGTCAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACTGGCCAAGGAGAAGGACCTGCTGGAGCGAGAGAAGTGGGAGCTTCGACGGCAGGCCAAGGAAGCCACAGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATGCTGCGGCCCTGCGCTCCCAGCTGGACCTCAAGGACAACCGCATGAAGGAGCTGGAGGCGGAGCTCGCCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCCAAGCAGTCCTTAGCCACTCTGACCAAGGATGTCCCCAAGAGGCATTCCCTCGCCATGCCCGGTGAGACGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTCAATGGCAACCAGGAATGGGTGGTGCAGGCTGACCTCCCACTGACTGCTGCCATCCGGCAAAGCCAACAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTCTCTACCACTCACACCCTCCCCACCCTGCAGACCGGCAAGTCAGGGTGAGCCCCTGCCACTCAAGACAGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCGTCATCTCTGATGCTTCTGCTGCTGAAGGTGACCGGTCATCTACACCAAGCGACATCAACTCCCCAAGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCGGACACACTCCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAGCCTACACAACCCTATTGTACAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCACTAGAGGATCTTGAAGACCAAAAACGGAAAAAGAAGAAGGAGAAGATGGGATTCGGCTCCATCTCTCGAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCGCCAGAGGGAAGCAACGGAAGTCCCTCGACCCGGGCCTCTTTGATGACTCCGACAGCCAGTGCAGCCCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACGCCACAGCCTCAGCCTGTCTGAGGGAGAGGAGCAGATGGACCGTCTGCAGCACGTGGAGCTGGTGAGGACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACGCCCATGTCGCACTGGAAGGCTGGCACAGTGCAGGCCTGGCTGGAGGTGGTGATGGCCATGCCCATGTACGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAAGGCCTGTGCAGAAAATGTCAAGAGTGGGAAGGTGCTTCTCAGCCTGAGTGACGAGGACCTGGAGTTGGGCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGGGAGTGTGCAGCTCCTTGCACAGGCGCAAGCTCCGCCTGGCCATTGAGGACTACCGAGATGCTGAGGCAGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGCAGCCTGTCCAAAGCTGCCGACCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCTGTC 1628
Query 1 -------------------------------------------ATGCTGAATTCCCTGATGAAGCGAGACCTGG 31
|||||||||||.|||||||||||.|||||||
Sbjct 1629 CCAGTATTCCCAGGCCTTCCAGAACCACCTGGTTGATGGGAGGATGCTGAATTCACTGATGAAGCGGGACCTGG 1702
Query 32 AGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTG 105
||||.|||||||||||||||||||||||||||||.||.||||||.|||||||.||.||||||||||||||||||
Sbjct 1703 AGAAACACCTGAACGTGTCCAAGAAGTTCCACCAAGTTAGCATCTTGCTGGGAATTGAGCTGCTGTACCAAGTG 1776
Query 106 AACTTCAGCAGGGAGGCCCTCCAGGAGCGCCGGGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGAC 179
|||||||||||||||||.||||||||||||.|.||||||||.||.||.|||||||..|||||.|||||.|||||
Sbjct 1777 AACTTCAGCAGGGAGGCTCTCCAGGAGCGCAGAGCCCGCTGTGAAACACAGAACACAGACCCTGTGGTCTGGAC 1850
Query 180 CAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCG 253
||||||||||||||||||||||||.||.||.|||||||||||||||||.|||||||||||||||||.|||||.|
Sbjct 1851 CAACCAGCGGGTGCTCAAGTGGGTGCGCGATATCGACCTGAAGGAGTATGCAGACAACCTGACCAATAGCGGTG 1924
Query 254 TCCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGT 327
|||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct 1925 TCCATGGTGCTGTGCTGGTCCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACCGCCCTGGGCATCCCCAGC 1998
Query 328 GGGAAGCACATCCTCCGGAGACACCTGGCAGAGGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGCAT 401
|||||||||||.|||.||||||||||||||||||||||||||.||.|||||||.|||.||||||||||||||||
Sbjct 1999 GGGAAGCACATACTCAGGAGACACCTGGCAGAGGAGATGAGCACCATCTTCCATCCATCCAACTCCACAGGCAT 2072
Query 402 CCGGGAGGCTGAGCGTTTTGGAACGCCCCCTGGCAGGGCCTCCAGCGTCACGCGGACAG-GAAAGGAG-GAGAA 473
|||||||.|||||||.|||||.||.||.||||||||||||||.|||.|||| ||| |...|||| |||.|
Sbjct 2073 CCGGGAGTCTGAGCGCTTTGGGACACCACCTGGCAGGGCCTCTAGCATCAC-----CAGAGCTGGGAGAGAGGA 2141
Query 474 CAGCAGCGG---TCTCAAGTACAAGGCTGGCCGGCTGCCCCTGGGGAAGATAGGAAGGGGCTTCAGCAGCAAAG 544
|||..|.|| |..||||.|||..|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2142 CAGTGGGGGCAATAGCAAGCACAGAGCTGGCCGGCTGCCCCTGGGGAAGATAGGAAGGGGCTTCAGCAGCAAAG 2215
Query 545 ATCCCGATTTCCATGATGACTATGGCTCTCTTCAAAACGAAGATTGCGGAGACGATGACCCCCAGAGCAGGCTG 618
|.|||||||||||||||||||||||||||||..|.|||||.||.||.||.||.||.||||.|||..||||||.|
Sbjct 2216 AGCCCGATTTCCATGATGACTATGGCTCTCTGGAGAACGAGGACTGTGGGGATGAGGACCTCCAAGGCAGGCCG 2289
Query 619 GAACAGTGCCGTCTGGAAGGCTACAACAGCCTGGAGGTCACCAACGTG 666
|||||||||||||||||.||.|||..||||.|||||||||||||.|||
Sbjct 2290 GAACAGTGCCGTCTGGAGGGATACGGCAGCTTGGAGGTCACCAATGTG 2337
